RNA–Protein interactions for RNA: YNL101W

AVT4, Transcript of Vacuolar transporter, yeastyeast

Gene AVT4, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT4YNL101W PET122P10355 254 aa6.88□□□□□ -1.31
AVT4YNL101W EFB1P32471 206 aaKnown RBP6.88□□□□□ -1.31
AVT4YNL101W HEK2P38199 381 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31 RIP-Chip
AVT4YNL101W SPP381P38282 291 aaPredicted RBP6.88□□□□□ -1.31
AVT4YNL101W SPO71Q03868 1245 aa6.88□□□□□ -1.31
AVT4YNL101W PPM1Q04081 328 aa6.88□□□□□ -1.31
AVT4YNL101W CAB1Q04430 367 aa6.88□□□□□ -1.31
AVT4YNL101W AFT2Q08957 416 aa6.88□□□□□ -1.31
AVT4YNL101W PIF1P07271 859 aa6.88□□□□□ -1.31
AVT4YNL101W RPS6AP0CX37 236 aaKnown RBP6.88□□□□□ -1.31
AVT4YNL101W RPS6BP0CX38 236 aaPredicted RBP6.88□□□□□ -1.31
AVT4YNL101W MRE11P32829 692 aa6.88□□□□□ -1.31
AVT4YNL101W YLF2P38746 405 aa6.88□□□□□ -1.31
AVT4YNL101W SET1P38827 1080 aaKnown RBP6.88□□□□□ -1.31
AVT4YNL101W BTN2P53286 410 aa6.88□□□□□ -1.31
AVT4YNL101W YMR111CQ04461 462 aaPredicted RBP6.88□□□□□ -1.31
AVT4YNL101W BUD7Q08754 746 aa6.88□□□□□ -1.31
AVT4YNL101W NUP188P52593 1655 aaKnown RBP6.87□□□□□ -1.31
AVT4YNL101W MTF2P10849 440 aa6.87□□□□□ -1.31
AVT4YNL101W REC107P21651 314 aa6.87□□□□□ -1.31
AVT4YNL101W UGA3P26370 528 aa6.87□□□□□ -1.31
AVT4YNL101W BOI1P38041 980 aaKnown RBP6.87□□□□□ -1.31
AVT4YNL101W MUM2P38236 366 aa6.87□□□□□ -1.31
AVT4YNL101W ETP1P38748 585 aaKnown RBP6.87□□□□□ -1.31
AVT4YNL101W ENP2P48234 707 aaKnown RBP6.87□□□□□ -1.31
AVT4YNL101W YLH47Q06493 454 aa6.87□□□□□ -1.31
AVT4YNL101W ATG13Q06628 738 aa6.87□□□□□ -1.31
AVT4YNL101W SEC7P11075 2009 aaKnown RBP6.87□□□□□ -1.31
AVT4YNL101W RAD57P25301 460 aa6.86□□□□□ -1.31
AVT4YNL101W MVD1P32377 396 aaKnown RBP6.86□□□□□ -1.31
AVT4YNL101W CBF2P32504 956 aa6.86□□□□□ -1.31
AVT4YNL101W OAF3P36023 863 aa6.86□□□□□ -1.31
AVT4YNL101W ATG14P38270 344 aa6.86□□□□□ -1.31
AVT4YNL101W PXA1P41909 870 aa6.86□□□□□ -1.31
AVT4YNL101W MCM6P53091 1017 aaKnown RBP6.86□□□□□ -1.31
AVT4YNL101W ERG5P54781 538 aa6.86□□□□□ -1.31
AVT4YNL101W NGL3Q03210 505 aa6.86□□□□□ -1.31
AVT4YNL101W NOB1Q08444 459 aaKnown RBP6.86□□□□□ -1.31
AVT4YNL101W AKL1P38080 1108 aaKnown RBP6.86□□□□□ -1.31
AVT4YNL101W ECM21P38167 1117 aaKnown RBP6.86□□□□□ -1.31
AVT4YNL101W UBP13P38187 747 aa6.86□□□□□ -1.31
AVT4YNL101W CCT2P39076 527 aaKnown RBP6.86□□□□□ -1.31
AVT4YNL101W RSM24Q03976 319 aa6.86□□□□□ -1.31
AVT4YNL101W PSK2Q08217 1101 aa6.86□□□□□ -1.31
AVT4YNL101W SGT2Q12118 346 aaKnown RBP6.86□□□□□ -1.31
AVT4YNL101W GPR1Q12361 961 aa6.86□□□□□ -1.31
AVT4YNL101W ENO1P00924 437 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W MST1P07236 462 aa6.85□□□□□ -1.31
AVT4YNL101W BAS1P22035 811 aa6.85□□□□□ -1.31
AVT4YNL101W ADY2P25613 283 aa6.85□□□□□ -1.31
AVT4YNL101W LAS1P36146 502 aaPredicted RBP6.85□□□□□ -1.31
AVT4YNL101W RFT1P38206 574 aaPredicted RBP6.85□□□□□ -1.31
AVT4YNL101W MPT5P39016 859 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
AVT4YNL101W SET2P46995 733 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W IMD4P50094 524 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W BNI4P53858 892 aa6.85□□□□□ -1.31
AVT4YNL101W MRD1Q06106 887 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W PIG1Q06216 648 aa6.85□□□□□ -1.31
AVT4YNL101W RRP6Q12149 733 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W HTZ1Q12692 134 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W PYC1P11154 1178 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W MLS1P30952 554 aa6.85□□□□□ -1.31
AVT4YNL101W PYC2P32327 1180 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W YHL017WP38745 532 aa6.85□□□□□ -1.31
AVT4YNL101W SSZ1P38788 538 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W TIF4631P39935 952 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W SHQ1P40486 507 aaPredicted RBP6.85□□□□□ -1.31
AVT4YNL101W SPO22P40511 975 aa6.85□□□□□ -1.31
AVT4YNL101W ESBP6P53918 673 aa6.85□□□□□ -1.31
AVT4YNL101W YML108WQ03759 105 aa6.85□□□□□ -1.31
AVT4YNL101W VPS64Q03944 604 aa6.85□□□□□ -1.31
AVT4YNL101W HCR1Q05775 265 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W RIX7Q07844 837 aaKnown RBP6.85□□□□□ -1.31
AVT4YNL101W NSE1Q07913 336 aa6.85□□□□□ -1.31
AVT4YNL101W YIG1Q08956 461 aa6.85□□□□□ -1.31
AVT4YNL101W DCS2Q12123 353 aa6.85□□□□□ -1.31
AVT4YNL101W COQ4O13525 335 aa6.84□□□□□ -1.31
AVT4YNL101W RAD4P14736 754 aa6.84□□□□□ -1.31
AVT4YNL101W SPO12P17123 173 aa6.84□□□□□ -1.31
AVT4YNL101W THR1P17423 357 aaKnown RBP6.84□□□□□ -1.31
AVT4YNL101W SMY2P32909 740 aaKnown RBP6.84□□□□□ -1.31
AVT4YNL101W YET1P35723 206 aa6.84□□□□□ -1.31
AVT4YNL101W ADE17P38009 592 aaKnown RBP6.84□□□□□ -1.31
AVT4YNL101W BRL1P38770 471 aa6.84□□□□□ -1.31
AVT4YNL101W CIC1P38779 376 aaKnown RBP6.84□□□□□ -1.31
AVT4YNL101W NAB3P38996 802 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
AVT4YNL101W YEL023CP39992 682 aa6.84□□□□□ -1.31
AVT4YNL101W BUD6P41697 788 aa6.84□□□□□ -1.31
AVT4YNL101W ECL1P48235 211 aa6.84□□□□□ -1.31
AVT4YNL101W SQS1P53866 767 aaKnown RBP6.84□□□□□ -1.31
AVT4YNL101W DNL4Q08387 944 aaPredicted RBP6.84□□□□□ -1.31
AVT4YNL101W TFB4Q12004 338 aa6.84□□□□□ -1.31
AVT4YNL101W HMI1Q12039 706 aa6.84□□□□□ -1.31
AVT4YNL101W MSH5Q12175 901 aa6.84□□□□□ -1.31
AVT4YNL101W YRF1-2P40105 1681 aa6.84□□□□□ -1.31
AVT4YNL101W RGP1P16664 663 aa6.83□□□□□ -1.32
AVT4YNL101W ADE2P21264 571 aaKnown RBP6.83□□□□□ -1.32
AVT4YNL101W SEC20P28791 383 aa6.83□□□□□ -1.32
AVT4YNL101W UGA2P38067 497 aa6.83□□□□□ -1.32
AVT4YNL101W EFM2P38347 419 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms