RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TTLL2Q9BWV7 592 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ADGRE3Q9BY15 652 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CRISPLD1Q9H336 500 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GPN2Q9H9Y4 310 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TBC1D13Q9NVG8 400 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 HCN2Q9UL51 889 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 MAGED2Q9UNF1 606 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 A0A0A6YYK5 440 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GTPBP1O00178 669 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 KIAA0391O15091 583 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CLDN3O15551 220 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ATG13O75143 517 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PPP3CBP16298 524 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 HOXA13P31271 388 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 HLCSP50747 726 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PM20D1Q6GTS8 502 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 KCNT2Q6UVM3 1135 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 RTL4Q6ZR62 310 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 OR6M1Q8NGM8 313 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SNIP1Q8TAD8 396 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 C22orf15Q8WYQ4 148 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 EXTL1Q92935 676 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ELP4Q96EB1 424 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 REEP2Q9BRK0 252 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TOLLIPQ9H0E2 274 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 MUC13Q9H3R2 512 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GJB4Q9NTQ9 266 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ADAMTS6Q9UKP5 1117 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SIGLEC6O43699 453 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SMPD2O60906 423 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CSF2P04141 144 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF37AP17032 561 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF8P17098 575 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC7A1P30825 629 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ITKQ08881 620 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 AGKQ53H12 422 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CYB5R2Q6BCY4 276 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF529Q6P280 563 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 NAA40Q86UY6 237 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 FJX1Q86VR8 437 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC26A11Q86WA9 606 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 MUL1Q969V5 352 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 AURKBQ96GD4 344 aaPredicted RBP6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PTDSS2Q9BVG9 487 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 DPAGT1Q9H3H5 408 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 UCK1Q9HA47 277 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 IGSF5Q9NSI5 407 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 NKIRAS2Q9NYR9 191 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 C5orf58C9J3I9 102 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC28A2O43868 658 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 UGT2B11O75310 529 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 RNF224P0DH78 156 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 NR2F2P24468 414 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 KIAA1024LP59773 190 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GHRHRQ02643 423 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 MBTD1Q05BQ5 628 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PMS2P3Q13401 168 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 GUK1Q16774 197 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 NDUFAF6Q330K2 333 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 C6orf132Q5T0Z8 1188 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC41A1Q8IVJ1 513 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 OR2T34Q8NGX1 318 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 OR2T3Q8NH03 318 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CEP76Q8TAP6 659 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 LPGAT1Q92604 370 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 LPAR1Q92633 364 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 CNTNAP3BQ96NU0 1288 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TSGA13Q96PP4 275 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SOHLH2Q9NX45 425 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SMPD4Q9NXE4 827 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 TMPRSS11EQ9UL52 423 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 SHOC2Q9UQ13 582 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PCDHGB6Q9Y5F9 930 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PCDHGA2Q9Y5H1 932 aa6.62□□□□□ -1.35
PDGFRA-201ENST00000257290 PPEF2O14830 753 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SYN3O14994 580 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 TLL1O43897 1013 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 CTDNEP1O95476 244 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 IFNGP01579 166 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RHOP08100 348 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 STSP08842 583 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF616Q08AN1 781 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 HIST2H2ACQ16777 129 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 KLHL22Q53GT1 634 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZBTB37Q5TC79 503 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 OLFML2AQ68BL7 652 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ELP2Q6IA86 826 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC36A4Q6YBV0 504 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PPIL6Q8IXY8 311 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 NLGN2Q8NFZ4 835 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ZFP90Q8TF47 636 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ADAM2Q99965 735 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 HTATIP2Q9BUP3 242 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 GSX2Q9BZM3 304 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RGCCQ9H4X1 137 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 PIF1Q9H611 641 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 ELP3Q9H9T3 547 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 TMEM260Q9NX78 707 aa6.61□□□□□ -1.35
PDGFRA-201ENST00000257290 RNF181Q9P0P0 153 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms