RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
RTTN-221ENST00000640736 AMOTQ4VCS5 1084 aa18.72■□□□□ 0.59
RTTN-221ENST00000640736 KLHL34Q8N239 644 aa18.72■□□□□ 0.59
RTTN-221ENST00000640736 UBR3Q6ZT12 1888 aa18.71■□□□□ 0.59
RTTN-221ENST00000640736 LOC102724428A0A0B4J2F2 783 aa18.71■□□□□ 0.59
RTTN-221ENST00000640736 HMGB2P26583 209 aaKnown RBP18.71■□□□□ 0.59
RTTN-221ENST00000640736 SIK1P57059 783 aa18.71■□□□□ 0.59
RTTN-221ENST00000640736 AK7Q96M32 723 aa18.71■□□□□ 0.59
RTTN-221ENST00000640736 KDRP35968 1356 aa18.7■□□□□ 0.58
RTTN-221ENST00000640736 KDM6AO15550 1401 aaPredicted RBP18.7■□□□□ 0.58
RTTN-221ENST00000640736 C1orf141Q5JVX7 400 aa18.7■□□□□ 0.58
RTTN-221ENST00000640736 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
RTTN-221ENST00000640736 ATG3Q9NT62 314 aa18.7■□□□□ 0.58
RTTN-221ENST00000640736 ERVV-2B6SEH9 535 aa18.69■□□□□ 0.58
RTTN-221ENST00000640736 MSL1Q68DK7 614 aa18.69■□□□□ 0.58
RTTN-221ENST00000640736 PHF14O94880 888 aa18.68■□□□□ 0.58
RTTN-221ENST00000640736 ATP6V1AP38606 617 aa18.68■□□□□ 0.58
RTTN-221ENST00000640736 LINC00116Q8NCU8 138 aa18.68■□□□□ 0.58
RTTN-221ENST00000640736 SCN11AQ9UI33 1791 aa18.68■□□□□ 0.58
RTTN-221ENST00000640736 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
RTTN-221ENST00000640736 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
RTTN-221ENST00000640736 DIAPH1O60610 1272 aaKnown RBP18.67■□□□□ 0.58
RTTN-221ENST00000640736 HMOX1P09601 288 aa18.67■□□□□ 0.58
RTTN-221ENST00000640736 CABP4P57796 275 aa18.67■□□□□ 0.58
RTTN-221ENST00000640736 ITPK1Q13572 414 aa18.67■□□□□ 0.58
RTTN-221ENST00000640736 SMIM5Q71RC9 77 aa18.67■□□□□ 0.58
RTTN-221ENST00000640736 AMIGO3Q86WK7 504 aa18.67■□□□□ 0.58
RTTN-221ENST00000640736 FLAD1Q8NFF5 587 aa18.67■□□□□ 0.58
RTTN-221ENST00000640736 MAP3K5Q99683 1374 aa18.67■□□□□ 0.58
RTTN-221ENST00000640736 YY1P25490 414 aa18.66■□□□□ 0.58
RTTN-221ENST00000640736 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
RTTN-221ENST00000640736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.64■□□□□ 0.57
RTTN-221ENST00000640736 GNPATO15228 680 aa18.63■□□□□ 0.57
RTTN-221ENST00000640736 COL3A1P02461 1466 aaPredicted RBP18.63■□□□□ 0.57
RTTN-221ENST00000640736 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
RTTN-221ENST00000640736 COL5A3P25940 1745 aaPredicted RBP18.63■□□□□ 0.57
RTTN-221ENST00000640736 SSFA2P28290 1259 aa18.62■□□□□ 0.57
RTTN-221ENST00000640736 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
RTTN-221ENST00000640736 NFATC2IPQ8NCF5 419 aa18.62■□□□□ 0.57
RTTN-221ENST00000640736 SLC4A9Q96Q91 983 aa18.62■□□□□ 0.57
RTTN-221ENST00000640736 NLGN2Q8NFZ4 835 aa18.61■□□□□ 0.57
RTTN-221ENST00000640736 CHD4Q14839 1912 aa18.61■□□□□ 0.57
RTTN-221ENST00000640736 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
RTTN-221ENST00000640736 PTCD1O75127 700 aaKnown RBP18.59■□□□□ 0.57
RTTN-221ENST00000640736 GPR162Q16538 588 aa18.59■□□□□ 0.57
RTTN-221ENST00000640736 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
RTTN-221ENST00000640736 LGR6Q9HBX8 967 aa18.59■□□□□ 0.57
RTTN-221ENST00000640736 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
RTTN-221ENST00000640736 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
RTTN-221ENST00000640736 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
RTTN-221ENST00000640736 SLC52A2Q9HAB3 445 aa18.57■□□□□ 0.56
RTTN-221ENST00000640736 TJP1Q07157 1748 aa18.57■□□□□ 0.56
RTTN-221ENST00000640736 RTCBQ9Y3I0 505 aaKnown RBP18.56■□□□□ 0.56
RTTN-221ENST00000640736 MRC1P22897 1456 aa18.55■□□□□ 0.56
RTTN-221ENST00000640736 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
RTTN-221ENST00000640736 CNTNAP4Q9C0A0 1308 aa18.54■□□□□ 0.56
RTTN-221ENST00000640736 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
RTTN-221ENST00000640736 TRAPPC3LQ5T215 181 aa18.54■□□□□ 0.56
RTTN-221ENST00000640736 RC3H1Q5TC82 1133 aaKnown RBP18.54■□□□□ 0.56
RTTN-221ENST00000640736 UTRNP46939 3433 aa18.54■□□□□ 0.56
RTTN-221ENST00000640736 C4AP0C0L4 1744 aa18.53■□□□□ 0.56
RTTN-221ENST00000640736 PPP2R1AP30153 589 aa18.53■□□□□ 0.56
RTTN-221ENST00000640736 SLC39A6Q13433 755 aa18.53■□□□□ 0.56
RTTN-221ENST00000640736 CICQ96RK0 1608 aaPredicted RBP18.52■□□□□ 0.56
RTTN-221ENST00000640736 CD2APQ9Y5K6 639 aa18.52■□□□□ 0.56
RTTN-221ENST00000640736 RPS6KA4O75676 772 aa18.51■□□□□ 0.55
RTTN-221ENST00000640736 CRKLP46109 303 aaKnown RBP18.51■□□□□ 0.55
RTTN-221ENST00000640736 ARHGEF1Q92888 912 aaKnown RBP18.51■□□□□ 0.55
RTTN-221ENST00000640736 MMP10P09238 476 aa18.5■□□□□ 0.55
RTTN-221ENST00000640736 RFC4P35249 363 aa18.5■□□□□ 0.55
RTTN-221ENST00000640736 GAS2L2Q8NHY3 880 aa18.5■□□□□ 0.55
RTTN-221ENST00000640736 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
RTTN-221ENST00000640736 YBX3P16989 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
RTTN-221ENST00000640736 PRKAR2BP31323 418 aa18.49■□□□□ 0.55
RTTN-221ENST00000640736 DNAJC10Q8IXB1 793 aa18.49■□□□□ 0.55
RTTN-221ENST00000640736 GOLGB1Q14789 3259 aaKnown RBP18.49■□□□□ 0.55
RTTN-221ENST00000640736 KCPQ6ZWJ8 1503 aa18.49■□□□□ 0.55
RTTN-221ENST00000640736 GNAT3A8MTJ3 354 aa18.48■□□□□ 0.55
RTTN-221ENST00000640736 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
RTTN-221ENST00000640736 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
RTTN-221ENST00000640736 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
RTTN-221ENST00000640736 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
RTTN-221ENST00000640736 PHACTR3Q96KR7 559 aa18.47■□□□□ 0.55
RTTN-221ENST00000640736 WWC3Q9ULE0 1092 aa18.47■□□□□ 0.55
RTTN-221ENST00000640736 SIPA1L3O60292 1781 aaPredicted RBP18.47■□□□□ 0.55
RTTN-221ENST00000640736 GYS1P13807 737 aa18.46■□□□□ 0.55
RTTN-221ENST00000640736 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
RTTN-221ENST00000640736 TEFQ10587 303 aa18.45■□□□□ 0.54
RTTN-221ENST00000640736 INTS5Q6P9B9 1019 aaKnown RBP18.45■□□□□ 0.54
RTTN-221ENST00000640736 TTC5Q8N0Z6 440 aa18.45■□□□□ 0.54
RTTN-221ENST00000640736 ZNF784Q8NCA9 323 aaPredicted RBP18.45■□□□□ 0.54
RTTN-221ENST00000640736 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
RTTN-221ENST00000640736 CCDC87Q9NVE4 849 aa18.45■□□□□ 0.54
RTTN-221ENST00000640736 SRP68Q9UHB9 627 aaKnown RBP18.45■□□□□ 0.54
RTTN-221ENST00000640736 KIF13BQ9NQT8 1826 aa18.44■□□□□ 0.54
RTTN-221ENST00000640736 GRIN3BO60391 1043 aa18.44■□□□□ 0.54
RTTN-221ENST00000640736 N4BP2Q86UW6 1770 aaPredicted RBP18.44■□□□□ 0.54
RTTN-221ENST00000640736 CYP19A1P11511 503 aaPredicted RBP18.43■□□□□ 0.54
RTTN-221ENST00000640736 USP42Q9H9J4 1324 aaKnown RBP18.43■□□□□ 0.54
RTTN-221ENST00000640736 PARP3Q9Y6F1 533 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms