RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 RBM42Q9BTD8 480 aaKnown RBP19.88■□□□□ 0.77
GFAP-236ENST00000640545 GNPATO15228 680 aa19.87■□□□□ 0.77
GFAP-236ENST00000640545 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
GFAP-236ENST00000640545 LINC00116Q8NCU8 138 aa19.87■□□□□ 0.77
GFAP-236ENST00000640545 DIAPH1O60610 1272 aaKnown RBP19.86■□□□□ 0.77
GFAP-236ENST00000640545 KDRP35968 1356 aa19.85■□□□□ 0.77
GFAP-236ENST00000640545 CNGB1Q14028 1251 aaPredicted RBP19.85■□□□□ 0.77
GFAP-236ENST00000640545 C4BP0C0L5 1744 aa19.85■□□□□ 0.77
GFAP-236ENST00000640545 TUBGCP6Q96RT7 1819 aa19.84■□□□□ 0.77
GFAP-236ENST00000640545 ITPK1Q13572 414 aa19.84■□□□□ 0.77
GFAP-236ENST00000640545 AKAP4Q5JQC9 854 aa19.84■□□□□ 0.77
GFAP-236ENST00000640545 RTCBQ9Y3I0 505 aaKnown RBP19.84■□□□□ 0.77
GFAP-236ENST00000640545 CD2APQ9Y5K6 639 aa19.84■□□□□ 0.77
GFAP-236ENST00000640545 NPC1L1Q9UHC9 1359 aa19.83■□□□□ 0.77
GFAP-236ENST00000640545 TRAPPC3LQ5T215 181 aa19.83■□□□□ 0.77
GFAP-236ENST00000640545 NFATC2IPQ8NCF5 419 aa19.83■□□□□ 0.77
GFAP-236ENST00000640545 HMOX1P09601 288 aa19.82■□□□□ 0.76
GFAP-236ENST00000640545 NLGN2Q8NFZ4 835 aa19.82■□□□□ 0.76
GFAP-236ENST00000640545 TAF1LQ8IZX4 1826 aa19.81■□□□□ 0.76
GFAP-236ENST00000640545 GRIN3BO60391 1043 aa19.81■□□□□ 0.76
GFAP-236ENST00000640545 RC3H1Q5TC82 1133 aaKnown RBP19.81■□□□□ 0.76
GFAP-236ENST00000640545 COL24A1Q17RW2 1714 aa19.8■□□□□ 0.76
GFAP-236ENST00000640545 KDM6AO15550 1401 aaPredicted RBP19.8■□□□□ 0.76
GFAP-236ENST00000640545 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
GFAP-236ENST00000640545 ADRA2BP18089 450 aa19.8■□□□□ 0.76
GFAP-236ENST00000640545 SMIM5Q71RC9 77 aa19.79■□□□□ 0.76
GFAP-236ENST00000640545 AMIGO3Q86WK7 504 aa19.79■□□□□ 0.76
GFAP-236ENST00000640545 CFAP53Q96M91 514 aa19.79■□□□□ 0.76
GFAP-236ENST00000640545 U2SURPO15042 1029 aaKnown RBP19.78■□□□□ 0.76
GFAP-236ENST00000640545 RFC4P35249 363 aa19.78■□□□□ 0.76
GFAP-236ENST00000640545 NLGN1Q8N2Q7 840 aa19.78■□□□□ 0.76
GFAP-236ENST00000640545 CNTNAP4Q9C0A0 1308 aa19.77■□□□□ 0.76
GFAP-236ENST00000640545 SLC4A9Q96Q91 983 aa19.77■□□□□ 0.76
GFAP-236ENST00000640545 RPS6KA4O75676 772 aa19.76■□□□□ 0.75
GFAP-236ENST00000640545 ZNF784Q8NCA9 323 aaPredicted RBP19.76■□□□□ 0.75
GFAP-236ENST00000640545 SLC52A2Q9HAB3 445 aa19.76■□□□□ 0.75
GFAP-236ENST00000640545 UTRNP46939 3433 aa19.76■□□□□ 0.75
GFAP-236ENST00000640545 UBR3Q6ZT12 1888 aa19.74■□□□□ 0.75
GFAP-236ENST00000640545 RNMTO43148 476 aaKnown RBP19.74■□□□□ 0.75
GFAP-236ENST00000640545 MTHFSDQ2M296 383 aaKnown RBP19.74■□□□□ 0.75
GFAP-236ENST00000640545 ARHGEF1Q92888 912 aaKnown RBP19.74■□□□□ 0.75
GFAP-236ENST00000640545 LGR6Q9HBX8 967 aa19.74■□□□□ 0.75
GFAP-236ENST00000640545 NUDCQ9Y266 331 aa19.74■□□□□ 0.75
GFAP-236ENST00000640545 MMP10P09238 476 aa19.73■□□□□ 0.75
GFAP-236ENST00000640545 GAS2L2Q8NHY3 880 aa19.73■□□□□ 0.75
GFAP-236ENST00000640545 CRKLP46109 303 aaKnown RBP19.72■□□□□ 0.75
GFAP-236ENST00000640545 YBX3P16989 372 aaKnown RBP eCLIP19.71■□□□□ 0.75
GFAP-236ENST00000640545 ZNF831Q5JPB2 1677 aa19.71■□□□□ 0.75
GFAP-236ENST00000640545 PARP3Q9Y6F1 533 aa19.7■□□□□ 0.74
GFAP-236ENST00000640545 CHD4Q14839 1912 aa19.69■□□□□ 0.74
GFAP-236ENST00000640545 TEFQ10587 303 aa19.69■□□□□ 0.74
GFAP-236ENST00000640545 TTC5Q8N0Z6 440 aa19.69■□□□□ 0.74
GFAP-236ENST00000640545 CCDC87Q9NVE4 849 aa19.69■□□□□ 0.74
GFAP-236ENST00000640545 GNAT3A8MTJ3 354 aa19.68■□□□□ 0.74
GFAP-236ENST00000640545 SLC39A6Q13433 755 aa19.68■□□□□ 0.74
GFAP-236ENST00000640545 GOLGB1Q14789 3259 aaKnown RBP19.68■□□□□ 0.74
GFAP-236ENST00000640545 GYS1P13807 737 aa19.67■□□□□ 0.74
GFAP-236ENST00000640545 SCN11AQ9UI33 1791 aa19.66■□□□□ 0.74
GFAP-236ENST00000640545 ZPR1O75312 459 aa19.66■□□□□ 0.74
GFAP-236ENST00000640545 TGFB2P61812 414 aa19.66■□□□□ 0.74
GFAP-236ENST00000640545 DNAJC10Q8IXB1 793 aa19.66■□□□□ 0.74
GFAP-236ENST00000640545 VSIG10Q8N0Z9 540 aa19.66■□□□□ 0.74
GFAP-236ENST00000640545 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
GFAP-236ENST00000640545 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.74
GFAP-236ENST00000640545 STARD3NLO95772 234 aa19.64■□□□□ 0.73
GFAP-236ENST00000640545 PPP2R1AP30153 589 aa19.64■□□□□ 0.73
GFAP-236ENST00000640545 INTS5Q6P9B9 1019 aaKnown RBP19.64■□□□□ 0.73
GFAP-236ENST00000640545 COL3A1P02461 1466 aaPredicted RBP19.64■□□□□ 0.73
GFAP-236ENST00000640545 USP42Q9H9J4 1324 aaKnown RBP19.63■□□□□ 0.73
GFAP-236ENST00000640545 CYP19A1P11511 503 aaPredicted RBP19.63■□□□□ 0.73
GFAP-236ENST00000640545 PRKAR2BP31323 418 aa19.63■□□□□ 0.73
GFAP-236ENST00000640545 TEX13AQ9BXU3 409 aaPredicted RBP19.63■□□□□ 0.73
GFAP-236ENST00000640545 COL5A3P25940 1745 aaPredicted RBP19.62■□□□□ 0.73
GFAP-236ENST00000640545 MRC1P22897 1456 aa19.62■□□□□ 0.73
GFAP-236ENST00000640545 NEFMP07197 916 aa19.62■□□□□ 0.73
GFAP-236ENST00000640545 RTF1Q92541 710 aaKnown RBP19.62■□□□□ 0.73
GFAP-236ENST00000640545 WWC3Q9ULE0 1092 aa19.62■□□□□ 0.73
GFAP-236ENST00000640545 FCHSD2O94868 740 aa19.61■□□□□ 0.73
GFAP-236ENST00000640545 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
GFAP-236ENST00000640545 IL17REQ8NFR9 667 aa19.61■□□□□ 0.73
GFAP-236ENST00000640545 RSPH6AQ9H0K4 717 aa19.61■□□□□ 0.73
GFAP-236ENST00000640545 SRP68Q9UHB9 627 aaKnown RBP19.61■□□□□ 0.73
GFAP-236ENST00000640545 FKBP8Q14318 412 aa19.6■□□□□ 0.73
GFAP-236ENST00000640545 ZNF790Q6PG37 636 aa19.6■□□□□ 0.73
GFAP-236ENST00000640545 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
GFAP-236ENST00000640545 A0A0G2JLW4 131 aa19.59■□□□□ 0.73
GFAP-236ENST00000640545 GIGYF1O75420 1035 aaPredicted RBP19.59■□□□□ 0.73
GFAP-236ENST00000640545 CICQ96RK0 1608 aaPredicted RBP19.58■□□□□ 0.73
GFAP-236ENST00000640545 USPL1Q5W0Q7 1092 aa19.58■□□□□ 0.72
GFAP-236ENST00000640545 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.72
GFAP-236ENST00000640545 FMNL2Q96PY5 1086 aa19.58■□□□□ 0.72
GFAP-236ENST00000640545 BCS1LQ9Y276 419 aa19.58■□□□□ 0.72
GFAP-236ENST00000640545 MYH14Q7Z406 1995 aaKnown RBP19.57■□□□□ 0.72
GFAP-236ENST00000640545 A0A087WZG4 1122 aa19.57■□□□□ 0.72
GFAP-236ENST00000640545 BTBD11A6QL63 1104 aa19.57■□□□□ 0.72
GFAP-236ENST00000640545 CANXP27824 592 aaKnown RBP19.57■□□□□ 0.72
GFAP-236ENST00000640545 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
GFAP-236ENST00000640545 ZBTB1Q9Y2K1 713 aa19.57■□□□□ 0.72
GFAP-236ENST00000640545 DPEP1P16444 411 aa19.56■□□□□ 0.72
GFAP-236ENST00000640545 C1QTNF8P60827 252 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms