RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 IL17FQ96PD4 163 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 TMEM237Q96Q45 408 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 EDEM2Q9BV94 578 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 ATG10Q9H0Y0 220 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 ACSS2Q9NR19 701 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 POT1Q9NUX5 634 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 SPATA7Q9P0W8 599 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 STOX2Q9P2F5 926 aaPredicted RBP15.15■□□□□ 0.02
GYPC-201ENST00000259254 CPNE7Q9UBL6 633 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 ANGPTL3Q9Y5C1 460 aa15.15■□□□□ 0.02
GYPC-201ENST00000259254 TNPO3Q9Y5L0 923 aaKnown RBP15.15■□□□□ 0.02
GYPC-201ENST00000259254 LNP1A1A4G5 178 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 LRRC14BA6NHZ5 514 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 ZNF839A8K0R7 811 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 CCNT2O60583 730 aaKnown RBP15.14■□□□□ 0.01
GYPC-201ENST00000259254 H2AFYO75367 372 aaKnown RBP15.14■□□□□ 0.01
GYPC-201ENST00000259254 SUPT7LO94864 414 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 SLC16A8O95907 504 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 SERPINE1P05121 402 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 FGF3P11487 239 aaPredicted RBP15.14■□□□□ 0.01
GYPC-201ENST00000259254 XRCC1P18887 633 aaPredicted RBP15.14■□□□□ 0.01
GYPC-201ENST00000259254 IMPDH1P20839 514 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 AGTR2P50052 363 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 DNAJB13P59910 316 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 HERVK_113P63132 956 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 STX3Q13277 289 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 GRB7Q14451 532 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 PDK4Q16654 411 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 ATG16L1Q676U5 607 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 ANKS6Q68DC2 871 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 MINDY1Q8N5J2 469 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 AVL9Q8NBF6 648 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 KYQ8NBH2 561 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 PPFIBP2Q8ND30 876 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 SAP25Q8TEE9 199 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 ZNF480Q8WV37 535 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 LCN9Q8WX39 176 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 TMEM79Q9BSE2 394 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 GATA5Q9BWX5 397 aaPredicted RBP15.14■□□□□ 0.01
GYPC-201ENST00000259254 ERVK-6Q9BXR3 956 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 XKR8Q9H6D3 395 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 KIR3DX1Q9H7L2 352 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 MANSC1Q9H8J5 431 aa15.14■□□□□ 0.01
GYPC-201ENST00000259254 PTBP2Q9UKA9 531 aaKnown RBP15.14■□□□□ 0.01
GYPC-201ENST00000259254 ADAMTS9Q9P2N4 1935 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 TM4SF5O14894 197 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 TAPBPO15533 448 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 STK16O75716 305 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 WDR47O94967 919 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 IMPA1P29218 277 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 HSD17B2P37059 387 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 GDF5P43026 501 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 PPM1FP49593 454 aaPredicted RBP15.13■□□□□ 0.01
GYPC-201ENST00000259254 PNLIPRP1P54315 467 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 UBE2IP63279 158 aaKnown RBP15.13■□□□□ 0.01
GYPC-201ENST00000259254 HHEXQ03014 270 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 NAE1Q13564 534 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 PTCHD3Q3KNS1 767 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 C14orf28Q4W4Y0 310 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 ZNF678Q5SXM1 525 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 C6orf132Q5T0Z8 1188 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 ARL14Q8N4G2 192 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 C2orf73Q8N5S3 287 aaPredicted RBP15.13■□□□□ 0.01
GYPC-201ENST00000259254 SNX31Q8N9S9 440 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 LMNTD1Q8N9Z9 388 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 RAB3IL1Q8TBN0 382 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 UBTD2Q8WUN7 234 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 ZNF75CPQ92670 426 aaPredicted RBP15.13■□□□□ 0.01
GYPC-201ENST00000259254 SH3KBP1Q96B97 665 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 PYCR2Q96C36 320 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 L3HYPDHQ96EM0 354 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 MAGEB18Q96M61 343 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 RAB11FIP5Q9BXF6 653 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 CAPS2Q9BXY5 557 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 CD244Q9BZW8 370 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 SLC40A1Q9NP59 571 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 NLGN3Q9NZ94 848 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 OPTCQ9UBM4 332 aa15.13■□□□□ 0.01
GYPC-201ENST00000259254 NOBOXO60393 691 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 HSPA4LO95757 839 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 GRK2P25098 689 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 PKLRP30613 574 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 SHMT2P34897 504 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 ARL1P40616 181 aaPredicted RBP15.12■□□□□ 0.01
GYPC-201ENST00000259254 RAB28P51157 221 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 GNGT1P63211 74 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 GPR18Q14330 331 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 PCBP2Q15366 365 aaKnown RBP eCLIP15.12■□□□□ 0.01
GYPC-201ENST00000259254 UNC50Q53HI1 259 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 THEMIS2Q5TEJ8 643 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 CAPN13Q6MZZ7 669 aaPredicted RBP15.12■□□□□ 0.01
GYPC-201ENST00000259254 OGFOD3Q6PK18 319 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 RBM12BQ8IXT5 1001 aaKnown RBP15.12■□□□□ 0.01
GYPC-201ENST00000259254 TEX9Q8N6V9 391 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 ARL10Q8N8L6 244 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 OR4E2Q8NGC2 313 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 MOCOSQ96EN8 888 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 DUSP23Q9BVJ7 150 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 SRMSQ9H3Y6 488 aa15.12■□□□□ 0.01
GYPC-201ENST00000259254 CCDC177Q9NQR7 707 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms