RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 TLR6Q9Y2C9 796 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 SNX5Q9Y5X3 404 aa20.11■□□□□ 0.81
SNX3-201ENST00000230085 NUP210Q8TEM1 1887 aaPredicted RBP20.1■□□□□ 0.81
SNX3-201ENST00000230085 BPTFQ12830 3046 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 A0A1B0GTL3 188 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 SUPT3HB4E1H0 165 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 C9JVG2 144 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 MSI1O43347 362 aaKnown RBP20.1■□□□□ 0.81
SNX3-201ENST00000230085 SCELO95171 688 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 RETP07949 1114 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 JUNDP17535 347 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 WEE1P30291 646 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 HPCAL1P37235 193 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 TMED10P49755 219 aaKnown RBP20.1■□□□□ 0.81
SNX3-201ENST00000230085 DSC2Q02487 901 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 CD47Q08722 323 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 SEMA3AQ14563 771 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 KIAA0040Q15053 153 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 OTUD3Q5T2D3 398 aaPredicted RBP20.1■□□□□ 0.81
SNX3-201ENST00000230085 C14orf80Q86SX3 495 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 LDB1Q86U70 411 aaPredicted RBP20.1■□□□□ 0.81
SNX3-201ENST00000230085 TMCO5AQ8N6Q1 288 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 OR2T11Q8NH01 316 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 ZNF583Q96ND8 569 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 NODALQ96S42 347 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 KXD1Q9BQD3 176 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 KLF16Q9BXK1 252 aaPredicted RBP20.1■□□□□ 0.81
SNX3-201ENST00000230085 PLA2G2FQ9BZM2 168 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 TRPV4Q9HBA0 871 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 SLAMF8Q9P0V8 285 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 DAPK2Q9UIK4 370 aa20.1■□□□□ 0.81
SNX3-201ENST00000230085 ZNF99A8MXY4 864 aaPredicted RBP20.09■□□□□ 0.81
SNX3-201ENST00000230085 SLC1A7O00341 560 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 SERPINB10P48595 397 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 GP2P55259 537 aaKnown RBP20.09■□□□□ 0.81
SNX3-201ENST00000230085 CDC20Q12834 499 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 GPRIN3Q6ZVF9 776 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 CARNMT1Q8N4J0 409 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 OR5K1Q8NHB7 308 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 DNAJB8Q8NHS0 232 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 ADAMTS19Q8TE59 1207 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 HMCESQ96FZ2 354 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 ZYG11BQ9C0D3 744 aa20.09■□□□□ 0.81
SNX3-201ENST00000230085 HELZP42694 1942 aaKnown RBP20.09■□□□□ 0.81
SNX3-201ENST00000230085 ANHXE9PGG2 379 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 LEFTY2O00292 366 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 NDUFS2O75306 463 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 GMNNO75496 209 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 HMBSP08397 361 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 HTR4Q13639 388 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 CTU2Q2VPK5 515 aaKnown RBP20.08■□□□□ 0.81
SNX3-201ENST00000230085 ATP6AP1LQ52LC2 224 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 PIK3R6Q5UE93 754 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 FAM219BQ5XKK7 198 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 Q6ZSR9 355 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 CELF5Q8N6W0 485 aaKnown RBP20.08■□□□□ 0.81
SNX3-201ENST00000230085 ZNF548Q8NEK5 533 aaPredicted RBP20.08■□□□□ 0.81
SNX3-201ENST00000230085 EXT2Q93063 718 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 WBP2Q969T9 261 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 REXO5Q96IC2 774 aaKnown RBP20.08■□□□□ 0.81
SNX3-201ENST00000230085 GABARAPL1Q9H0R8 117 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 ACTL8Q9H568 366 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 KCNK12Q9HB15 430 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 TMEM165Q9HC07 324 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 SEMA4BQ9NPR2 832 aaPredicted RBP20.08■□□□□ 0.81
SNX3-201ENST00000230085 NLE1Q9NVX2 485 aaPredicted RBP20.08■□□□□ 0.81
SNX3-201ENST00000230085 TRIOO75962 3097 aa20.08■□□□□ 0.81
SNX3-201ENST00000230085 SLC12A8A0AV02 714 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 OR51F1A6NGY5 319 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 HEPACAM2A8MVW5 462 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 SCAMP3O14828 347 aaKnown RBP20.08■□□□□ 0.8
SNX3-201ENST00000230085 ASGR2P07307 311 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 IRF1P10914 325 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 MSH3P20585 1137 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 RXRGP48443 463 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 MVKQ03426 396 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 EML3Q32P44 896 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 PARP15Q460N3 678 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 FUT11Q495W5 492 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 VITQ6UXI7 678 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 MTSS1LQ765P7 747 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 KDELC2Q7Z4H8 507 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 LGI2Q8N0V4 545 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 ATP6V0D2Q8N8Y2 350 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 YIPF6Q96EC8 236 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 SH3GL1Q99961 368 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 TRIM8Q9BZR9 551 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 ADNPQ9H2P0 1102 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 DUSP21Q9H596 190 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 ARMC7Q9H6L4 198 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 RMND5AQ9H871 391 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 ASIC5Q9NY37 505 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 COMMD10Q9Y6G5 202 aa20.08■□□□□ 0.8
SNX3-201ENST00000230085 E2F3O00716 465 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 SLC4A1P02730 911 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 PCSK2P16519 638 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 IL7RP16871 459 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 YBEYP58557 167 aaPredicted RBP20.07■□□□□ 0.8
SNX3-201ENST00000230085 KCNAB2Q13303 367 aa20.07■□□□□ 0.8
SNX3-201ENST00000230085 POLD3Q15054 466 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms