RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Slc43a2Q8CGA3 568 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Syne4Q8CII8 388 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Hmgcll1Q8JZS7 343 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Bdh2Q8JZV9 245 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Prelid1Q8R107 217 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nol6Q8R5K4 1152 aaKnown RBP9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 CarfQ8VHI4 689 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mark1Q8VHJ5 795 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nipal2Q91WC7 383 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc31a2Q9CPU9 143 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rab13Q9DD03 202 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kcne4Q9WTW3 170 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nme4Q9WV84 186 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pcdhgb8A0A140LI48 931 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tmsb15aA2AEH9 79 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr1076A2AK60 313 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Abcb5B5X0E4 1255 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pdzd8B9EJ80 1147 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm3149E9PW52 257 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn2r14E9Q759 848 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm6408J3QNG1 320 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr1425K7N659 312 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm8362K7N6Y6 257 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nrp2O35375 931 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Prss39O70169 367 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 HunkO88866 714 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Klf10O89091 479 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 EporP14753 507 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cdkn2bP55271 130 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Wbp1P97764 304 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Muc1Q02496 630 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Qrich1Q3UA37 777 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 IspdQ5RJG7 447 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Myl6Q60605 151 aaKnown RBP9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Glra4Q61603 456 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nudcd1Q6PIP5 582 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Q8BHR8 331 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 CtsoQ8BM88 312 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tmem200aQ8C817 491 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 NaprtQ8CC86 538 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Lrrc66Q8K0B3 872 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 FlcnQ8QZS3 579 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr771Q8VFH6 317 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 TardbpQ921F2 414 aaKnown RBP9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mrpl41Q9CQN7 135 aaKnown RBP9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Arl5bQ9D4P0 179 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tprg1lQ9DBS2 266 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sorcs1Q9JLC4 1167 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm5565A0A0G2JGB2 317 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 C87414E9PWI7 475 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 IlkO55222 452 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Atxn2O70305 1285 aaKnown RBP9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Smyd5Q3TYX3 416 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Eif4e1bQ3UTA9 244 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ankrd28Q505D1 1053 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cdkn2cQ60772 168 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Acvrl1Q61288 502 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mvb12bQ6KAU4 317 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 DgkqQ6P5E8 934 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc9c1Q6UJY2 1175 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Znf507Q6ZPY5 941 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Naaladl1Q7M758 745 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pik3ip1Q7TMJ8 264 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Wdtc1Q80ZK9 677 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ccdc126Q8BIS8 140 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gpat3Q8C0N2 438 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nupl2Q8CIC2 420 aaKnown RBP9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mkl1Q8K4J6 964 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Igsf8Q8R366 611 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ccm2lQ8VCC6 481 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Epsti1Q8VDI1 314 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rnf130Q8VEM1 419 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Acss1Q99NB1 682 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mrps17Q9CQE3 120 aaKnown RBP9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Uqcrc1Q9CZ13 480 aaKnown RBP9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 NtsQ9D3P9 169 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cab39lQ9DB16 337 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Aqp9Q9JJJ3 295 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cntn6Q9JMB8 1028 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Prmt2Q9R144 448 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cldn3Q9Z0G9 219 aa9.54□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Skint10A7TZG1 354 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp40B1B1D3 796 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr521E9Q519 321 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn2r92L7N2A4 860 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gosr2O35166 212 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Svs4P18419 113 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 PtgirP43252 415 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 StsP50427 624 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Efna1P52793 205 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zscan2Q07230 614 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cpne7Q0VE82 557 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Teddm2Q208S0 260 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cyb5r2Q3KNK3 276 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Abi3bpQ59IW6 1179 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Taar7dQ5QD10 358 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp78Q5U406 512 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zmpste24Q80W54 475 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cdkn3Q810P3 211 aa9.53□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nim1kQ8BHI9 436 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 280.9 ms