RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W HDA2Q06629 674 aa4.73□□□□□ -1.65
VPS27YNR006W YLR001CQ07895 862 aa4.73□□□□□ -1.65
VPS27YNR006W SEC23P15303 768 aaKnown RBP4.72□□□□□ -1.65
VPS27YNR006W DPB3P27344 201 aa4.72□□□□□ -1.65
VPS27YNR006W MKK2P32491 506 aa4.72□□□□□ -1.65
VPS27YNR006W SQT1P35184 431 aa4.72□□□□□ -1.65
VPS27YNR006W RER2P35196 286 aa4.72□□□□□ -1.65
VPS27YNR006W PBY1P38254 753 aa4.72□□□□□ -1.65
VPS27YNR006W NOC2P39744 710 aaKnown RBP4.72□□□□□ -1.65
VPS27YNR006W YGL140CP53120 1219 aa4.72□□□□□ -1.65
VPS27YNR006W UME1Q03010 460 aa4.72□□□□□ -1.65
VPS27YNR006W YLR225CQ05948 407 aaKnown RBP4.72□□□□□ -1.65
VPS27YNR006W THI73Q07904 523 aa4.72□□□□□ -1.65
VPS27YNR006W MSH3P25336 1018 aa4.71□□□□□ -1.66
VPS27YNR006W LYP1P32487 611 aa4.71□□□□□ -1.66
VPS27YNR006W LSB6P42951 607 aa4.71□□□□□ -1.66
VPS27YNR006W YNL034WP53963 612 aa4.71□□□□□ -1.66
VPS27YNR006W YNL018CP53976 612 aa4.71□□□□□ -1.66
VPS27YNR006W PEX13P80667 386 aa4.71□□□□□ -1.66
VPS27YNR006W REC8Q12188 680 aa4.71□□□□□ -1.66
VPS27YNR006W NUP145P49687 1317 aa4.71□□□□□ -1.66
VPS27YNR006W EUG1P32474 517 aa4.71□□□□□ -1.66
VPS27YNR006W YBR071WP38243 211 aa4.71□□□□□ -1.66
VPS27YNR006W ALR2P43553 858 aa4.71□□□□□ -1.66
VPS27YNR006W YPL062WQ02781 134 aa4.71□□□□□ -1.66
VPS27YNR006W MTC5Q03897 1148 aa4.71□□□□□ -1.66
VPS27YNR006W NYV1Q12255 253 aa4.71□□□□□ -1.66
VPS27YNR006W HTS1P07263 546 aaKnown RBP4.7□□□□□ -1.66
VPS27YNR006W EXO5P38289 585 aa4.7□□□□□ -1.66
VPS27YNR006W MPD2Q99316 277 aa4.7□□□□□ -1.66
VPS27YNR006W SST2P11972 698 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W PGI1P12709 554 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W RPN12P32496 274 aa4.69□□□□□ -1.66
VPS27YNR006W MTC2P34246 357 aa4.69□□□□□ -1.66
VPS27YNR006W RDH54P38086 958 aa4.69□□□□□ -1.66
VPS27YNR006W PEA2P40091 420 aa4.69□□□□□ -1.66
VPS27YNR006W FET4P40988 552 aa4.69□□□□□ -1.66
VPS27YNR006W SEC26P41810 973 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W GUP1P53154 560 aa4.69□□□□□ -1.66
VPS27YNR006W SIW14P53965 281 aa4.69□□□□□ -1.66
VPS27YNR006W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
VPS27YNR006W ENT2Q05785 613 aa4.69□□□□□ -1.66
VPS27YNR006W YDL176WQ12027 708 aa4.69□□□□□ -1.66
VPS27YNR006W MDM12Q92328 271 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-LR4P0C2I8 440 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W TY1A-DR6P0CX70 440 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-ER1P0CX71 440 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-LR2P0CX72 440 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-PLP0CX73 440 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-JR1P0CX74 440 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-LR3P0CX75 440 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-ML2P0CX76 440 aa4.69□□□□□ -1.66
VPS27YNR006W YEF3P16521 1044 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W MOT2P34909 587 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W YKL222CP35995 705 aa4.69□□□□□ -1.66
VPS27YNR006W SHU2P38957 223 aa4.69□□□□□ -1.66
VPS27YNR006W VID27P40157 782 aa4.69□□□□□ -1.66
VPS27YNR006W UBX4P54730 416 aa4.69□□□□□ -1.66
VPS27YNR006W HAS1Q03532 505 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W GIC2Q06648 383 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-GR1Q12085 440 aa4.69□□□□□ -1.66
VPS27YNR006W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W TY1A-OLQ92392 440 aaKnown RBP4.69□□□□□ -1.66
VPS27YNR006W TOP3P13099 656 aa4.68□□□□□ -1.66
VPS27YNR006W PDC5P16467 563 aaKnown RBP4.68□□□□□ -1.66
VPS27YNR006W PLC1P32383 869 aa4.68□□□□□ -1.66
VPS27YNR006W NFU1P32860 256 aa4.68□□□□□ -1.66
VPS27YNR006W GEM1P39722 662 aa4.68□□□□□ -1.66
VPS27YNR006W MTR4P47047 1073 aaKnown RBP4.68□□□□□ -1.66
VPS27YNR006W YDL124WQ07551 312 aaKnown RBP4.68□□□□□ -1.66
VPS27YNR006W FAP7Q12055 197 aaPredicted RBP4.68□□□□□ -1.66
VPS27YNR006W GPM1P00950 247 aaKnown RBP4.67□□□□□ -1.66
VPS27YNR006W TAF13P11747 167 aa4.67□□□□□ -1.66
VPS27YNR006W KNS1P32350 737 aaPredicted RBP4.67□□□□□ -1.66
VPS27YNR006W MFT1P33441 392 aaKnown RBP4.67□□□□□ -1.66
VPS27YNR006W NEO1P40527 1151 aa4.67□□□□□ -1.66
VPS27YNR006W PEX14P53112 341 aa4.67□□□□□ -1.66
VPS27YNR006W SOK2P53438 785 aaPredicted RBP4.67□□□□□ -1.66
VPS27YNR006W YPL066WQ12194 479 aa4.67□□□□□ -1.66
VPS27YNR006W HBN1Q96VH4 193 aa4.67□□□□□ -1.66
VPS27YNR006W MPH2P0CD99 609 aa4.66□□□□□ -1.66
VPS27YNR006W INO1P11986 533 aa4.66□□□□□ -1.66
VPS27YNR006W NAR1P23503 491 aaKnown RBP4.66□□□□□ -1.66
VPS27YNR006W HBS1P32769 611 aaKnown RBP4.66□□□□□ -1.66
VPS27YNR006W YKL077WP36081 392 aa4.66□□□□□ -1.66
VPS27YNR006W MBP1P39678 833 aa4.66□□□□□ -1.66
VPS27YNR006W KRI1P42846 591 aaKnown RBP4.66□□□□□ -1.66
VPS27YNR006W PIP2P52960 996 aa4.66□□□□□ -1.66
VPS27YNR006W SPC105P53148 917 aa4.66□□□□□ -1.66
VPS27YNR006W SDA1P53313 767 aaKnown RBP4.66□□□□□ -1.66
VPS27YNR006W ESF2P53743 316 aaKnown RBP4.66□□□□□ -1.66
VPS27YNR006W ROD1Q02805 837 aa4.66□□□□□ -1.66
VPS27YNR006W YIG1Q08956 461 aa4.66□□□□□ -1.66
VPS27YNR006W PRP9P19736 530 aaKnown RBP4.66□□□□□ -1.66
VPS27YNR006W TYS1P36421 394 aaKnown RBP4.66□□□□□ -1.66
VPS27YNR006W NEM1P38757 446 aa4.66□□□□□ -1.66
VPS27YNR006W GIP2P40036 548 aa4.66□□□□□ -1.66
VPS27YNR006W MGS1P40151 587 aa4.66□□□□□ -1.66
VPS27YNR006W RPT2P40327 437 aaKnown RBP4.66□□□□□ -1.66
VPS27YNR006W LEM3P42838 414 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms