RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TBC1D3HP0C7X1 549 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 NEK2P51955 445 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 PCDH1Q08174 1060 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 ATP6AP1LQ52LC2 224 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 PDCD4Q53EL6 469 aaKnown RBP11.77□□□□□ -0.53
SDE2-201ENST00000272091 SGO1Q5FBB7 561 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TPRG1LQ5T0D9 272 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 METRNLQ641Q3 311 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TBC1D3GQ6DHY5 549 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TBC1D3CQ6IPX1 549 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 BLOC1S3Q6QNY0 202 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TBC1D3Q8IZP1 549 aaPredicted RBP11.77□□□□□ -0.53
SDE2-201ENST00000272091 PGAM4Q8N0Y7 254 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 FNDC5Q8NAU1 212 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 OR5AR1Q8NGP9 310 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 WDR41Q9HAD4 459 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 EFCAB1Q9HAE3 211 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 MRGBPQ9NV56 204 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 SLC17A4Q9Y2C5 497 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 CA5BQ9Y2D0 317 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 NR5A2O00482 541 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 SRFP11831 508 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 MAPK9P45984 424 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 TPMTP51580 245 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 STX1BP61266 288 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 EMX2Q04743 252 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 SGCGQ13326 291 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 NR6A1Q15406 480 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 AP5B1Q2VPB7 878 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 PIGGQ5H8A4 983 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 ARHGAP24Q8N264 748 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 FBXW8Q8N3Y1 598 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 PHC3Q8NDX5 983 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 PROKR1Q8TCW9 393 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 MED8Q96G25 268 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 PSMD13Q9UNM6 376 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 WDR37Q9Y2I8 494 aa11.77□□□□□ -0.53
SDE2-201ENST00000272091 LATO43561 262 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 CHIT1Q13231 466 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 E2F2Q14209 437 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 KIAA0040Q15053 153 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 ZRSR2Q15696 482 aaKnown RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 KIAA1324Q6UXG2 1013 aaKnown RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 MYLK4Q86YV6 388 aaPredicted RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 FOPNLQ96NB1 174 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 MENTQ9BUN1 341 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 SLC25A23Q9BV35 468 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 EBF2Q9HAK2 575 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 NDRG2Q9UN36 371 aaKnown RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 L3MBTL1Q9Y468 752 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 POLR3HQ9Y535 204 aaPredicted RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 POM121BA6NF01 834 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 NRP2O60462 931 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 ULK1O75385 1050 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 G6PDP11413 515 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 RPA4Q13156 261 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 MAPRE2Q15555 327 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 ZNF423Q2M1K9 1284 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 VPS26BQ4G0F5 336 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 EOGTQ5NDL2 527 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 ADNP2Q6IQ32 1131 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 C16orf89Q6UX73 402 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 CDX2Q99626 313 aaPredicted RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 PLAGL1Q9UM63 463 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 DNMT3AQ9Y6K1 912 aaPredicted RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 SLC31A1O15431 190 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 KRT36O76013 467 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 JUPP14923 745 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 THOP1P52888 689 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 CLDN2P57739 230 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 ACTR3P61158 418 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 TBPL1P62380 186 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 CCNIQ14094 377 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 RCAN2Q14206 197 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 FBXO43Q4G163 708 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 UNC5DQ6UXZ4 953 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 ENDOVQ8N8Q3 282 aaKnown RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 OR9A1PQ8NGU1 263 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 WDR20Q8TBZ3 569 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 ATL1Q8WXF7 558 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 SCARF2Q96GP6 870 aaPredicted RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 UHRF1Q96T88 793 aaPredicted RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 SGPP1Q9BX95 441 aa11.76□□□□□ -0.53
SDE2-201ENST00000272091 PHPT1Q9NRX4 125 aaPredicted RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 PNMA8BQ9ULN7 279 aaPredicted RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 CFAP20Q9Y6A4 193 aaKnown RBP11.76□□□□□ -0.53
SDE2-201ENST00000272091 PABPN1LA6NDY0 278 aaKnown RBP11.75□□□□□ -0.53
SDE2-201ENST00000272091 H0Y8X5 98 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 SLC28A1O00337 649 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 MRASO14807 208 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 KMOO15229 486 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 ERFP50548 548 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 DMPKQ09013 629 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 DOC2AQ14183 400 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 IL23RQ5VWK5 629 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 KBTBD6Q86V97 674 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 ASB12Q8WXK4 309 aa11.75□□□□□ -0.53
SDE2-201ENST00000272091 IL17FQ96PD4 163 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms