RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C SRM1P21827 482 aa6.38□□□□□ -1.39
SSK1YLR006C YKL133CP36066 463 aa6.38□□□□□ -1.39
SSK1YLR006C GRS1P38088 690 aaKnown RBP6.38□□□□□ -1.39
SSK1YLR006C MAL33P38157 468 aa6.38□□□□□ -1.39
SSK1YLR006C GPP1P41277 250 aaKnown RBP6.38□□□□□ -1.39
SSK1YLR006C AAD16Q02895 342 aa6.38□□□□□ -1.39
SSK1YLR006C CWC15Q03772 175 aaKnown RBP6.38□□□□□ -1.39
SSK1YLR006C SPR28Q04921 423 aa6.38□□□□□ -1.39
SSK1YLR006C TFC8Q12308 588 aa6.38□□□□□ -1.39
SSK1YLR006C GYP5Q12344 894 aa6.38□□□□□ -1.39
SSK1YLR006C DDP1Q99321 188 aaKnown RBP6.38□□□□□ -1.39
SSK1YLR006C RPL5P26321 297 aaKnown RBP6.37□□□□□ -1.39
SSK1YLR006C ATG19P35193 415 aa6.37□□□□□ -1.39
SSK1YLR006C YHL017WP38745 532 aa6.37□□□□□ -1.39
SSK1YLR006C RRM3P38766 723 aa6.37□□□□□ -1.39
SSK1YLR006C YMR147WP40218 223 aaKnown RBP6.37□□□□□ -1.39
SSK1YLR006C TYW1Q08960 810 aaKnown RBP6.37□□□□□ -1.39
SSK1YLR006C YPL150WQ12152 901 aa6.37□□□□□ -1.39
SSK1YLR006C SAC3P46674 1301 aa6.37□□□□□ -1.39
SSK1YLR006C TUF1P02992 437 aaKnown RBP6.37□□□□□ -1.39
SSK1YLR006C APN1P22936 367 aa6.37□□□□□ -1.39
SSK1YLR006C NOP4P37838 685 aaKnown RBP6.37□□□□□ -1.39
SSK1YLR006C TCD1P38756 429 aa6.37□□□□□ -1.39
SSK1YLR006C RTT105P40063 208 aa6.37□□□□□ -1.39
SSK1YLR006C ESL1P40456 1118 aa6.37□□□□□ -1.39
SSK1YLR006C SRB7P47822 140 aa6.37□□□□□ -1.39
SSK1YLR006C YNL193WP53870 558 aa6.37□□□□□ -1.39
SSK1YLR006C RPN7Q06103 429 aaKnown RBP6.37□□□□□ -1.39
SSK1YLR006C CTI6Q08923 506 aa6.37□□□□□ -1.39
SSK1YLR006C PGC1Q08959 321 aa6.37□□□□□ -1.39
SSK1YLR006C TMA17Q12513 150 aa6.37□□□□□ -1.39
SSK1YLR006C ENO2P00925 437 aaKnown RBP6.36□□□□□ -1.39
SSK1YLR006C NIP100P33420 868 aa6.36□□□□□ -1.39
SSK1YLR006C EPL1P43572 832 aa6.36□□□□□ -1.39
SSK1YLR006C DAS1P47005 663 aa6.36□□□□□ -1.39
SSK1YLR006C REX2P54964 269 aaKnown RBP6.36□□□□□ -1.39
SSK1YLR006C YLL054CQ12244 843 aa6.36□□□□□ -1.39
SSK1YLR006C MATALPHA2P0CY08 210 aa6.35□□□□□ -1.39
SSK1YLR006C HMLALPHA2P0CY09 210 aa6.35□□□□□ -1.39
SSK1YLR006C PEP3P27801 918 aa6.35□□□□□ -1.39
SSK1YLR006C FBP26P32604 452 aa6.35□□□□□ -1.39
SSK1YLR006C PEP12P32854 288 aa6.35□□□□□ -1.39
SSK1YLR006C ARC19P33204 171 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C LTV1P34078 463 aa6.35□□□□□ -1.39
SSK1YLR006C CCT3P39077 534 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C VPS4P52917 437 aa6.35□□□□□ -1.39
SSK1YLR006C YGL082WP53155 381 aa6.35□□□□□ -1.39
SSK1YLR006C ARV1Q06541 321 aa6.35□□□□□ -1.39
SSK1YLR006C TUM1Q08686 304 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C TOM70P07213 617 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C PGI1P12709 554 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C ARG8P18544 423 aa6.35□□□□□ -1.39
SSK1YLR006C SEC18P18759 758 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C GUT1P32190 709 aa6.35□□□□□ -1.39
SSK1YLR006C PSE1P32337 1089 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C YHR020WP38708 688 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C OSH3P38713 996 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C MEF2P39677 819 aa6.35□□□□□ -1.39
SSK1YLR006C CTH1P47976 325 aa6.35□□□□□ -1.39
SSK1YLR006C UBP16Q02863 499 aa6.35□□□□□ -1.39
SSK1YLR006C NUT2Q06213 157 aa6.35□□□□□ -1.39
SSK1YLR006C WRS1Q12109 432 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C RUD3Q12234 484 aaKnown RBP6.35□□□□□ -1.39
SSK1YLR006C RGP1P16664 663 aa6.34□□□□□ -1.39
SSK1YLR006C MEF1P25039 761 aa6.34□□□□□ -1.39
SSK1YLR006C COQ8P27697 501 aa6.34□□□□□ -1.39
SSK1YLR006C BBC1P47068 1157 aa6.34□□□□□ -1.39
SSK1YLR006C RIM21P48565 533 aa6.34□□□□□ -1.39
SSK1YLR006C WAR1Q03631 944 aa6.34□□□□□ -1.39
SSK1YLR006C SRC1Q03707 834 aa6.34□□□□□ -1.39
SSK1YLR006C RRP36Q12481 300 aaPredicted RBP6.34□□□□□ -1.39
SSK1YLR006C ENT1Q12518 454 aa6.34□□□□□ -1.39
SSK1YLR006C MGE1P38523 228 aa6.34□□□□□ -1.4
SSK1YLR006C YPT11P48559 417 aa6.34□□□□□ -1.4
SSK1YLR006C BTN2P53286 410 aa6.34□□□□□ -1.4
SSK1YLR006C UBX4P54730 416 aa6.34□□□□□ -1.4
SSK1YLR006C ISA1Q07821 250 aaPredicted RBP6.34□□□□□ -1.4
SSK1YLR006C ALR1Q08269 859 aa6.34□□□□□ -1.4
SSK1YLR006C TMA7Q3E764 64 aaKnown RBP6.34□□□□□ -1.4
SSK1YLR006C DCD1P06773 312 aa6.33□□□□□ -1.4
SSK1YLR006C SPS1P08458 490 aa6.33□□□□□ -1.4
SSK1YLR006C PHO8P11491 566 aa6.33□□□□□ -1.4
SSK1YLR006C HCA4P20448 770 aaKnown RBP6.33□□□□□ -1.4
SSK1YLR006C ACE2P21192 770 aa6.33□□□□□ -1.4
SSK1YLR006C GSY2P27472 705 aa6.33□□□□□ -1.4
SSK1YLR006C YKR023WP36119 530 aaKnown RBP6.33□□□□□ -1.4
SSK1YLR006C CEP3P40969 608 aa6.33□□□□□ -1.4
SSK1YLR006C CLP1Q08685 445 aaPredicted RBP6.33□□□□□ -1.4
SSK1YLR006C YOR131CQ12486 218 aa6.33□□□□□ -1.4
SSK1YLR006C RED1P14291 827 aa6.32□□□□□ -1.4
SSK1YLR006C RPL8AP17076 256 aaKnown RBP6.32□□□□□ -1.4
SSK1YLR006C GRX1P25373 110 aaKnown RBP6.32□□□□□ -1.4
SSK1YLR006C SER1P33330 395 aaKnown RBP6.32□□□□□ -1.4
SSK1YLR006C JNM1P36224 373 aa6.32□□□□□ -1.4
SSK1YLR006C BOL3P39724 118 aa6.32□□□□□ -1.4
SSK1YLR006C ARB1P40024 610 aaKnown RBP6.32□□□□□ -1.4
SSK1YLR006C RAD26P40352 1085 aa6.32□□□□□ -1.4
SSK1YLR006C PRP31P49704 494 aaPredicted RBP6.32□□□□□ -1.4
SSK1YLR006C NNF2P53253 936 aa6.32□□□□□ -1.4
SSK1YLR006C YDR090CQ03193 310 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms