RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 PARP3Q9Y6F1 533 aa20.86■□□□□ 0.93
SRRM4-204ENST00000641899 FCHSD2O94868 740 aa20.85■□□□□ 0.93
SRRM4-204ENST00000641899 PHKG2P15735 406 aa20.85■□□□□ 0.93
SRRM4-204ENST00000641899 RFC4P35249 363 aa20.85■□□□□ 0.93
SRRM4-204ENST00000641899 ITPK1Q13572 414 aa20.85■□□□□ 0.93
SRRM4-204ENST00000641899 PLEKHG2Q9H7P9 1386 aa20.85■□□□□ 0.93
SRRM4-204ENST00000641899 ATG3Q9NT62 314 aa20.84■□□□□ 0.93
SRRM4-204ENST00000641899 CICQ96RK0 1608 aaPredicted RBP20.84■□□□□ 0.93
SRRM4-204ENST00000641899 NCAPD2Q15021 1401 aa20.84■□□□□ 0.93
SRRM4-204ENST00000641899 PXDNLA1KZ92 1463 aa20.83■□□□□ 0.93
SRRM4-204ENST00000641899 A0A0G2JLW4 131 aa20.83■□□□□ 0.93
SRRM4-204ENST00000641899 RC3H1Q5TC82 1133 aaKnown RBP20.83■□□□□ 0.93
SRRM4-204ENST00000641899 RBM46Q8TBY0 533 aaKnown RBP20.83■□□□□ 0.93
SRRM4-204ENST00000641899 EYA1Q99502 592 aa20.83■□□□□ 0.93
SRRM4-204ENST00000641899 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
SRRM4-204ENST00000641899 ERVV-2B6SEH9 535 aa20.82■□□□□ 0.92
SRRM4-204ENST00000641899 RBM42Q9BTD8 480 aaKnown RBP20.82■□□□□ 0.92
SRRM4-204ENST00000641899 PKD1L3Q7Z443 1732 aa20.81■□□□□ 0.92
SRRM4-204ENST00000641899 KDM2BQ8NHM5 1336 aa20.81■□□□□ 0.92
SRRM4-204ENST00000641899 FSTL1Q12841 308 aa20.81■□□□□ 0.92
SRRM4-204ENST00000641899 TOGARAM1Q9Y4F4 1720 aa20.81■□□□□ 0.92
SRRM4-204ENST00000641899 PIM2Q9P1W9 311 aa20.8■□□□□ 0.92
SRRM4-204ENST00000641899 CNTNAP4Q9C0A0 1308 aa20.79■□□□□ 0.92
SRRM4-204ENST00000641899 C10orf71Q711Q0 1435 aa20.79■□□□□ 0.92
SRRM4-204ENST00000641899 RPS6KA4O75676 772 aa20.79■□□□□ 0.92
SRRM4-204ENST00000641899 DPEP1P16444 411 aa20.79■□□□□ 0.92
SRRM4-204ENST00000641899 DNAJC5GQ8N7S2 189 aa20.79■□□□□ 0.92
SRRM4-204ENST00000641899 ARHGEF1Q92888 912 aaKnown RBP20.79■□□□□ 0.92
SRRM4-204ENST00000641899 DCAF5Q96JK2 942 aa20.79■□□□□ 0.92
SRRM4-204ENST00000641899 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
SRRM4-204ENST00000641899 NMRK2Q9NPI5 230 aa20.78■□□□□ 0.92
SRRM4-204ENST00000641899 ITGB4P16144 1822 aa20.78■□□□□ 0.92
SRRM4-204ENST00000641899 KIF20BQ96Q89 1820 aa20.77■□□□□ 0.92
SRRM4-204ENST00000641899 GYS1P13807 737 aa20.77■□□□□ 0.92
SRRM4-204ENST00000641899 PLEKHO1Q53GL0 409 aaPredicted RBP20.77■□□□□ 0.92
SRRM4-204ENST00000641899 C9orf131Q5VYM1 1079 aa20.77■□□□□ 0.92
SRRM4-204ENST00000641899 CABP4P57796 275 aa20.76■□□□□ 0.91
SRRM4-204ENST00000641899 AMOTQ4VCS5 1084 aa20.76■□□□□ 0.91
SRRM4-204ENST00000641899 DALRD3Q5D0E6 543 aaKnown RBP20.76■□□□□ 0.91
SRRM4-204ENST00000641899 KDRP35968 1356 aa20.75■□□□□ 0.91
SRRM4-204ENST00000641899 KLRG1Q96E93 195 aa20.75■□□□□ 0.91
SRRM4-204ENST00000641899 POLKQ9UBT6 870 aa20.75■□□□□ 0.91
SRRM4-204ENST00000641899 MAP2P11137 1827 aaKnown RBP20.74■□□□□ 0.91
SRRM4-204ENST00000641899 EIF4A2Q14240 407 aaKnown RBP20.72■□□□□ 0.91
SRRM4-204ENST00000641899 C1orf141Q5JVX7 400 aa20.72■□□□□ 0.91
SRRM4-204ENST00000641899 RNF181Q9P0P0 153 aa20.72■□□□□ 0.91
SRRM4-204ENST00000641899 MTHFSP49914 203 aa20.7■□□□□ 0.9
SRRM4-204ENST00000641899 ZNF530Q6P9A1 599 aaPredicted RBP20.7■□□□□ 0.9
SRRM4-204ENST00000641899 JMYQ8N9B5 988 aa20.7■□□□□ 0.9
SRRM4-204ENST00000641899 SMC1BQ8NDV3 1235 aa20.7■□□□□ 0.9
SRRM4-204ENST00000641899 ZC3H4Q9UPT8 1303 aaKnown RBP20.7■□□□□ 0.9
SRRM4-204ENST00000641899 KIF13BQ9NQT8 1826 aa20.69■□□□□ 0.9
SRRM4-204ENST00000641899 SLC4A9Q96Q91 983 aa20.69■□□□□ 0.9
SRRM4-204ENST00000641899 C4AP0C0L4 1744 aa20.68■□□□□ 0.9
SRRM4-204ENST00000641899 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
SRRM4-204ENST00000641899 KCNA3P22001 575 aa20.68■□□□□ 0.9
SRRM4-204ENST00000641899 TNNT2P45379 298 aaPredicted RBP20.68■□□□□ 0.9
SRRM4-204ENST00000641899 ZPR1O75312 459 aa20.67■□□□□ 0.9
SRRM4-204ENST00000641899 CRKLP46109 303 aaKnown RBP20.67■□□□□ 0.9
SRRM4-204ENST00000641899 USP42Q9H9J4 1324 aaKnown RBP20.67■□□□□ 0.9
SRRM4-204ENST00000641899 ZNF831Q5JPB2 1677 aa20.67■□□□□ 0.9
SRRM4-204ENST00000641899 RRAGCQ9HB90 399 aa20.66■□□□□ 0.9
SRRM4-204ENST00000641899 ANKRD26Q9UPS8 1709 aa20.66■□□□□ 0.9
SRRM4-204ENST00000641899 N4BP2Q86UW6 1770 aaPredicted RBP20.64■□□□□ 0.9
SRRM4-204ENST00000641899 FKBP8Q14318 412 aa20.64■□□□□ 0.89
SRRM4-204ENST00000641899 TNS4Q8IZW8 715 aa20.64■□□□□ 0.89
SRRM4-204ENST00000641899 POLR3GLQ9BT43 218 aa20.64■□□□□ 0.89
SRRM4-204ENST00000641899 KCPQ6ZWJ8 1503 aa20.63■□□□□ 0.89
SRRM4-204ENST00000641899 KIAA1551Q9HCM1 1747 aa20.62■□□□□ 0.89
SRRM4-204ENST00000641899 VEGFAP15692 232 aaPredicted RBP20.62■□□□□ 0.89
SRRM4-204ENST00000641899 NFATC2IPQ8NCF5 419 aa20.62■□□□□ 0.89
SRRM4-204ENST00000641899 SRP68Q9UHB9 627 aaKnown RBP20.62■□□□□ 0.89
SRRM4-204ENST00000641899 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
SRRM4-204ENST00000641899 CHRNA5P30532 468 aa20.61■□□□□ 0.89
SRRM4-204ENST00000641899 HTRA3P83110 453 aa20.61■□□□□ 0.89
SRRM4-204ENST00000641899 COL13A1Q5TAT6 717 aaPredicted RBP20.61■□□□□ 0.89
SRRM4-204ENST00000641899 TIMELESSQ9UNS1 1208 aa20.61■□□□□ 0.89
SRRM4-204ENST00000641899 POLRMTO00411 1230 aaKnown RBP20.6■□□□□ 0.89
SRRM4-204ENST00000641899 LMNB1P20700 586 aa20.6■□□□□ 0.89
SRRM4-204ENST00000641899 DDR1Q08345 913 aa20.6■□□□□ 0.89
SRRM4-204ENST00000641899 KDM6AO15550 1401 aaPredicted RBP20.6■□□□□ 0.89
SRRM4-204ENST00000641899 CAPN15O75808 1086 aa20.58■□□□□ 0.89
SRRM4-204ENST00000641899 TM4SF1P30408 202 aa20.58■□□□□ 0.89
SRRM4-204ENST00000641899 GLTPD2A6NH11 291 aa20.57■□□□□ 0.88
SRRM4-204ENST00000641899 PRELPP51888 382 aa20.57■□□□□ 0.88
SRRM4-204ENST00000641899 DPY19L2Q6NUT2 758 aa20.57■□□□□ 0.88
SRRM4-204ENST00000641899 COL5A3P25940 1745 aaPredicted RBP20.56■□□□□ 0.88
SRRM4-204ENST00000641899 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
SRRM4-204ENST00000641899 USPL1Q5W0Q7 1092 aa20.56■□□□□ 0.88
SRRM4-204ENST00000641899 INTS5Q6P9B9 1019 aaKnown RBP20.56■□□□□ 0.88
SRRM4-204ENST00000641899 TTLL6Q8N841 843 aa20.56■□□□□ 0.88
SRRM4-204ENST00000641899 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
SRRM4-204ENST00000641899 SULT6B1Q6IMI4 303 aa20.55■□□□□ 0.88
SRRM4-204ENST00000641899 MORC1Q86VD1 984 aa20.55■□□□□ 0.88
SRRM4-204ENST00000641899 H0YIN7 160 aa20.54■□□□□ 0.88
SRRM4-204ENST00000641899 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
SRRM4-204ENST00000641899 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
SRRM4-204ENST00000641899 TNRC6CQ9HCJ0 1690 aaKnown RBP20.54■□□□□ 0.88
SRRM4-204ENST00000641899 BRCA1P38398 1863 aaKnown RBP20.53■□□□□ 0.88
SRRM4-204ENST00000641899 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms