RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ANKRD24Q8TF21 1146 aa21.1■□□□□ 0.97
PHGDH-229ENST00000641891 KCNQ3O43525 872 aa21.1■□□□□ 0.97
PHGDH-229ENST00000641891 TTC22Q5TAA0 569 aa21.1■□□□□ 0.97
PHGDH-229ENST00000641891 AXIN2Q9Y2T1 843 aa21.1■□□□□ 0.97
PHGDH-229ENST00000641891 PHAXQ9H814 394 aaKnown RBP21.09■□□□□ 0.97
PHGDH-229ENST00000641891 KDM3BQ7LBC6 1761 aa21.09■□□□□ 0.97
PHGDH-229ENST00000641891 CDC45O75419 566 aa21.09■□□□□ 0.97
PHGDH-229ENST00000641891 MPRIPQ6WCQ1 1025 aa21.09■□□□□ 0.97
PHGDH-229ENST00000641891 SOS1Q07889 1333 aaPredicted RBP21.09■□□□□ 0.97
PHGDH-229ENST00000641891 GNAI2P04899 355 aa21.08■□□□□ 0.97
PHGDH-229ENST00000641891 EIF4A1P60842 406 aaKnown RBP21.08■□□□□ 0.97
PHGDH-229ENST00000641891 KIF1AQ12756 1690 aa21.08■□□□□ 0.97
PHGDH-229ENST00000641891 EIF2S2P20042 333 aaKnown RBP21.07■□□□□ 0.96
PHGDH-229ENST00000641891 AKAP4Q5JQC9 854 aa21.07■□□□□ 0.96
PHGDH-229ENST00000641891 C19orf44Q9H6X5 657 aa21.07■□□□□ 0.96
PHGDH-229ENST00000641891 NCAPD2Q15021 1401 aa21.07■□□□□ 0.96
PHGDH-229ENST00000641891 HMMRO75330 724 aa21.07■□□□□ 0.96
PHGDH-229ENST00000641891 PLEKHO1Q53GL0 409 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-229ENST00000641891 DDX17Q92841 729 aaKnown RBP21.07■□□□□ 0.96
PHGDH-229ENST00000641891 CACNA1FO60840 1977 aa21.06■□□□□ 0.96
PHGDH-229ENST00000641891 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
PHGDH-229ENST00000641891 RGPD5Q99666 1765 aa21.06■□□□□ 0.96
PHGDH-229ENST00000641891 KIF2CQ99661 725 aa21.06■□□□□ 0.96
PHGDH-229ENST00000641891 EXOC6BQ9Y2D4 811 aa21.05■□□□□ 0.96
PHGDH-229ENST00000641891 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
PHGDH-229ENST00000641891 TEFQ10587 303 aa21.04■□□□□ 0.96
PHGDH-229ENST00000641891 HSCBQ8IWL3 235 aa21.04■□□□□ 0.96
PHGDH-229ENST00000641891 ALS2Q96Q42 1657 aa21.04■□□□□ 0.96
PHGDH-229ENST00000641891 CAMTA1Q9Y6Y1 1673 aa21.04■□□□□ 0.96
PHGDH-229ENST00000641891 PNMA6EA0A0J9YXQ4 647 aa21.04■□□□□ 0.96
PHGDH-229ENST00000641891 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
PHGDH-229ENST00000641891 ZC3H6P61129 1189 aaKnown RBP21.04■□□□□ 0.96
PHGDH-229ENST00000641891 PXDNLA1KZ92 1463 aa21.03■□□□□ 0.96
PHGDH-229ENST00000641891 GNAI3P08754 354 aa21.03■□□□□ 0.96
PHGDH-229ENST00000641891 CHPF2Q9P2E5 772 aa21.03■□□□□ 0.96
PHGDH-229ENST00000641891 RNMTO43148 476 aaKnown RBP21.03■□□□□ 0.96
PHGDH-229ENST00000641891 AMOTQ4VCS5 1084 aa21.03■□□□□ 0.96
PHGDH-229ENST00000641891 LRRFIP2Q9Y608 721 aaKnown RBP21.03■□□□□ 0.96
PHGDH-229ENST00000641891 TMEM94Q12767 1356 aa21.03■□□□□ 0.96
PHGDH-229ENST00000641891 MST1RQ04912 1400 aa21.02■□□□□ 0.96
PHGDH-229ENST00000641891 SDSP20132 328 aa21.02■□□□□ 0.96
PHGDH-229ENST00000641891 C1orf141Q5JVX7 400 aa21.02■□□□□ 0.96
PHGDH-229ENST00000641891 ANXA1P04083 346 aa21.02■□□□□ 0.95
PHGDH-229ENST00000641891 USP44Q9H0E7 712 aa21.02■□□□□ 0.95
PHGDH-229ENST00000641891 ATF3P18847 181 aa21■□□□□ 0.95
PHGDH-229ENST00000641891 ATP8B2P98198 1209 aa21■□□□□ 0.95
PHGDH-229ENST00000641891 RBM42Q9BTD8 480 aaKnown RBP21■□□□□ 0.95
PHGDH-229ENST00000641891 CD2BP2O95400 341 aaKnown RBP20.99■□□□□ 0.95
PHGDH-229ENST00000641891 GSE1Q14687 1217 aa20.99■□□□□ 0.95
PHGDH-229ENST00000641891 SNX21Q969T3 373 aa20.99■□□□□ 0.95
PHGDH-229ENST00000641891 ERBB3P21860 1342 aa20.99■□□□□ 0.95
PHGDH-229ENST00000641891 TSHZ3Q63HK5 1081 aa20.99■□□□□ 0.95
PHGDH-229ENST00000641891 HOXB7P09629 217 aa20.98■□□□□ 0.95
PHGDH-229ENST00000641891 UBTFL1P0CB47 393 aaPredicted RBP20.97■□□□□ 0.95
PHGDH-229ENST00000641891 PDE1AP54750 535 aa20.97■□□□□ 0.95
PHGDH-229ENST00000641891 NCOA3Q9Y6Q9 1424 aa20.96■□□□□ 0.95
PHGDH-229ENST00000641891 PRAMEF22A3QJZ6 481 aa20.96■□□□□ 0.95
PHGDH-229ENST00000641891 CABLES1Q8TDN4 633 aa20.96■□□□□ 0.95
PHGDH-229ENST00000641891 LRRCC1Q9C099 1032 aa20.96■□□□□ 0.95
PHGDH-229ENST00000641891 SRCIN1Q9C0H9 1055 aa20.96■□□□□ 0.95
PHGDH-229ENST00000641891 IBTKQ9P2D0 1353 aaPredicted RBP20.95■□□□□ 0.95
PHGDH-229ENST00000641891 PI4KAP2A4QPH2 592 aa20.95■□□□□ 0.94
PHGDH-229ENST00000641891 PI4KAP1Q8N8J0 262 aa20.95■□□□□ 0.94
PHGDH-229ENST00000641891 OVOS2A0A0G2JMS6 1433 aa20.95■□□□□ 0.94
PHGDH-229ENST00000641891 OSBPL3Q9H4L5 887 aa20.95■□□□□ 0.94
PHGDH-229ENST00000641891 CHMP5Q9NZZ3 219 aa20.95■□□□□ 0.94
PHGDH-229ENST00000641891 SALL3Q9BXA9 1300 aa20.94■□□□□ 0.94
PHGDH-229ENST00000641891 SIPA1L3O60292 1781 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-229ENST00000641891 HSPA2P54652 639 aa20.94■□□□□ 0.94
PHGDH-229ENST00000641891 ADCY9O60503 1353 aa20.94■□□□□ 0.94
PHGDH-229ENST00000641891 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
PHGDH-229ENST00000641891 PROSER3Q2NL68 480 aa20.93■□□□□ 0.94
PHGDH-229ENST00000641891 BEND3Q5T5X7 828 aa20.93■□□□□ 0.94
PHGDH-229ENST00000641891 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
PHGDH-229ENST00000641891 NLRP2Q9NX02 1062 aa20.93■□□□□ 0.94
PHGDH-229ENST00000641891 NBPF7P0C2Y1 421 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-229ENST00000641891 USP26Q9BXU7 913 aa20.93■□□□□ 0.94
PHGDH-229ENST00000641891 GIGYF1O75420 1035 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-229ENST00000641891 DCCP43146 1447 aa20.92■□□□□ 0.94
PHGDH-229ENST00000641891 DDIT3P35638 169 aa20.91■□□□□ 0.94
PHGDH-229ENST00000641891 PPP1R42Q7Z4L9 355 aa20.91■□□□□ 0.94
PHGDH-229ENST00000641891 ADAMTS7Q9UKP4 1686 aa20.91■□□□□ 0.94
PHGDH-229ENST00000641891 TUBGCP6Q96RT7 1819 aa20.91■□□□□ 0.94
PHGDH-229ENST00000641891 HEG1Q9ULI3 1381 aa20.91■□□□□ 0.94
PHGDH-229ENST00000641891 MX1P20591 662 aa20.9■□□□□ 0.94
PHGDH-229ENST00000641891 CHRNA2Q15822 529 aa20.9■□□□□ 0.94
PHGDH-229ENST00000641891 CASC1Q6TDU7 716 aa20.9■□□□□ 0.94
PHGDH-229ENST00000641891 SSH3Q8TE77 659 aa20.9■□□□□ 0.94
PHGDH-229ENST00000641891 FOXD4L1Q9NU39 408 aa20.9■□□□□ 0.94
PHGDH-229ENST00000641891 COL18A1P39060 1754 aa20.9■□□□□ 0.94
PHGDH-229ENST00000641891 RAPGEF4Q8WZA2 1011 aa20.9■□□□□ 0.94
PHGDH-229ENST00000641891 DBF4Q9UBU7 674 aaPredicted RBP20.9■□□□□ 0.94
PHGDH-229ENST00000641891 MEGF6O75095 1541 aa20.89■□□□□ 0.94
PHGDH-229ENST00000641891 CRYBG1Q9Y4K1 1723 aa20.89■□□□□ 0.94
PHGDH-229ENST00000641891 DNAJC5Q9H3Z4 198 aa20.89■□□□□ 0.94
PHGDH-229ENST00000641891 IL1RAPL2Q9NP60 686 aa20.89■□□□□ 0.94
PHGDH-229ENST00000641891 KDM6AO15550 1401 aaPredicted RBP20.89■□□□□ 0.93
PHGDH-229ENST00000641891 TNS3Q68CZ2 1445 aa20.89■□□□□ 0.93
PHGDH-229ENST00000641891 K7ELQ4 463 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-229ENST00000641891 POLA2Q14181 598 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms