RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 AK7Q96M32 723 aa15.98■□□□□ 0.15
ERGIC3-220ENST00000640748 ASAP1Q9ULH1 1129 aa15.98■□□□□ 0.15
ERGIC3-220ENST00000640748 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-220ENST00000640748 PHF14O94880 888 aa15.97■□□□□ 0.15
ERGIC3-220ENST00000640748 PHKG2P15735 406 aa15.97■□□□□ 0.15
ERGIC3-220ENST00000640748 HMGB2P26583 209 aaKnown RBP15.97■□□□□ 0.15
ERGIC3-220ENST00000640748 ITPK1Q13572 414 aa15.97■□□□□ 0.15
ERGIC3-220ENST00000640748 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-220ENST00000640748 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
ERGIC3-220ENST00000640748 EIF4A2Q14240 407 aaKnown RBP15.96■□□□□ 0.15
ERGIC3-220ENST00000640748 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
ERGIC3-220ENST00000640748 SSFA2P28290 1259 aa15.95■□□□□ 0.14
ERGIC3-220ENST00000640748 ATG3Q9NT62 314 aa15.95■□□□□ 0.14
ERGIC3-220ENST00000640748 TMOD3Q9NYL9 352 aa15.95■□□□□ 0.14
ERGIC3-220ENST00000640748 KNSTRNQ9Y448 316 aa15.95■□□□□ 0.14
ERGIC3-220ENST00000640748 CEP350Q5VT06 3117 aa15.94■□□□□ 0.14
ERGIC3-220ENST00000640748 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
ERGIC3-220ENST00000640748 CCDC184Q52MB2 194 aa15.94■□□□□ 0.14
ERGIC3-220ENST00000640748 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
ERGIC3-220ENST00000640748 ADCY9O60503 1353 aa15.94■□□□□ 0.14
ERGIC3-220ENST00000640748 KDRP35968 1356 aa15.93■□□□□ 0.14
ERGIC3-220ENST00000640748 TNNT2P45379 298 aaPredicted RBP15.93■□□□□ 0.14
ERGIC3-220ENST00000640748 GNPATO15228 680 aa15.92■□□□□ 0.14
ERGIC3-220ENST00000640748 SLC4A9Q96Q91 983 aa15.92■□□□□ 0.14
ERGIC3-220ENST00000640748 IGSF1Q8N6C5 1336 aa15.92■□□□□ 0.14
ERGIC3-220ENST00000640748 PLEKHG2Q9H7P9 1386 aa15.91■□□□□ 0.14
ERGIC3-220ENST00000640748 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
ERGIC3-220ENST00000640748 ATP6V1AP38606 617 aa15.91■□□□□ 0.14
ERGIC3-220ENST00000640748 WWC3Q9ULE0 1092 aa15.91■□□□□ 0.14
ERGIC3-220ENST00000640748 CC2D1BQ5T0F9 858 aaKnown RBP15.9■□□□□ 0.14
ERGIC3-220ENST00000640748 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
ERGIC3-220ENST00000640748 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
ERGIC3-220ENST00000640748 FAM9BQ8IZU0 186 aa15.88■□□□□ 0.13
ERGIC3-220ENST00000640748 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
ERGIC3-220ENST00000640748 MMP10P09238 476 aa15.87■□□□□ 0.13
ERGIC3-220ENST00000640748 ZNF831Q5JPB2 1677 aa15.86■□□□□ 0.13
ERGIC3-220ENST00000640748 PXDNLA1KZ92 1463 aa15.86■□□□□ 0.13
ERGIC3-220ENST00000640748 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
ERGIC3-220ENST00000640748 DCAF5Q96JK2 942 aa15.86■□□□□ 0.13
ERGIC3-220ENST00000640748 KIAA1551Q9HCM1 1747 aa15.85■□□□□ 0.13
ERGIC3-220ENST00000640748 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
ERGIC3-220ENST00000640748 CICQ96RK0 1608 aaPredicted RBP15.85■□□□□ 0.13
ERGIC3-220ENST00000640748 HNRNPUQ00839 825 aaKnown RBP eCLIP15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 RC3H1Q5TC82 1133 aaKnown RBP15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 ZNF526Q8TF50 670 aaPredicted RBP15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 ARHGEF1Q92888 912 aaKnown RBP15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 COL5A3P25940 1745 aaPredicted RBP15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 CNTNAP4Q9C0A0 1308 aa15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
ERGIC3-220ENST00000640748 HSP90AB1P08238 724 aaKnown RBP15.83■□□□□ 0.12
ERGIC3-220ENST00000640748 PLEKHO1Q53GL0 409 aaPredicted RBP15.83■□□□□ 0.12
ERGIC3-220ENST00000640748 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.12
ERGIC3-220ENST00000640748 C10orf71Q711Q0 1435 aa15.83■□□□□ 0.12
ERGIC3-220ENST00000640748 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
ERGIC3-220ENST00000640748 GYS1P13807 737 aa15.82■□□□□ 0.12
ERGIC3-220ENST00000640748 ADRA2BP18089 450 aa15.82■□□□□ 0.12
ERGIC3-220ENST00000640748 AMOTQ4VCS5 1084 aa15.82■□□□□ 0.12
ERGIC3-220ENST00000640748 NLGN1Q8N2Q7 840 aa15.82■□□□□ 0.12
ERGIC3-220ENST00000640748 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
ERGIC3-220ENST00000640748 MYH14Q7Z406 1995 aaKnown RBP15.82■□□□□ 0.12
ERGIC3-220ENST00000640748 CABP4P57796 275 aa15.81■□□□□ 0.12
ERGIC3-220ENST00000640748 A0A0G2JLW4 131 aa15.8■□□□□ 0.12
ERGIC3-220ENST00000640748 KIF3CO14782 793 aa15.8■□□□□ 0.12
ERGIC3-220ENST00000640748 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
ERGIC3-220ENST00000640748 IL13P35225 146 aa15.8■□□□□ 0.12
ERGIC3-220ENST00000640748 MTHFSP49914 203 aa15.8■□□□□ 0.12
ERGIC3-220ENST00000640748 TGFB2P61812 414 aa15.8■□□□□ 0.12
ERGIC3-220ENST00000640748 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
ERGIC3-220ENST00000640748 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
ERGIC3-220ENST00000640748 PTCD1O75127 700 aaKnown RBP15.79■□□□□ 0.12
ERGIC3-220ENST00000640748 SULT6B1Q6IMI4 303 aa15.79■□□□□ 0.12
ERGIC3-220ENST00000640748 MORC1Q86VD1 984 aa15.79■□□□□ 0.12
ERGIC3-220ENST00000640748 NFATC2IPQ8NCF5 419 aa15.79■□□□□ 0.12
ERGIC3-220ENST00000640748 DPEP1P16444 411 aa15.78■□□□□ 0.12
ERGIC3-220ENST00000640748 RFC4P35249 363 aa15.78■□□□□ 0.12
ERGIC3-220ENST00000640748 HSPA6P17066 643 aa15.77■□□□□ 0.12
ERGIC3-220ENST00000640748 KCNA3P22001 575 aa15.77■□□□□ 0.12
ERGIC3-220ENST00000640748 CRKLP46109 303 aaKnown RBP15.77■□□□□ 0.12
ERGIC3-220ENST00000640748 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
ERGIC3-220ENST00000640748 SRP68Q9UHB9 627 aaKnown RBP15.77■□□□□ 0.12
ERGIC3-220ENST00000640748 BCS1LQ9Y276 419 aa15.77■□□□□ 0.12
ERGIC3-220ENST00000640748 TJP1Q07157 1748 aa15.77■□□□□ 0.11
ERGIC3-220ENST00000640748 INTS5Q6P9B9 1019 aaKnown RBP15.76■□□□□ 0.11
ERGIC3-220ENST00000640748 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
ERGIC3-220ENST00000640748 USP42Q9H9J4 1324 aaKnown RBP15.75■□□□□ 0.11
ERGIC3-220ENST00000640748 DDR1Q08345 913 aa15.75■□□□□ 0.11
ERGIC3-220ENST00000640748 FKBP8Q14318 412 aa15.75■□□□□ 0.11
ERGIC3-220ENST00000640748 ADAMTS7Q9UKP4 1686 aa15.75■□□□□ 0.11
ERGIC3-220ENST00000640748 BRCA1P38398 1863 aaKnown RBP15.75■□□□□ 0.11
ERGIC3-220ENST00000640748 ZBED9Q6R2W3 1325 aa15.74■□□□□ 0.11
ERGIC3-220ENST00000640748 PARP3Q9Y6F1 533 aa15.74■□□□□ 0.11
ERGIC3-220ENST00000640748 SCN11AQ9UI33 1791 aa15.73■□□□□ 0.11
ERGIC3-220ENST00000640748 ARHGAP27Q6ZUM4 889 aa15.73■□□□□ 0.11
ERGIC3-220ENST00000640748 LGR6Q9HBX8 967 aa15.73■□□□□ 0.11
ERGIC3-220ENST00000640748 GTF3C3Q9Y5Q9 886 aa15.73■□□□□ 0.11
ERGIC3-220ENST00000640748 MRC1P22897 1456 aa15.72■□□□□ 0.11
ERGIC3-220ENST00000640748 FCHSD2O94868 740 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms