RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 SERTAD3Q9UJW9 196 aa17.79■□□□□ 0.44
COPE-201ENST00000262812 MED16Q9Y2X0 877 aa17.79■□□□□ 0.44
COPE-201ENST00000262812 MRPS18BQ9Y676 258 aaKnown RBP17.79■□□□□ 0.44
COPE-201ENST00000262812 PTPRQQ9UMZ3 2332 aa17.79■□□□□ 0.44
COPE-201ENST00000262812 AHCTF1Q8WYP5 2266 aa17.79■□□□□ 0.44
COPE-201ENST00000262812 ERVH48-1M5A8F1 160 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 ATXN7O15265 892 aaPredicted RBP17.78■□□□□ 0.44
COPE-201ENST00000262812 TP73O15350 636 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 MATN4O95460 622 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 AHSGP02765 367 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 MT-ND3P03897 115 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 PRKAR1AP10644 381 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 TCN2P20062 427 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 F8A1P23610 371 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 GABRB3P28472 473 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 ATP5DP30049 168 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 CCNFP41002 786 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 COL9A2Q14055 689 aaPredicted RBP17.78■□□□□ 0.44
COPE-201ENST00000262812 SF1Q15637 639 aaKnown RBP17.78■□□□□ 0.44
COPE-201ENST00000262812 SLC5A12Q1EHB4 618 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 TRMT10BQ6PF06 316 aaKnown RBP17.78■□□□□ 0.44
COPE-201ENST00000262812 PCSK4Q6UW60 755 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 RAB42Q8N4Z0 105 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 FBXO36Q8NEA4 188 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 OR8K5Q8NH50 307 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 MAGEC3Q8TD91 643 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 SLC39A7Q92504 469 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 TTC9Q92623 222 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 KCNJ9Q92806 393 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 EXTL1Q92935 676 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 AARSD1Q9BTE6 412 aaKnown RBP17.78■□□□□ 0.44
COPE-201ENST00000262812 EFHD1Q9BUP0 239 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 DHRS7Q9Y394 339 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 MRFAP1Q9Y605 127 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 TEX264Q9Y6I9 313 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 FAM208BQ5VWN6 2430 aa17.78■□□□□ 0.44
COPE-201ENST00000262812 PIKFYVEQ9Y2I7 2098 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 ZNF891A8MT65 544 aaPredicted RBP17.77■□□□□ 0.44
COPE-201ENST00000262812 HCRTR1O43613 425 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 VPS26AO75436 327 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 PRB1P04280 392 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 CYP2A7P20853 494 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 MCM3P25205 808 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 CALCOCO2Q13137 446 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 FASTKD3Q14CZ7 662 aaKnown RBP17.77■□□□□ 0.44
COPE-201ENST00000262812 DEFB110Q30KQ9 67 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 TEDDM1Q5T9Z0 273 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 C16orf46Q6P387 395 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 CPNE9Q8IYJ1 553 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 SLC38A9Q8NBW4 561 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 BBOF1Q8ND07 529 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 DENND1AQ8TEH3 1009 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 CT55Q8WUE5 264 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 ZNF592Q92610 1267 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 SLC22A18Q96BI1 424 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 LRRC39Q96DD0 335 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 CLIP3Q96DZ5 547 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 SLC45A3Q96JT2 553 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 SLC7A5P2Q9GIP4 190 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 SPRTNQ9H040 489 aaPredicted RBP17.77■□□□□ 0.44
COPE-201ENST00000262812 SYTL2Q9HCH5 934 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 LHX9Q9NQ69 397 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 COMMD10Q9Y6G5 202 aa17.77■□□□□ 0.44
COPE-201ENST00000262812 ARHGEF33A8MVX0 844 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 CPNE3O75131 537 aaKnown RBP17.76■□□□□ 0.43
COPE-201ENST00000262812 URI1O94763 535 aaPredicted RBP17.76■□□□□ 0.43
COPE-201ENST00000262812 SYF2O95926 243 aaKnown RBP17.76■□□□□ 0.43
COPE-201ENST00000262812 CTSBP07858 339 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 MAGP20916 626 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 GRIA3P42263 894 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 ITGA1P56199 1179 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 LY6DQ14210 128 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 FASTKQ14296 549 aaKnown RBP17.76■□□□□ 0.43
COPE-201ENST00000262812 TBR1Q16650 682 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.76■□□□□ 0.43
COPE-201ENST00000262812 OR9A1PQ8NGU1 263 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 CD200R1Q8TD46 325 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 MR1Q95460 341 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 ARHGAP9Q9BRR9 750 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 RAB11FIP5Q9BXF6 653 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 TWSG1Q9GZX9 223 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 IRAK4Q9NWZ3 460 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 KLHL42Q9P2K6 505 aa17.76■□□□□ 0.43
COPE-201ENST00000262812 E7EQ34 232 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 NDC80O14777 642 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 PSIP1O75475 530 aaKnown RBP17.75■□□□□ 0.43
COPE-201ENST00000262812 CATP04040 527 aaKnown RBP17.75■□□□□ 0.43
COPE-201ENST00000262812 PSMB5P28074 263 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 CDKN2DP55273 166 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 TIAL1Q01085 375 aaKnown RBP eCLIP17.75■□□□□ 0.43
COPE-201ENST00000262812 GPS2Q13227 327 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 TSTA3Q13630 321 aaPredicted RBP17.75■□□□□ 0.43
COPE-201ENST00000262812 LINC00303Q3SY05 128 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 RBM20Q5T481 1227 aaKnown RBP17.75■□□□□ 0.43
COPE-201ENST00000262812 ATP1A1-AS1Q5TC04 95 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 STEAP4Q687X5 459 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 DUPD1Q68J44 220 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 CYHR1Q6ZMK1 362 aa17.75■□□□□ 0.43
COPE-201ENST00000262812 CAPN12Q6ZSI9 719 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms