RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 DNAJC22Q8N4W6 341 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 ZBTB2Q8N680 514 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 LKAAEAR1Q8TD35 194 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 MENTQ9BUN1 341 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 SLC7A5P2Q9GIP4 190 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 SPRTNQ9H040 489 aaPredicted RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 LZTFL1Q9NQ48 299 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 ACSS2Q9NR19 701 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 EIF2B3Q9NR50 452 aaKnown RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 TREX1Q9NSU2 369 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 MARCH4Q9P2E8 410 aaPredicted RBP9.38□□□□□ -0.91
VPS41-201ENST00000265745 PLAGL1Q9UM63 463 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 PLAAQ9Y263 795 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 ZKSCAN5Q9Y2L8 839 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 AP1M2Q9Y6Q5 423 aa9.38□□□□□ -0.91
VPS41-201ENST00000265745 UBR5O95071 2799 aaPredicted RBP9.37□□□□□ -0.91
VPS41-201ENST00000265745 ISM1B1AKI9 464 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CD3EAPO15446 510 aaKnown RBP9.37□□□□□ -0.91
VPS41-201ENST00000265745 ZSCAN9O15535 394 aaPredicted RBP9.37□□□□□ -0.91
VPS41-201ENST00000265745 KDM1AO60341 852 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CEACAM4O75871 244 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 TMEM63AO94886 807 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 FGGP02679 453 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 APOA4P06727 396 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CTSBP07858 339 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CBSLP0DN79 551 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 AGXTP21549 392 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CD9P21926 228 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 PEBP1P30086 187 aaKnown RBP9.37□□□□□ -0.91
VPS41-201ENST00000265745 PKLRP30613 574 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CBSP35520 551 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 KCNJ1P48048 391 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CD97P48960 835 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 NPY2RP49146 381 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 TTPAP49638 278 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 RAB28P51157 221 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 PGDP52209 483 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 MLLT10P55197 1068 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CRADDP78560 199 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 GRB7Q14451 532 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 SLC5A12Q1EHB4 618 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 DEFB110Q30KQ9 67 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 RHBDD2Q6NTF9 364 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 TLDC1Q6P9B6 456 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 UNC5DQ6UXZ4 953 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 FAM20CQ8IXL6 584 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 LINC01555Q8NAE3 123 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 PPHLN1Q8NEY8 458 aaKnown RBP9.37□□□□□ -0.91
VPS41-201ENST00000265745 N4BP2L2Q92802 583 aaPredicted RBP9.37□□□□□ -0.91
VPS41-201ENST00000265745 COL26A1Q96A83 441 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 MIB2Q96AX9 1013 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 GBP5Q96PP8 586 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 DHRS4Q9BTZ2 278 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 SLC25A23Q9BV35 468 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 TSSK1BQ9BXA7 367 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 IL22Q9GZX6 179 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 P2RY12Q9H244 342 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CATSPERZQ9NTU4 200 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 BFARQ9NZS9 450 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 DCTN4Q9UJW0 460 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 ANAPC5Q9UJX4 755 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 PLCL2Q9UPR0 1127 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 RELNP78509 3460 aa9.37□□□□□ -0.91
VPS41-201ENST00000265745 CLEC18AA5D8T8 446 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 CYSRT1A8MQ03 144 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 C9J4A7 227 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 AP3B1O00203 1094 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 RPN2P04844 631 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 CCDC175P0C221 793 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 RPS3P23396 243 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS41-201ENST00000265745 ARNTP27540 789 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 NMBRP28336 390 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 BASP1P80723 227 aaKnown RBP9.36□□□□□ -0.91
VPS41-201ENST00000265745 DCDP81605 110 aaKnown RBP9.36□□□□□ -0.91
VPS41-201ENST00000265745 CDK16Q00536 496 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 UBAP2LQ14157 1087 aaKnown RBP9.36□□□□□ -0.91
VPS41-201ENST00000265745 SSPNQ14714 243 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 PTRHD1Q6GMV3 140 aaKnown RBP9.36□□□□□ -0.91
VPS41-201ENST00000265745 LRRC8BQ6P9F7 803 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 CLEC18BQ6UXF7 455 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 MED25Q71SY5 747 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 GSTA5Q7RTV2 222 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 DCUN1D3Q8IWE4 304 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 LRRC8AQ8IWT6 810 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 KRT222Q8N1A0 295 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 MPP5Q8N3R9 675 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 ZNF655Q8N720 491 aaPredicted RBP9.36□□□□□ -0.91
VPS41-201ENST00000265745 PRELID2Q8N945 189 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 TMEM102Q8N9M5 508 aaPredicted RBP9.36□□□□□ -0.91
VPS41-201ENST00000265745 LMNTD1Q8N9Z9 388 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 CLEC18CQ8NCF0 446 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 FDCSPQ8NFU4 85 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 TRIM58Q8NG06 486 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 CFAP61Q8NHU2 1237 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 PROKR1Q8TCW9 393 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 MAIP1Q8WWC4 291 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 MFSD3Q96ES6 412 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 C17orf62Q9BQA9 187 aa9.36□□□□□ -0.91
VPS41-201ENST00000265745 KIFC1Q9BW19 673 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms