RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 TRPV4Q9HBA0 871 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 GDAP2Q9NXN4 497 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 POMPQ9Y244 141 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 KCNIP3Q9Y2W7 256 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 TESMINQ9Y4I5 508 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 NOL4O94818 638 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 MMP3P08254 477 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 CORO1AP31146 461 aaKnown RBP7.83□□□□□ -1.16
LIMD1-201ENST00000273317 SLC1A2P43004 574 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 CLCN4P51793 760 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 NRG1Q02297 640 aaPredicted RBP7.83□□□□□ -1.16
LIMD1-201ENST00000273317 GXYLT1Q4G148 440 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 CAND1Q86VP6 1230 aaKnown RBP7.83□□□□□ -1.16
LIMD1-201ENST00000273317 LCN9Q8WX39 176 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 SGCDQ92629 289 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 OSTF1Q92882 214 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 TMEM209Q96SK2 561 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 EPYCQ99645 322 aa7.83□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3DA0A087WVF3 549 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3IA0A087WXS9 549 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3EA0A087X179 549 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3KA0A087X1G2 549 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3FA6NER0 549 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3LB9A6J9 549 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 UGT2B4P06133 528 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3HP0C7X1 549 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CCKBRP32239 447 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 GRK5P34947 590 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SCNN1AP37088 669 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 MAP3K8P41279 467 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CRY2Q49AN0 593 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3GQ6DHY5 549 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3CQ6IPX1 549 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TBC1D3Q8IZP1 549 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 C10orf82Q8WW14 230 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 USP29Q9HBJ7 922 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 P2RX2Q9UBL9 471 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TLR4O00206 839 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 KLF11O14901 512 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 OR3A3P47888 321 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 OR3A2P47893 321 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SMSP52788 366 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 GNA12Q03113 381 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CHIT1Q13231 466 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF782Q6ZMW2 699 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TOMM5Q8N4H5 51 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 HDDC3Q8N4P3 179 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ABCG8Q9H221 673 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 MRM3Q9HC36 420 aaKnown RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 OXSMQ9NWU1 459 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 LYARQ9NX58 379 aaKnown RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 EIF2B4Q9UI10 523 aaKnown RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 M0R036 132 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 DCLK1O15075 740 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 VIPP01282 170 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 FUT4P22083 530 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 FMO3P31513 532 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 C4orf46Q504U0 113 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CYP2U1Q7Z449 544 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 NUDT13Q86X67 352 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 RGMAQ96B86 450 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 EXOC2Q96KP1 924 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CAPN14A8MX76 684 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 hCG_2039718K7EN88 272 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 TARDBPQ13148 414 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 DUSP28Q4G0W2 176 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ARSHQ5FYA8 562 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 UBAP2Q5T6F2 1119 aaKnown RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 DGLUCYQ7Z3D6 616 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 PM20D2Q8IYS1 436 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 DQX1Q8TE96 717 aaKnown RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 PCDHB18PQ96TA0 734 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 HNRNPABQ99729 332 aaKnown RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 FEM1AQ9BSK4 669 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 EBPLQ9BY08 206 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 FAM83DQ9H4H8 585 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SLC19A2O60779 497 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CD36P16671 472 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 NPR2P20594 1047 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 NCBP2P52298 156 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 S100A12P80511 92 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SP140Q13342 867 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 RALGPS1Q5JS13 557 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 PAOXQ6QHF9 649 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 FEM1CQ96JP0 617 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 SLC30A2Q9BRI3 323 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 NDC1Q9BTX1 674 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 NUP188Q5SRE5 1749 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 RIMBP3CA6NJZ7 1639 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 RIMBP3BA6NNM3 1639 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 RIMBP3Q9UFD9 1639 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ELOA3DA6NLF2 546 aaPredicted RBP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 OR1F1O43749 312 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 KDM4BO94953 1096 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 NT5EP21589 574 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 CSTF2P33240 577 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIMD1-201ENST00000273317 HSPB3Q12988 150 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 UGCGQ16739 394 aa7.82□□□□□ -1.16
LIMD1-201ENST00000273317 ELOA3BQ3SY89 546 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms