RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 RABL3Q5HYI8 236 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 SEMA3CQ99985 751 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 B3GNT4Q9C0J1 378 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 RPF2Q9H7B2 306 aaKnown RBP13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 MED31Q9Y3C7 131 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 EIF1AYO14602 144 aaKnown RBP13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 RASAL1O95294 804 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 RAB3BP20337 219 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 MC4RP32245 332 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 ICAM3P32942 547 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 EIF1AXP47813 144 aaKnown RBP13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 CLCN3P51790 818 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 HERVK_113P63132 956 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 TEX44Q53QW1 395 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 PNCKQ6P2M8 343 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 FAM46DQ8NEK8 389 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 KCNN1Q92952 543 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 SLC7A6OSQ96CW6 309 aaPredicted RBP13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 MTMR9Q96QG7 549 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 ERVK-6Q9BXR3 956 aa13.46□□□□□ -0.25
SIPA1L3-201ENST00000222345 TRAV6A0A075B6T7 132 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 POLR1CO15160 346 aaPredicted RBP13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 FOXN2P32314 431 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 FNTBP49356 437 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 PLA2G4EQ3MJ16 856 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 CCBE1Q6UXH8 406 aaPredicted RBP13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 PSKH2Q96QS6 385 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 M0R129 80 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 MTHFD1P11586 935 aaKnown RBP13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 ZNF709Q8N972 641 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 DNASE1L2Q92874 299 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 SRRDQ9UH36 339 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 DEPDC5O75140 1603 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 A0A1W2PPW3 197 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 HSBP1L1C9JCN9 74 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 VTNP04004 478 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 GJA1P17302 382 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 DSG2Q14126 1118 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 C17orf64Q86WR6 236 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 SGCDQ92629 289 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 ARL11Q969Q4 196 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 PWWP2AQ96N64 755 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 TMEM39BQ9GZU3 492 aa13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 RSPH9Q9H1X1 276 aaPredicted RBP13.46□□□□□ -0.26
SIPA1L3-201ENST00000222345 TSPAN1O60635 241 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 CAPN15O75808 1086 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 RENP00797 406 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 CFL1P23528 166 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 VAMP1P23763 118 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 CD6P30203 668 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 CRB2Q5IJ48 1285 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 DCLRE1AQ6PJP8 1040 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 PAOXQ6QHF9 649 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 SLC16A9Q7RTY1 509 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 CYP4X1Q8N118 509 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 FAM156AQ8NDB6 213 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 CANT1Q8WVQ1 401 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 AHCYL2Q96HN2 611 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 LGMNQ99538 433 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 TTYH2Q9BSA4 534 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 MKRN2Q9H000 416 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 CPSF4LA6NMK7 179 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 TFPTP0C1Z6 253 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 MECP2P51608 486 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 C2orf80Q0P641 193 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 SLC22A10Q63ZE4 541 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 GOLM1Q8NBJ4 401 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 BTBD1Q9H0C5 482 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 SMURF1Q9HCE7 757 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 ARMC1Q9NVT9 282 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 TMEM45AQ9NWC5 275 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 TVP23BQ9NYZ1 205 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 EXOSC1Q9Y3B2 195 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 H2AFB2P0C5Z0 115 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 HOXD8P13378 290 aaPredicted RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 CDH8P55286 799 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 ANKFN1Q8N957 763 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 PYURFQ96I23 114 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 TMED9Q9BVK6 235 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 PCDHAC1Q9H158 963 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 DNMT3LQ9UJW3 386 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 SLC27A6Q9Y2P4 619 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 SETD1AO15047 1707 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 RELAQ04206 551 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 APOLD1Q96LR9 279 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 NELFAQ9H3P2 528 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 NUFIP1Q9UHK0 495 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 TEX13CA0A0J9YWL9 993 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 ERAL1O75616 437 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 MMP8P22894 467 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 TUBG1P23258 451 aa13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 FASTKD3Q14CZ7 662 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
SIPA1L3-201ENST00000222345 C19orf12Q9NSK7 152 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms