RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 NANOGQ9H9S0 305 aa15.93■□□□□ 0.14
CTCF-201ENST00000264010 TCRBV3S1A0A5B6 114 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 RECQL5O94762 991 aaPredicted RBP15.92■□□□□ 0.14
CTCF-201ENST00000264010 PRPS2P11908 318 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 CSF2RAP15509 400 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 PLCL1Q15111 1095 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 POM121L1PQ3SYA9 428 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 GPR180Q86V85 440 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 CMTM6Q9NX76 183 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 B4GALT6Q9UBX8 382 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 DYRK1BQ9Y463 629 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 MANBAO00462 879 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 TULP3O75386 442 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 MT-ND1P03886 318 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 PCNAP12004 261 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 MYCLP1P12525 358 aaPredicted RBP15.92■□□□□ 0.14
CTCF-201ENST00000264010 PCSK2P16519 638 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 HTR6P50406 440 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 NEK5Q6P3R8 708 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 ABRAXAS1Q6UWZ7 409 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 SLC45A3Q96JT2 553 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 NSMCE3Q96MG7 304 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 RUBCNLQ9H714 662 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 TMEM45AQ9NWC5 275 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 ADGRE2Q9UHX3 823 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 MRPS23Q9Y3D9 190 aaKnown RBP15.92■□□□□ 0.14
CTCF-201ENST00000264010 MGAT4DA6NG13 374 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 CCNKO75909 580 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 CD1EP15812 388 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 ALDH4A1P30038 563 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 DEFB103AP81534 67 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 C18orf21Q32NC0 220 aaPredicted RBP15.92■□□□□ 0.14
CTCF-201ENST00000264010 XKR6Q5GH73 641 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 LCN8Q6JVE9 175 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 BRAT1Q6PJG6 821 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 MACC1Q6ZN28 852 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 NECAB2Q7Z6G3 386 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 TSPAN33Q86UF1 283 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 ZFAND4Q86XD8 727 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 CLP1Q92989 425 aaKnown RBP15.92■□□□□ 0.14
CTCF-201ENST00000264010 TUBB1Q9H4B7 451 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 SARDHQ9UL12 918 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 RNF11Q9Y3C5 154 aa15.92■□□□□ 0.14
CTCF-201ENST00000264010 MYO1GB0I1T2 1018 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ZNF682O95780 498 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 DDX6P26196 483 aaKnown RBP eCLIP15.91■□□□□ 0.14
CTCF-201ENST00000264010 CCT8P50990 548 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 CLCN7P51798 805 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 SLC7A9P82251 487 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 CREB5Q02930 508 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 MRPL28Q13084 256 aaKnown RBP15.91■□□□□ 0.14
CTCF-201ENST00000264010 RCAN2Q14206 197 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 EID3Q8N140 333 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 LILRA2Q8N149 483 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 POP5Q969H6 163 aaKnown RBP15.91■□□□□ 0.14
CTCF-201ENST00000264010 SCRN2Q96FV2 425 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ADI1Q9BV57 179 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ATG10Q9H0Y0 220 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 SACM1LQ9NTJ5 587 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 KIF17Q9P2E2 1029 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 PDLIM1O00151 329 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 E2F3O00716 465 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 H6PDO95479 791 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ELFN1P0C7U0 828 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 CTSAP10619 480 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 SRCP12931 536 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 CDH2P19022 906 aaPredicted RBP15.91■□□□□ 0.14
CTCF-201ENST00000264010 RPS14P62263 151 aaKnown RBP15.91■□□□□ 0.14
CTCF-201ENST00000264010 DNASE1L3Q13609 305 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 DMC1Q14565 340 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 CRTC1Q6UUV9 634 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 DPY19L3Q6ZPD9 716 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 LRRC70Q7Z2Q7 622 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ADHFE1Q8IWW8 467 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 SFRP1Q8N474 314 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 STARD8Q92502 1023 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 APOLD1Q96LR9 279 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 TRIM8Q9BZR9 551 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 SMPD3Q9NY59 655 aaPredicted RBP15.91■□□□□ 0.14
CTCF-201ENST00000264010 TRPS1Q9UHF7 1281 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ST14Q9Y5Y6 855 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 DNAH12Q6ZR08 3092 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ELOVL7A1L3X0 281 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 RPS9P46781 194 aaKnown RBP15.91■□□□□ 0.14
CTCF-201ENST00000264010 GSSP48637 474 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ABRAXAS2Q15018 415 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ANKRD33Q7Z3H0 272 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 AKAP14Q86UN6 197 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 HORMAD1Q86X24 394 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ANKFN1Q8N957 763 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 LEMD2Q8NC56 503 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 TDP1Q9NUW8 608 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 ARMC1Q9NVT9 282 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 OAZ3Q9UMX2 235 aa15.91■□□□□ 0.14
CTCF-201ENST00000264010 GNG14A0A1W2PPG7 69 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 CENPXA8MT69 81 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 FGBP02675 491 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 GSNP06396 782 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 COX7A2P14406 83 aa15.9■□□□□ 0.14
CTCF-201ENST00000264010 TCEA1P23193 301 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms