RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 KLHL34Q8N239 644 aa19.5■□□□□ 0.71
HNRNPU-229ENST00000640440 LINC00116Q8NCU8 138 aa19.5■□□□□ 0.71
HNRNPU-229ENST00000640440 CHD4Q14839 1912 aa19.5■□□□□ 0.71
HNRNPU-229ENST00000640440 UTRNP46939 3433 aa19.5■□□□□ 0.71
HNRNPU-229ENST00000640440 COL3A1P02461 1466 aaPredicted RBP19.49■□□□□ 0.71
HNRNPU-229ENST00000640440 MAP3K5Q99683 1374 aa19.49■□□□□ 0.71
HNRNPU-229ENST00000640440 COL5A3P25940 1745 aaPredicted RBP19.49■□□□□ 0.71
HNRNPU-229ENST00000640440 HMOX1P09601 288 aa19.49■□□□□ 0.71
HNRNPU-229ENST00000640440 MSL1Q68DK7 614 aa19.49■□□□□ 0.71
HNRNPU-229ENST00000640440 ZNF831Q5JPB2 1677 aa19.49■□□□□ 0.71
HNRNPU-229ENST00000640440 DIAPH1O60610 1272 aaKnown RBP19.48■□□□□ 0.71
HNRNPU-229ENST00000640440 ATP6V1AP38606 617 aa19.48■□□□□ 0.71
HNRNPU-229ENST00000640440 CABP4P57796 275 aa19.48■□□□□ 0.71
HNRNPU-229ENST00000640440 ITPK1Q13572 414 aa19.48■□□□□ 0.71
HNRNPU-229ENST00000640440 AMIGO3Q86WK7 504 aa19.48■□□□□ 0.71
HNRNPU-229ENST00000640440 FLAD1Q8NFF5 587 aa19.48■□□□□ 0.71
HNRNPU-229ENST00000640440 MYH14Q7Z406 1995 aaKnown RBP19.48■□□□□ 0.71
HNRNPU-229ENST00000640440 PHF14O94880 888 aa19.47■□□□□ 0.71
HNRNPU-229ENST00000640440 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
HNRNPU-229ENST00000640440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.45■□□□□ 0.7
HNRNPU-229ENST00000640440 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
HNRNPU-229ENST00000640440 GNPATO15228 680 aa19.44■□□□□ 0.7
HNRNPU-229ENST00000640440 GOLGB1Q14789 3259 aaKnown RBP19.43■□□□□ 0.7
HNRNPU-229ENST00000640440 YY1P25490 414 aa19.43■□□□□ 0.7
HNRNPU-229ENST00000640440 AKAP4Q5JQC9 854 aa19.43■□□□□ 0.7
HNRNPU-229ENST00000640440 SLC4A9Q96Q91 983 aa19.43■□□□□ 0.7
HNRNPU-229ENST00000640440 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
HNRNPU-229ENST00000640440 SSFA2P28290 1259 aa19.42■□□□□ 0.7
HNRNPU-229ENST00000640440 NFATC2IPQ8NCF5 419 aa19.42■□□□□ 0.7
HNRNPU-229ENST00000640440 TJP1Q07157 1748 aa19.42■□□□□ 0.7
HNRNPU-229ENST00000640440 ADAMTS7Q9UKP4 1686 aa19.41■□□□□ 0.7
HNRNPU-229ENST00000640440 MRC1P22897 1456 aa19.41■□□□□ 0.7
HNRNPU-229ENST00000640440 C4AP0C0L4 1744 aa19.4■□□□□ 0.7
HNRNPU-229ENST00000640440 MTHFSDQ2M296 383 aaKnown RBP19.4■□□□□ 0.7
HNRNPU-229ENST00000640440 NLGN2Q8NFZ4 835 aa19.4■□□□□ 0.7
HNRNPU-229ENST00000640440 PTCD1O75127 700 aaKnown RBP19.39■□□□□ 0.69
HNRNPU-229ENST00000640440 LGR6Q9HBX8 967 aa19.39■□□□□ 0.69
HNRNPU-229ENST00000640440 CICQ96RK0 1608 aaPredicted RBP19.39■□□□□ 0.69
HNRNPU-229ENST00000640440 RNMTO43148 476 aaKnown RBP19.38■□□□□ 0.69
HNRNPU-229ENST00000640440 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
HNRNPU-229ENST00000640440 CNTNAP4Q9C0A0 1308 aa19.37■□□□□ 0.69
HNRNPU-229ENST00000640440 GPR162Q16538 588 aa19.37■□□□□ 0.69
HNRNPU-229ENST00000640440 SLC52A2Q9HAB3 445 aa19.37■□□□□ 0.69
HNRNPU-229ENST00000640440 RTCBQ9Y3I0 505 aaKnown RBP19.37■□□□□ 0.69
HNRNPU-229ENST00000640440 PPP2R1AP30153 589 aa19.36■□□□□ 0.69
HNRNPU-229ENST00000640440 PELP1Q8IZL8 1130 aaKnown RBP19.36■□□□□ 0.69
HNRNPU-229ENST00000640440 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
HNRNPU-229ENST00000640440 UBR2Q8IWV8 1755 aa19.35■□□□□ 0.69
HNRNPU-229ENST00000640440 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
HNRNPU-229ENST00000640440 TRAPPC3LQ5T215 181 aa19.34■□□□□ 0.69
HNRNPU-229ENST00000640440 SLC39A6Q13433 755 aa19.33■□□□□ 0.68
HNRNPU-229ENST00000640440 KCPQ6ZWJ8 1503 aa19.33■□□□□ 0.68
HNRNPU-229ENST00000640440 RPS6KA4O75676 772 aa19.32■□□□□ 0.68
HNRNPU-229ENST00000640440 ADRA2BP18089 450 aa19.32■□□□□ 0.68
HNRNPU-229ENST00000640440 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
HNRNPU-229ENST00000640440 GAS2L2Q8NHY3 880 aa19.32■□□□□ 0.68
HNRNPU-229ENST00000640440 CD2APQ9Y5K6 639 aa19.32■□□□□ 0.68
HNRNPU-229ENST00000640440 KIF13BQ9NQT8 1826 aa19.31■□□□□ 0.68
HNRNPU-229ENST00000640440 PRKAR2BP31323 418 aa19.31■□□□□ 0.68
HNRNPU-229ENST00000640440 ARHGEF1Q92888 912 aaKnown RBP19.31■□□□□ 0.68
HNRNPU-229ENST00000640440 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
HNRNPU-229ENST00000640440 DNAJC10Q8IXB1 793 aa19.3■□□□□ 0.68
HNRNPU-229ENST00000640440 RSPH6AQ9H0K4 717 aa19.3■□□□□ 0.68
HNRNPU-229ENST00000640440 GNAT3A8MTJ3 354 aa19.29■□□□□ 0.68
HNRNPU-229ENST00000640440 MMP10P09238 476 aa19.29■□□□□ 0.68
HNRNPU-229ENST00000640440 U2AF1L5P0DN76 240 aaPredicted RBP19.29■□□□□ 0.68
HNRNPU-229ENST00000640440 RFC4P35249 363 aa19.29■□□□□ 0.68
HNRNPU-229ENST00000640440 U2AF1Q01081 240 aaKnown RBP eCLIP19.29■□□□□ 0.682e-8■■■□□ 17.8
HNRNPU-229ENST00000640440 PHACTR3Q96KR7 559 aa19.29■□□□□ 0.68
HNRNPU-229ENST00000640440 YBX3P16989 372 aaKnown RBP eCLIP19.28■□□□□ 0.68
HNRNPU-229ENST00000640440 N4BP2Q86UW6 1770 aaPredicted RBP19.28■□□□□ 0.68
HNRNPU-229ENST00000640440 DLG5Q8TDM6 1919 aa19.27■□□□□ 0.68
HNRNPU-229ENST00000640440 IL17REQ8NFR9 667 aa19.27■□□□□ 0.68
HNRNPU-229ENST00000640440 GYS1P13807 737 aa19.26■□□□□ 0.67
HNRNPU-229ENST00000640440 TEFQ10587 303 aa19.26■□□□□ 0.67
HNRNPU-229ENST00000640440 INTS5Q6P9B9 1019 aaKnown RBP19.26■□□□□ 0.67
HNRNPU-229ENST00000640440 NLGN1Q8N2Q7 840 aa19.26■□□□□ 0.67
HNRNPU-229ENST00000640440 CCDC87Q9NVE4 849 aa19.26■□□□□ 0.67
HNRNPU-229ENST00000640440 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
HNRNPU-229ENST00000640440 TTC5Q8N0Z6 440 aa19.25■□□□□ 0.67
HNRNPU-229ENST00000640440 SRP68Q9UHB9 627 aaKnown RBP19.25■□□□□ 0.67
HNRNPU-229ENST00000640440 WWC3Q9ULE0 1092 aa19.24■□□□□ 0.67
HNRNPU-229ENST00000640440 USP42Q9H9J4 1324 aaKnown RBP19.24■□□□□ 0.67
HNRNPU-229ENST00000640440 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
HNRNPU-229ENST00000640440 CYP19A1P11511 503 aaPredicted RBP19.23■□□□□ 0.67
HNRNPU-229ENST00000640440 ZNF784Q8NCA9 323 aaPredicted RBP19.23■□□□□ 0.67
HNRNPU-229ENST00000640440 SOS1Q07889 1333 aaPredicted RBP19.23■□□□□ 0.67
HNRNPU-229ENST00000640440 GRIN3BO60391 1043 aa19.22■□□□□ 0.67
HNRNPU-229ENST00000640440 FCHSD2O94868 740 aa19.22■□□□□ 0.67
HNRNPU-229ENST00000640440 VSIG10Q8N0Z9 540 aa19.22■□□□□ 0.67
HNRNPU-229ENST00000640440 ZBTB1Q9Y2K1 713 aa19.22■□□□□ 0.67
HNRNPU-229ENST00000640440 C10orf71Q711Q0 1435 aa19.22■□□□□ 0.67
HNRNPU-229ENST00000640440 BRCA1P38398 1863 aaKnown RBP19.22■□□□□ 0.67
HNRNPU-229ENST00000640440 AFDNP55196 1824 aaKnown RBP19.21■□□□□ 0.67
HNRNPU-229ENST00000640440 ZNF790Q6PG37 636 aa19.21■□□□□ 0.67
HNRNPU-229ENST00000640440 ZNF496Q96IT1 587 aaPredicted RBP19.21■□□□□ 0.67
HNRNPU-229ENST00000640440 PARP3Q9Y6F1 533 aa19.21■□□□□ 0.67
HNRNPU-229ENST00000640440 COL15A1P39059 1388 aa19.2■□□□□ 0.66
HNRNPU-229ENST00000640440 FKBP8Q14318 412 aa19.2■□□□□ 0.66
HNRNPU-229ENST00000640440 PXDNLA1KZ92 1463 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms