RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Eif2b3B1AUN2 452 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zfp395E9Q5N9 508 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gm20403G3UYB0 123 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Obox5G3X9P6 291 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Adra2bP30545 450 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 ClgnP52194 611 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 UrodP70697 367 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 BtrcQ3ULA2 605 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cpsf6Q6NVF9 551 aaKnown RBP9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Usp8Q80U87 1080 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Clptm1Q8VBZ3 664 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr1414Q8VGU5 312 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Edem1Q925U4 652 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fam136aQ9CR98 138 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gm26657Q9CVR1 127 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Glod5Q9D8I3 148 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Dtwd1Q9D8U7 304 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Plscr1Q9JJ00 328 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Apobec2Q9WV35 224 aa9.68□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr1480A0A140LIR8 359 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zfp352A2AML7 551 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Slc1a6O35544 561 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 UoxP25688 303 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Impdh1P50096 514 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 GckP52792 465 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 MazP56671 477 aaKnown RBP9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Xkr9Q5GH62 373 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Arhgap19Q8BRH3 494 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 ItchQ8C863 864 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ccm2Q8K2Y9 453 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Adap2Q8R2V5 381 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Usb1Q91W78 267 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Creld1Q91XD7 420 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Laptm4bQ91XQ6 227 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Trim33Q99PP7 1142 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Unc50Q9CQ61 259 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 RpainQ9CWY9 219 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 EbplQ9D0P0 206 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Clca1Q9D7Z6 913 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Skint1A7TZE6 364 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Il1rl1P14719 567 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 CratP47934 626 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 CtnsP57757 367 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tubal3Q3UX10 446 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 ChukQ60680 745 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mep1bQ61847 704 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Znf32Q80V23 272 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Shisa7Q8C3Q5 558 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rdh13Q8CEE7 334 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tmem198bQ8CFU0 350 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Arfip2Q8K221 341 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Nudt4Q8R2U6 179 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 ClyblQ8R4N0 338 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rbm47Q91WT8 590 aaKnown RBP9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mrpl37Q921S7 423 aaKnown RBP9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Trim8Q99PJ2 551 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Wdr45bQ9CR39 344 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rpl7a-ps3A0A140T8L1 270 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vmn2r46L7N282 809 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tpst2O88856 376 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Wnt1P04426 370 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 CatP24270 527 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 LdlrP35951 862 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rack1P68040 317 aaKnown RBP9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 4930430A15RikQ05AC5 485 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ccser2Q3UHI0 833 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Slc6a3Q61327 619 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PolnQ7TQ07 864 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Prkaa2Q8BRK8 552 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Calcoco1Q8CGU1 691 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rab7bQ8VEA8 199 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr1302Q8VGE9 315 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr394Q8VGR5 310 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Lrrc26Q91W20 331 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pcdhb8Q91XZ2 779 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rhobtb1Q9DAK3 695 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 FancgQ9EQR6 623 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rbck1Q9WUB0 508 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cib2Q9Z309 187 aa9.67□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Nup62clA2AG10 272 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Arl9F7BE40 171 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Bnc1O35914 961 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 MyogP12979 224 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Csrp3P50462 194 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gmeb2P58929 530 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ypel5P62700 121 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fahd2Q3TC72 313 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 A630001G21RikQ3UTB2 229 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Marveld2Q3UZP0 555 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 ProcrQ64695 242 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zmiz1Q6P1E1 1072 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Paqr3Q6TCG8 311 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Olfr1051Q7TR76 308 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zc3hav1lQ8BFR1 296 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pced1bQ8BGX1 433 aaKnown RBP9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vrk2Q8BN21 503 aaKnown RBP9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cxxc5Q91WA4 317 aaKnown RBP9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tceal1Q921P9 165 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rab28Q99KL7 221 aa9.66□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Uqcc2Q9CQY6 136 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 152.5 ms