RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ZNF530Q6P9A1 599 aaPredicted RBP22.89■■□□□ 1.25
PHGDH-213ENST00000641272 ATG3Q9NT62 314 aa22.89■■□□□ 1.25
PHGDH-213ENST00000641272 WWC3Q9ULE0 1092 aa22.89■■□□□ 1.25
PHGDH-213ENST00000641272 PLEKHG2Q9H7P9 1386 aa22.87■■□□□ 1.25
PHGDH-213ENST00000641272 SSFA2P28290 1259 aa22.86■■□□□ 1.25
PHGDH-213ENST00000641272 ZNF831Q5JPB2 1677 aa22.85■■□□□ 1.25
PHGDH-213ENST00000641272 HMGB2P26583 209 aaKnown RBP22.85■■□□□ 1.25
PHGDH-213ENST00000641272 RBM42Q9BTD8 480 aaKnown RBP22.85■■□□□ 1.25
PHGDH-213ENST00000641272 KNSTRNQ9Y448 316 aa22.85■■□□□ 1.25
PHGDH-213ENST00000641272 C4AP0C0L4 1744 aa22.85■■□□□ 1.25
PHGDH-213ENST00000641272 PLEKHO1Q53GL0 409 aaPredicted RBP22.84■■□□□ 1.25
PHGDH-213ENST00000641272 KIF7Q2M1P5 1343 aa22.83■■□□□ 1.25
PHGDH-213ENST00000641272 CD2APQ9Y5K6 639 aa22.83■■□□□ 1.25
PHGDH-213ENST00000641272 SCN11AQ9UI33 1791 aa22.83■■□□□ 1.24
PHGDH-213ENST00000641272 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
PHGDH-213ENST00000641272 SLC4A9Q96Q91 983 aa22.82■■□□□ 1.24
PHGDH-213ENST00000641272 VIRMAQ69YN4 1812 aaKnown RBP22.82■■□□□ 1.24
PHGDH-213ENST00000641272 TJP1Q07157 1748 aa22.82■■□□□ 1.24
PHGDH-213ENST00000641272 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
PHGDH-213ENST00000641272 HSP90AB1P08238 724 aaKnown RBP22.81■■□□□ 1.24
PHGDH-213ENST00000641272 SULT6B1Q6IMI4 303 aa22.81■■□□□ 1.24
PHGDH-213ENST00000641272 C1orf141Q5JVX7 400 aa22.8■■□□□ 1.24
PHGDH-213ENST00000641272 MYH14Q7Z406 1995 aaKnown RBP22.8■■□□□ 1.24
PHGDH-213ENST00000641272 KIAA1551Q9HCM1 1747 aa22.79■■□□□ 1.24
PHGDH-213ENST00000641272 ERVV-2B6SEH9 535 aa22.79■■□□□ 1.24
PHGDH-213ENST00000641272 GRIN3BO60391 1043 aa22.79■■□□□ 1.24
PHGDH-213ENST00000641272 CABP4P57796 275 aa22.79■■□□□ 1.24
PHGDH-213ENST00000641272 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
PHGDH-213ENST00000641272 N4BP2Q86UW6 1770 aaPredicted RBP22.78■■□□□ 1.24
PHGDH-213ENST00000641272 AMOTQ4VCS5 1084 aa22.78■■□□□ 1.24
PHGDH-213ENST00000641272 IL13P35225 146 aa22.77■■□□□ 1.24
PHGDH-213ENST00000641272 KIF13BQ9NQT8 1826 aa22.77■■□□□ 1.24
PHGDH-213ENST00000641272 ATP10DQ9P241 1426 aa22.76■■□□□ 1.23
PHGDH-213ENST00000641272 SENP3-EIF4A1A0A087X0R7 540 aa22.76■■□□□ 1.23
PHGDH-213ENST00000641272 PTCD1O75127 700 aaKnown RBP22.76■■□□□ 1.23
PHGDH-213ENST00000641272 MMP10P09238 476 aa22.76■■□□□ 1.23
PHGDH-213ENST00000641272 MTHFSP49914 203 aa22.76■■□□□ 1.23
PHGDH-213ENST00000641272 RTCBQ9Y3I0 505 aaKnown RBP22.76■■□□□ 1.23
PHGDH-213ENST00000641272 GIGYF1O75420 1035 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-213ENST00000641272 C1QTNF8P60827 252 aa22.75■■□□□ 1.23
PHGDH-213ENST00000641272 CNGB1Q14028 1251 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-213ENST00000641272 CNTNAP4Q9C0A0 1308 aa22.74■■□□□ 1.23
PHGDH-213ENST00000641272 PXDNLA1KZ92 1463 aa22.73■■□□□ 1.23
PHGDH-213ENST00000641272 HMOX1P09601 288 aa22.73■■□□□ 1.23
PHGDH-213ENST00000641272 CC2D1BQ5T0F9 858 aaKnown RBP22.73■■□□□ 1.23
PHGDH-213ENST00000641272 TRAPPC3LQ5T215 181 aa22.72■■□□□ 1.23
PHGDH-213ENST00000641272 NFATC2IPQ8NCF5 419 aa22.72■■□□□ 1.23
PHGDH-213ENST00000641272 C10orf71Q711Q0 1435 aa22.72■■□□□ 1.23
PHGDH-213ENST00000641272 MRC1P22897 1456 aa22.72■■□□□ 1.23
PHGDH-213ENST00000641272 ARHGEF1Q92888 912 aaKnown RBP22.71■■□□□ 1.23
PHGDH-213ENST00000641272 ADCY9O60503 1353 aa22.7■■□□□ 1.22
PHGDH-213ENST00000641272 ZNF526Q8TF50 670 aaPredicted RBP22.69■■□□□ 1.22
PHGDH-213ENST00000641272 RPS6KA4O75676 772 aa22.68■■□□□ 1.22
PHGDH-213ENST00000641272 GYS1P13807 737 aa22.68■■□□□ 1.22
PHGDH-213ENST00000641272 RFC4P35249 363 aa22.68■■□□□ 1.22
PHGDH-213ENST00000641272 CRKLP46109 303 aaKnown RBP22.68■■□□□ 1.22
PHGDH-213ENST00000641272 RC3H1Q5TC82 1133 aaKnown RBP22.68■■□□□ 1.22
PHGDH-213ENST00000641272 ADAMTS7Q9UKP4 1686 aa22.68■■□□□ 1.22
PHGDH-213ENST00000641272 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
PHGDH-213ENST00000641272 BRCA1P38398 1863 aaKnown RBP22.67■■□□□ 1.22
PHGDH-213ENST00000641272 ADRA2BP18089 450 aa22.67■■□□□ 1.22
PHGDH-213ENST00000641272 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
PHGDH-213ENST00000641272 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
PHGDH-213ENST00000641272 LGR6Q9HBX8 967 aa22.66■■□□□ 1.22
PHGDH-213ENST00000641272 KCPQ6ZWJ8 1503 aa22.66■■□□□ 1.22
PHGDH-213ENST00000641272 PER1O15534 1290 aaPredicted RBP22.64■■□□□ 1.21
PHGDH-213ENST00000641272 NLGN1Q8N2Q7 840 aa22.64■■□□□ 1.21
PHGDH-213ENST00000641272 SLC52A2Q9HAB3 445 aa22.64■■□□□ 1.21
PHGDH-213ENST00000641272 UBR2Q8IWV8 1755 aa22.63■■□□□ 1.21
PHGDH-213ENST00000641272 A0A0G2JLW4 131 aa22.63■■□□□ 1.21
PHGDH-213ENST00000641272 DIAPH1O60610 1272 aaKnown RBP22.63■■□□□ 1.21
PHGDH-213ENST00000641272 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
PHGDH-213ENST00000641272 DNAJC10Q8IXB1 793 aa22.63■■□□□ 1.21
PHGDH-213ENST00000641272 USP42Q9H9J4 1324 aaKnown RBP22.62■■□□□ 1.21
PHGDH-213ENST00000641272 RNMTO43148 476 aaKnown RBP22.62■■□□□ 1.21
PHGDH-213ENST00000641272 MTHFSDQ2M296 383 aaKnown RBP22.62■■□□□ 1.21
PHGDH-213ENST00000641272 GPBP1L1Q9HC44 474 aaPredicted RBP22.62■■□□□ 1.21
PHGDH-213ENST00000641272 CCDC87Q9NVE4 849 aa22.62■■□□□ 1.21
PHGDH-213ENST00000641272 BCS1LQ9Y276 419 aa22.62■■□□□ 1.21
PHGDH-213ENST00000641272 PARP3Q9Y6F1 533 aa22.62■■□□□ 1.21
PHGDH-213ENST00000641272 FKBP8Q14318 412 aa22.6■■□□□ 1.21
PHGDH-213ENST00000641272 U2SURPO15042 1029 aaKnown RBP22.59■■□□□ 1.21
PHGDH-213ENST00000641272 DPEP1P16444 411 aa22.59■■□□□ 1.21
PHGDH-213ENST00000641272 DDR1Q08345 913 aa22.59■■□□□ 1.21
PHGDH-213ENST00000641272 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
PHGDH-213ENST00000641272 ARFGEF1Q9Y6D6 1849 aa22.58■■□□□ 1.21
PHGDH-213ENST00000641272 SIPA1L3O60292 1781 aaPredicted RBP22.58■■□□□ 1.2
PHGDH-213ENST00000641272 TGFB2P61812 414 aa22.57■■□□□ 1.2
PHGDH-213ENST00000641272 AFDNP55196 1824 aaKnown RBP22.57■■□□□ 1.2
PHGDH-213ENST00000641272 COL15A1P39059 1388 aa22.56■■□□□ 1.2
PHGDH-213ENST00000641272 SOS1Q07889 1333 aaPredicted RBP22.56■■□□□ 1.2
PHGDH-213ENST00000641272 NPC1L1Q9UHC9 1359 aa22.55■■□□□ 1.2
PHGDH-213ENST00000641272 FCHSD2O94868 740 aa22.55■■□□□ 1.2
PHGDH-213ENST00000641272 ZBTB1Q9Y2K1 713 aa22.55■■□□□ 1.2
PHGDH-213ENST00000641272 USPL1Q5W0Q7 1092 aa22.54■■□□□ 1.2
PHGDH-213ENST00000641272 CYP19A1P11511 503 aaPredicted RBP22.53■■□□□ 1.2
PHGDH-213ENST00000641272 ARHGAP27Q6ZUM4 889 aa22.52■■□□□ 1.2
PHGDH-213ENST00000641272 SCN7AQ01118 1682 aa22.52■■□□□ 1.2
PHGDH-213ENST00000641272 POLRMTO00411 1230 aaKnown RBP22.51■■□□□ 1.19
PHGDH-213ENST00000641272 ZPR1O75312 459 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms