RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 UPF1Q92900 1129 aaKnown RBP eCLIP14.35□□□□□ -0.118e-7■■■□□ 15.4
SPTLC2-201ENST00000216484 CENPNQ96H22 339 aaPredicted RBP14.35□□□□□ -0.11
SPTLC2-201ENST00000216484 ZBTB45Q96K62 511 aaPredicted RBP14.35□□□□□ -0.11
SPTLC2-201ENST00000216484 ASB7Q9H672 318 aa14.35□□□□□ -0.11
SPTLC2-201ENST00000216484 LAMP5Q9UJQ1 280 aa14.35□□□□□ -0.11
SPTLC2-201ENST00000216484 TLL2Q9Y6L7 1015 aa14.35□□□□□ -0.11
SPTLC2-201ENST00000216484 NPIPA5E9PKD4 350 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 RAB5BP61020 215 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 VWA5B1Q5TIE3 1220 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 SLC22A16Q86VW1 577 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 DAGLBQ8NCG7 672 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 ZBED6CLQ96FA7 236 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 SNRNP25Q9BV90 132 aaKnown RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 BEX2Q9BXY8 128 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 SPATC1LQ9H0A9 340 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 BEX1Q9HBH7 125 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 NPIPA1Q9UND3 350 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 C1orf196B1AJZ1 125 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 C9JVG2 144 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 RGL2O15211 777 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 HSPA7P48741 367 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 NCBP2P52298 156 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 ATAD1Q8NBU5 361 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 LRRN4CLQ8ND94 238 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 PCDHB18PQ96TA0 734 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 B3GAT2Q9NPZ5 323 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 SCP2D1Q9UJQ7 156 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 A0A0J9YVX5 310 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 SHOX2O60902 331 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 GPIP06744 558 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 GET4Q7L5D6 327 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 RASGRP3Q8IV61 690 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 CCDC28AQ8IWP9 274 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 CRAMP1Q96RY5 1269 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 WDR77Q9BQA1 342 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 PHPT1Q9NRX4 125 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 GLYATL1P3A0A0U1RQE8 302 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 CENPBD1B2RD01 187 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 M0R233 179 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 TULP2O00295 520 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 MATKP42679 507 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 GCNT1Q02742 428 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 ZNF773Q6PK81 442 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 C12orf29Q8N999 325 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 FCAMRQ8WWV6 532 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 ENPP3O14638 875 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 ABLIM1O14639 778 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 SLC22A1O15245 554 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 MPIP34949 423 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 POLR2HP52434 150 aaKnown RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 GPR68Q15743 365 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 MLIPQ5VWP3 458 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 RIOX2Q8IUF8 465 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 PGAM4Q8N0Y7 254 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 ZBTB2Q8N680 514 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 ASB15Q8WXK1 588 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 SAV1Q9H4B6 383 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 AGO3Q9H9G7 860 aaKnown RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 MKKSQ9NPJ1 570 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 KIAA1522Q9P206 1035 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 CFL2Q9Y281 166 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 MDC1Q14676 2089 aaKnown RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 HTR3EA5X5Y0 456 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 OR2AG2A6NM03 316 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 LCKP06239 509 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 NUDT7P0C024 238 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 DRD4P21917 467 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 CRHR1P34998 444 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 AUHQ13825 339 aaKnown RBP14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 RNF157Q96PX1 679 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 TXN2Q99757 166 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 TLR10Q9BXR5 811 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 ARL8BQ9NVJ2 186 aa14.34□□□□□ -0.11
SPTLC2-201ENST00000216484 SPATA31D3P0C874 917 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 GRM3Q14832 879 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 SPATA31D4Q6ZUB0 917 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 ACBD4Q8NC06 268 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 ZNF510Q9Y2H8 683 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 PCDHGA6Q9Y5G7 932 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 ADORA2AP29274 412 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 CAP2P40123 477 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 FASTKD3Q14CZ7 662 aaKnown RBP14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 CNPY1Q3B7I2 92 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 CYP27C1Q4G0S4 372 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 TMEM214Q6NUQ4 689 aaKnown RBP14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 GPAT4Q86UL3 456 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 ARHGAP12Q8IWW6 846 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 OR4K2Q8NGD2 314 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 FRZBQ92765 325 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 GIMAP5Q96F15 307 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 TMEM41AQ96HV5 264 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 SLC35G5Q96KT7 338 aa14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 RPL36Q9Y3U8 105 aaKnown RBP14.33□□□□□ -0.11
SPTLC2-201ENST00000216484 TPPPO94811 219 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 TSPAN15O95858 294 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 CRISP1P54107 249 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 NFKB2Q00653 900 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 FAM174BQ3ZCQ3 159 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 CCDC58Q4VC31 144 aa14.33□□□□□ -0.12
SPTLC2-201ENST00000216484 DGAT2Q96PD7 388 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms