RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 BFARQ9NZS9 450 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 PCOLCE2Q9UKZ9 415 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 INTS6Q9UL03 887 aaKnown RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 COPS3Q9UNS2 423 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 A3GALT2U3KPV4 340 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 NYNRINQ9P2P1 1898 aaKnown RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 PNMA8CA0A1B0GUJ8 204 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 TTC24A2A3L6 582 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 ERI2A8K979 691 aaKnown RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 SLC1A7O00341 560 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 BTN3A3O00478 584 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 STX7O15400 261 aaKnown RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 IRAK2O43187 625 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 H2AFYO75367 372 aaKnown RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 C1QBP02746 253 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 THRBP10828 461 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 FSHRP23945 695 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 MAOBP27338 520 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 PSMB9P28065 219 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 TM4SF4P48230 202 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 AP1S2P56377 157 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 ARHGAP36Q6ZRI8 547 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 RETREG3Q86VR2 466 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 COMMD7Q86VX2 200 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-201ENST00000220429 BLOC1S5Q8TDH9 187 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 OR2A14Q96R47 310 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 CPNE1Q99829 537 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 ZNF416Q9BWM5 594 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 SIK2Q9H0K1 926 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 SLC6A15Q9H2J7 730 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 CATSPERBQ9H7T0 1116 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 UBP1Q9NZI7 540 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 PCDHGB2Q9Y5G2 931 aa13.33□□□□□ -0.28
GABPB1-201ENST00000220429 FNDC1Q4ZHG4 1894 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 MYLKQ15746 1914 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TRAV20A0A0B4J274 112 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 E2F8A0AVK6 867 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 LOC110117498-PIK3R3F6TDL0 507 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 F8W036 122 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 SLCO1B7G3V0H7 640 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TNFRSF10BO14763 440 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 UGT2B17O75795 530 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 RAB3AP20336 220 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 RFX2P48378 723 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 UGT2B15P54855 530 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 SETMARQ53H47 684 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TTC23Q5W5X9 447 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 LAMTOR1Q6IAA8 161 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 LCN8Q6JVE9 175 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 CES5AQ6NT32 575 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 C8orf82Q6P1X6 216 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 RASGRP3Q8IV61 690 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 THEM5Q8N1Q8 247 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TXNDC5Q8NBS9 432 aaKnown RBP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 SGK3Q96BR1 496 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 PTERQ96BW5 349 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 MFSD3Q96ES6 412 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 FOPNLQ96NB1 174 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 VAT1Q99536 393 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 SPATA9Q9BWV2 254 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 KCTD5Q9NXV2 234 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 GPRC5BQ9NZH0 403 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 KLF15Q9UIH9 416 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TLR6Q9Y2C9 796 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 KLHL20Q9Y2M5 609 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 G3V2L1 256 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 GMDSO60547 372 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 PIGNO95427 931 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 OR4Q2P0C623 313 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 ELNP15502 786 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TYK2P29597 1187 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 ALDH3A2P51648 485 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 ARSFP54793 590 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 CD47Q08722 323 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 CYP51A1Q16850 503 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 SPANXN2Q5MJ10 180 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 ARTNQ5T4W7 220 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 SYT6Q5T7P8 510 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TIGD3Q6B0B8 471 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 MCOLN3Q8TDD5 553 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 MOCOSQ96EN8 888 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 PPP1R2P1Q96PQ5 205 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 AGAP2Q99490 1192 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 SDHCQ99643 169 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 CCDC32Q9BV29 185 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 ZBTB20Q9HC78 741 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-201ENST00000220429 PCDHB16Q9NRJ7 776 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 PRKAG2Q9UGJ0 569 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 RAPGEFL1Q9UHV5 662 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 ZDHHC2Q9UIJ5 367 aa13.32□□□□□ -0.28
GABPB1-201ENST00000220429 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 CNTN5O94779 1100 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 TPH1P17752 444 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 TYMPP19971 482 aa13.31□□□□□ -0.28
GABPB1-201ENST00000220429 MAP2K4P45985 399 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms