RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 IKZF5Q9H5V7 419 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 HPS4Q9NQG7 708 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CIDEBQ9UHD4 219 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 ZNHIT2Q9UHR6 403 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 LTBP2Q14767 1821 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 GFYI3L273 518 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CREG1O75629 220 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CPNE6O95741 557 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 C1SP09871 688 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 BMP1P13497 986 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 LHCGRP22888 699 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CTSOP43234 321 aaPredicted RBP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 ABHD18Q0P651 414 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 GRSF1Q12849 480 aaKnown RBP eCLIP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 PON2Q15165 354 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 KCTD8Q6ZWB6 473 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 HS6ST3Q8IZP7 471 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 ZNF557Q8N988 423 aaPredicted RBP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 TTC16Q8NEE8 873 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 ZNF555Q8NEP9 628 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 OR5K1Q8NHB7 308 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 C12orf43Q96C57 262 aaKnown RBP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 MUS81Q96NY9 551 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 BRD9Q9H8M2 597 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 POLR1BQ9H9Y6 1135 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 CARS2Q9HA77 564 aaKnown RBP21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 DNAJC11Q9NVH1 559 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 PCDHB14Q9Y5E9 798 aa21.43■■□□□ 1.02
SMARCD2-201ENST00000225742 PRMT3O60678 531 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 AP2A2O94973 939 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 ATP1B2P14415 290 aaPredicted RBP21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 HOXB9P17482 250 aaPredicted RBP21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 STK19P49842 368 aaPredicted RBP21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 PMS2P3Q13401 168 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 KCNC3Q14003 757 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 PLA2G4EQ3MJ16 856 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 LRRC23Q53EV4 343 aaPredicted RBP21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 C8orf59Q8N0T1 100 aaPredicted RBP21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 ELMOD1Q8N336 334 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 ZCCHC7Q8N3Z6 543 aaKnown RBP21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 MCOLN3Q8TDD5 553 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 HDAC2Q92769 488 aaKnown RBP21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 REXO5Q96IC2 774 aaKnown RBP21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 HHIPQ96QV1 700 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 ING2Q9H160 280 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 SERHLQ9NQF3 203 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 RAD18Q9NS91 495 aa21.42■■□□□ 1.02
SMARCD2-201ENST00000225742 CFAP99D6REC4 459 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 GNGT2O14610 69 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 UGDHO60701 494 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 PCNAP12004 261 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 ZNF30P17039 623 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 ATN1P54259 1190 aaPredicted RBP21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TLE2Q04725 743 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TOP3AQ13472 1001 aaPredicted RBP21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TUBA3CQ13748 450 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 RAB39AQ14964 217 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 PLCL1Q15111 1095 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 DPY19L1Q2PZI1 675 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 BROXQ5VW32 411 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 CROCCP3Q8IVE0 287 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 EID3Q8N140 333 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 CSGALNACT1Q8TDX6 532 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 FCRL1Q96LA6 429 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 DEFB118Q96PH6 123 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 SOX17Q9H6I2 414 aaPredicted RBP21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 DLGAP4Q9Y2H0 992 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TRIM64BA6NI03 449 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 WASH3PC4AMC7 463 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 AREL1O15033 823 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 PER2O15055 1255 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TGM5O43548 720 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 PRKD3O94806 890 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 CYP2A6P11509 494 aaPredicted RBP21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TCF3P15923 654 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TRPC1P48995 793 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 PHC1P78364 1004 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 PPP2R2BQ00005 443 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 ABRQ12979 859 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 DMC1Q14565 340 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 NKG7Q16617 165 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 RFX4Q33E94 735 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 ZIK1Q3SY52 487 aaPredicted RBP21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 GCNT7Q6ZNI0 430 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 RASGRP3Q8IV61 690 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 CMTM8Q8IZV2 173 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 FAM86B1Q8N7N1 296 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 LZICQ8WZA0 190 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TBC1D20Q96BZ9 403 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 MTFMTQ96DP5 389 aaKnown RBP21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 TOR3AQ9H497 397 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 ZDHHC6Q9H6R6 413 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 FAM118AQ9NWS6 357 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 B4GALT6Q9UBX8 382 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 EBF1Q9UH73 591 aa21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 HELZP42694 1942 aaKnown RBP21.41■■□□□ 1.02
SMARCD2-201ENST00000225742 HLA-FP30511 346 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 DCDC1P59894 354 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 GABARAPL2P60520 117 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 HSPA14Q0VDF9 509 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms