RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 BARD1Q99728 777 aaKnown RBP17.64■□□□□ 0.41
COL5A3-201ENST00000264828 APOBEC3GQ9HC16 384 aaKnown RBP17.64■□□□□ 0.41
COL5A3-201ENST00000264828 C2CD4BA6NLJ0 364 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 ACOX3O15254 700 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 LYPLA2O95372 231 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 BTN3A2P78410 334 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 ALG1LQ6GMV1 187 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 KLK6Q92876 244 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 RIPK3Q9Y572 518 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 NEMP2A6NFY4 417 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 H3BSH0 61 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 CPN2P22792 545 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 UPF1Q92900 1129 aaKnown RBP eCLIP17.64■□□□□ 0.41
COL5A3-201ENST00000264828 TMED9Q9BVK6 235 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 TRMT61BQ9BVS5 477 aaKnown RBP17.64■□□□□ 0.41
COL5A3-201ENST00000264828 CKMT2P17540 419 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 UGT1A6P19224 532 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 UGT1A1P22309 533 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 UGT1A4P22310 534 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 CSTF2P33240 577 aaKnown RBP eCLIP17.64■□□□□ 0.41
COL5A3-201ENST00000264828 UGT1A3P35503 534 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 MAGEA12P43365 314 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 DGKEP52429 567 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 DNASE1L3Q13609 305 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 NADK2Q4G0N4 442 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 PCDH19Q8TAB3 1148 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 SCGB1D2O95969 90 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 NDST2P52849 883 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 BNIP3Q12983 259 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 KLHL36Q8N4N3 616 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 SLC39A3Q9BRY0 314 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 TAS2R1Q9NYW7 299 aa17.64■□□□□ 0.41
COL5A3-201ENST00000264828 TCRBV7S3A2A0A539 114 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 CPNE3O75131 537 aaKnown RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 PRAMEF12O95522 483 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 PRLP01236 227 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 OPN1SWP03999 348 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 CYP11A1P05108 521 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 CDH1P12830 882 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 FSHRP23945 695 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 L1CAMP32004 1257 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 ABCA11PQ4W5N1 156 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 POLR2J3Q9H1A7 115 aaKnown RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 FARSBQ9NSD9 589 aaKnown RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 FBXW11Q9UKB1 542 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 OAZ3Q9UMX2 235 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 PRNPP04156 253 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 ARL14EPQ8N8R7 260 aaPredicted RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 FCGR1BQ92637 280 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 IL4I1Q96RQ9 567 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 NUSAP1Q9BXS6 441 aaKnown RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 DPEP2Q9H4A9 486 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 STXBP5LQ9Y2K9 1186 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 B3GALT2O43825 422 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 PCDH7O60245 1069 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 CHAF1BQ13112 559 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 TOR1AIP1Q5JTV8 583 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 BRD7Q9NPI1 651 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 NOCTQ9UK39 431 aaKnown RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 PADI3Q9ULW8 664 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 RPL36Q9Y3U8 105 aaKnown RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 ARL5CA6NH57 179 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 PTX3P26022 381 aaPredicted RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 ACSL1P33121 698 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 PBX3P40426 434 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 CLCN7P51798 805 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 DUSP28Q4G0W2 176 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 BRSK1Q8TDC3 778 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 SLC25A36Q96CQ1 311 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 CCDC120Q96HB5 630 aa17.63■□□□□ 0.41
COL5A3-201ENST00000264828 DUS2Q9NX74 493 aaKnown RBP17.63■□□□□ 0.41
COL5A3-201ENST00000264828 KANTRA0A1W2PQU2 76 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 YBEYP58557 167 aaPredicted RBP17.62■□□□□ 0.41
COL5A3-201ENST00000264828 RPL6Q02878 288 aaKnown RBP17.62■□□□□ 0.41
COL5A3-201ENST00000264828 KLHL26Q53HC5 615 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 OR13C4Q8NGS5 318 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 CEP76Q8TAP6 659 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 RUVBL1Q9Y265 456 aaKnown RBP17.62■□□□□ 0.41
COL5A3-201ENST00000264828 ATP6V1G1O75348 118 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 PRKD3O94806 890 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 FGF19O95750 216 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 FCER2P06734 321 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 ARL2P36404 184 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 PTGER3P43115 390 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 IST1P53990 364 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 FUT2Q10981 343 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 SCGB2B2Q4G0G5 96 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 C1orf189Q5VU69 101 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 SYCE2Q6PIF2 218 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 FOXRED2Q8IWF2 684 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 HIPK3Q9H422 1215 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 A0A1B0GVM2 712 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 ARPC2O15144 300 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 C1QTNF8P60827 252 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 SLC10A7Q0GE19 358 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 DAG1Q14118 895 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 DTLQ9NZJ0 730 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 SLC7A1P30825 629 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 RBM48Q5RL73 367 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms