RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PPP2R2BQ00005 443 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 CYP4F3Q08477 520 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 TWF1Q12792 350 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 IL18R1Q13478 541 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 SELPLGQ14242 412 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 C16orf72Q14CZ0 275 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 PLA2G4EQ3MJ16 856 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 DCBLD1Q8N8Z6 715 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ZNF555Q8NEP9 628 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 TBC1D15Q8TC07 691 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ING5Q8WYH8 240 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 DCUN1D5Q9BTE7 237 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 DPY30Q9C005 99 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 CLMPQ9H6B4 373 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 LATS2Q9NRM7 1088 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 TRPM5Q9NZQ8 1165 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 OPTCQ9UBM4 332 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ADGRE2Q9UHX3 823 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 C3orf18Q9UK00 162 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ANGPTL3Q9Y5C1 460 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 PCDHB9Q9Y5E1 797 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 INSL5Q9Y5Q6 135 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ZDBF2Q9HCK1 2354 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 IQCF5A8MTL0 148 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 K7EPI3 171 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 TAPBPO15533 448 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 PGLSO95336 258 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 PGRP06401 933 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ITGALP20701 1170 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 EEF1B2P24534 225 aaKnown RBP12.61□□□□□ -0.39
C9orf3-201ENST00000277198 DGKQP52824 942 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 PTPN5P54829 565 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 TMED1Q13445 227 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 GPR33Q49SQ1 333 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 RUNDC3AQ59EK9 446 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 ZC3H12BQ5HYM0 836 aaKnown RBP12.61□□□□□ -0.39
C9orf3-201ENST00000277198 MACC1Q6ZN28 852 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 TMEM26Q6ZUK4 368 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 SERPINA9Q86WD7 417 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 HS6ST3Q8IZP7 471 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 SMYD1Q8NB12 490 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 USP7Q93009 1102 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 TBC1D20Q96BZ9 403 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 TCEAL4Q96EI5 215 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 SMIM14Q96QK8 99 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 THUMPD3Q9BV44 507 aaKnown RBP12.61□□□□□ -0.39
C9orf3-201ENST00000277198 PIF1Q9H611 641 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 FAM118AQ9NWS6 357 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 DPP7Q9UHL4 492 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 GREB1Q4ZG55 1949 aa12.61□□□□□ -0.39
C9orf3-201ENST00000277198 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 A0A1W2PPW3 197 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 FAM220BPB1ANY3 271 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 DFNA5O60443 496 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 RSL1D1O76021 490 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 PRAMEF1O95521 474 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 CST1P01037 141 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 MT-ND1P03886 318 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 HNRNPA1P09651 372 aaKnown RBP eCLIP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 CBSLP0DN79 551 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 CBSP35520 551 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 CCR2P41597 374 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 HSPA7P48741 367 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 SGSHP51688 502 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 RHOAP61586 193 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 RPL38P63173 70 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ZXDAP98168 799 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 NFATC3Q12968 1075 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 NFATC2Q13469 925 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 NEDD8Q15843 81 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 TTLL9Q3SXZ7 439 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 FGD3Q5JSP0 725 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 GPRC6AQ5T6X5 926 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ITIH5Q86UX2 942 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 TCEAL8Q8IYN2 117 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 CBARPQ8N350 705 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 OR5K1Q8NHB7 308 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 PIH1D2Q8WWB5 315 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 FIG4Q92562 907 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ACDQ96AP0 544 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 RHBDF1Q96CC6 855 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 EID2BQ96D98 161 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 SLC47A1Q96FL8 570 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 MYO19Q96H55 970 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 FAM210AQ96ND0 272 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 RPP25Q9BUL9 199 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 KLF16Q9BXK1 252 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 TOR3AQ9H497 397 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 SOX17Q9H6I2 414 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 ACTR8Q9H981 624 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 LRTM1Q9HBL6 345 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 DCAF13Q9NV06 445 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 AFF4Q9UHB7 1163 aaKnown RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 PSME2Q9UL46 239 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 HEMK1Q9Y5R4 338 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-201ENST00000277198 V9GYQ6 96 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 TRBV5-3A0A0A0MS03 114 aa12.6□□□□□ -0.39
C9orf3-201ENST00000277198 EIF3FO00303 357 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms