RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ABCG2Q9UNQ0 655 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 DLGAP4Q9Y2H0 992 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 AP3M1Q9Y2T2 418 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 PMF1-BGLAPU3KQ54 211 aa12.93□□□□□ -0.34
SLC28A1-201ENST00000286749 A0A096LPI6 279 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 PER2O15055 1255 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 COQ9O75208 318 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ERN1O75460 977 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ALDH2P05091 517 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 BMP4P12644 408 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 BMP1P13497 986 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ATF6P18850 670 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 CORO1AP31146 461 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 S100A3P33764 101 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 CDKN2CP42773 168 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 MASP1P48740 699 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 CLK3P49761 638 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 GPR17Q13304 367 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 INAQ16352 499 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 TRIM71Q2Q1W2 868 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 PAGE2BQ5JRK9 111 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ADCK1Q86TW2 530 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 MFSD4AQ8N468 514 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 SETD9Q8NE22 299 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ACPTQ9BZG2 426 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 KCNH6Q9H252 994 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 GKN1Q9NS71 199 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ASIC5Q9NY37 505 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 LHX3Q9UBR4 397 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 TRPS1Q9UHF7 1281 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 SCN8AQ9UQD0 1980 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 MICAL3Q7RTP6 2002 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 MYO1GB0I1T2 1018 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 M0QX08 132 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 WDR47O94967 919 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 DIRAS1O95057 198 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 PARNO95453 639 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 EBLN1P0CF75 366 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 IRF1P10914 325 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 EPB42P16452 691 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 DGKAP23743 735 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 PSMB9P28065 219 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 CTGFP29279 349 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 HMGCLP35914 325 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 RPS14P62263 151 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 DNASE1L3Q13609 305 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 CPSF6Q16630 551 aaKnown RBP eCLIP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 SMN1Q16637 294 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 LRIF1Q5T3J3 769 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 CXorf57Q6NSI4 855 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 C17orf99Q6UX52 265 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 CERS6Q6ZMG9 384 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 P2RY8Q86VZ1 359 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 TMEM132CQ8N3T6 1108 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 YIPF6Q96EC8 236 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 REXO5Q96IC2 774 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ASB8Q9H765 288 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 PARVBQ9HBI1 364 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 NECTIN3Q9NQS3 549 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 WDR37Q9Y2I8 494 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 TPRKBQ9Y3C4 175 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 A0A1B0GVM2 712 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 GAPDHSO14556 408 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 FADS2O95864 444 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 MT-ND2P03891 347 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 IL1RNP18510 177 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ACVR2AP27037 513 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 DAPP51397 102 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 HUNKP57058 714 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 NCS1P62166 190 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC35A2P78381 396 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC14A1Q13336 389 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ARHGEF7Q14155 803 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 GBX1Q14549 363 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 DGUOKQ16854 277 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 PGS1Q32NB8 556 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF551Q7Z340 670 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 GALNT10Q86SR1 603 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 RBFAQ8N0V3 343 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ZBTB2Q8N680 514 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 USP7Q93009 1102 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF641Q96N77 438 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 TSSK3Q96PN8 268 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 MYOCQ99972 504 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 NTMT1Q9BV86 223 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 DUSP21Q9H596 190 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 SH3BP1Q9Y3L3 701 aa12.92□□□□□ -0.34
SLC28A1-201ENST00000286749 SCAMP3O14828 347 aaKnown RBP12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 ADAMTS4O75173 837 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 LRATO95237 230 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 PDYNP01213 254 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 C1QCP02747 245 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 RPS3P23396 243 aaKnown RBP eCLIP12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 PTPN6P29350 595 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 MAGEA2P43356 314 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 RHOAP61586 193 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 CLCA4Q14CN2 919 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms