RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CNOT10Q9H9A5 744 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 RPF1Q9H9Y2 349 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 KCNK9Q9NPC2 374 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 AKIP1Q9NQ31 210 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 PPANQ9NQ55 473 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 SLC2A4RGQ9NR83 387 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 BARHL2Q9NY43 387 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 ABI3Q9P2A4 366 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 IL17BQ9UHF5 180 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 SLC23A1Q9UHI7 598 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 DDX25Q9UHL0 483 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 FBXW11Q9UKB1 542 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 TSPAN16Q9UKR8 245 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 RAB21Q9UL25 225 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 CDC14AQ9UNH5 594 aa4.49□□□□□ -1.69
CD44-202ENST00000278385 EXO1Q9UQ84 846 aaKnown RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 ZNF646O15015 1829 aaPredicted RBP4.49□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3DA0A087WVF3 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3IA0A087WXS9 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3EA0A087X179 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3KA0A087X1G2 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TCRBV7S2A1N4TA0A589 114 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3BA6NDS4 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3FA6NER0 549 aaPredicted RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3LB9A6J9 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 YKT6O15498 198 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TTI1O43156 1089 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 HCRTR2O43614 444 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TLX2O43763 284 aaPredicted RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 NME6O75414 186 aaPredicted RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 ECI2O75521 394 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 HAUS5O94927 633 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CH25HO95992 272 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 BCL10O95999 233 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 LCATP04180 440 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 YES1P07947 543 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CHRM4P08173 479 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CYP3A4P08684 503 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3HP0C7X1 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 EPB41P11171 864 aaKnown RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 RALBP11234 206 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 ARSAP15289 507 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CKMT2P17540 419 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 NR1D1P20393 614 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CTNNA2P26232 953 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 HOXA7P31268 230 aaPredicted RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 SERPINB6P35237 376 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 SLC16A2P36021 539 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CAPGP40121 348 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 AVPR1BP47901 424 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 PLTPP55058 493 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 SLC8A3P57103 927 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 GUCY1B3Q02153 619 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 ITIH3Q06033 890 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CUL1Q13616 776 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 BYSLQ13895 437 aaKnown RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 SLC39A14Q15043 492 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 IQCB1Q15051 598 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 RBBP5Q15291 538 aaKnown RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 SMTNL2Q2TAL5 461 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 PCGF3Q3KNV8 242 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CERKLQ49MI3 558 aaPredicted RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 SLC9C1Q4G0N8 1177 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TMEM196Q5HYL7 178 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 GCNT6Q5T4J0 391 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 PRAMEF8Q5VWM4 474 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 C1QL3Q5VWW1 255 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 KRT39Q6A163 491 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3GQ6DHY5 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 SULT1C3Q6IMI6 304 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3CQ6IPX1 549 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 NAPEPLDQ6IQ20 393 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 MACC1Q6ZN28 852 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 PRSS42Q7Z5A4 293 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 ADAMTSL2Q86TH1 951 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 SIAH3Q8IW03 269 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 SLC15A3Q8IY34 581 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D3Q8IZP1 549 aaPredicted RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 LEMD2Q8NC56 503 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TRIM58Q8NG06 486 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 NCOA7Q8NI08 942 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 TBC1D15Q8TC07 691 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 RAET1EQ8TD07 263 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 SLC26A7Q8TE54 656 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 KAT2BQ92831 832 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 LENG9Q96B70 501 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 DTD2Q96FN9 168 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 MSANTD3Q96H12 275 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 ZNF333Q96JL9 665 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 ART5Q96L15 291 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 CDRT15Q96T59 188 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 PNKPQ96T60 521 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 MYOCQ99972 504 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 JPH2Q9BR39 696 aaPredicted RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 C1QTNF1Q9BXJ1 281 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 IFIH1Q9BYX4 1025 aaKnown RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 MRPL37Q9BZE1 423 aaKnown RBP4.48□□□□□ -1.69
CD44-202ENST00000278385 TRPV6Q9H1D0 765 aa4.48□□□□□ -1.69
CD44-202ENST00000278385 MMP27Q9H306 513 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms