RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 USP47Q96K76 1375 aa8.86□□□□□ -0.99
PRKCH-228ENST00000640011 QSER1Q2KHR3 1735 aa8.85□□□□□ -0.99
PRKCH-228ENST00000640011 YBX3P16989 372 aaKnown RBP eCLIP8.85□□□□□ -0.99
PRKCH-228ENST00000640011 IP6K1Q92551 441 aa8.85□□□□□ -0.99
PRKCH-228ENST00000640011 CCNL1Q9UK58 526 aaPredicted RBP8.85□□□□□ -0.99
PRKCH-228ENST00000640011 ATP10DQ9P241 1426 aa8.85□□□□□ -0.99
PRKCH-228ENST00000640011 SHANK3Q9BYB0 1731 aa8.85□□□□□ -0.99
PRKCH-228ENST00000640011 SBNO2Q9Y2G9 1366 aa8.85□□□□□ -0.99
PRKCH-228ENST00000640011 BTAF1O14981 1849 aa8.84□□□□□ -0.99
PRKCH-228ENST00000640011 CGNL1Q0VF96 1302 aa8.84□□□□□ -0.99
PRKCH-228ENST00000640011 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
PRKCH-228ENST00000640011 COL24A1Q17RW2 1714 aa8.84□□□□□ -0.99
PRKCH-228ENST00000640011 TERF2IPQ9NYB0 399 aa8.84□□□□□ -0.99
PRKCH-228ENST00000640011 EDC4Q6P2E9 1401 aaKnown RBP8.83□□□□□ -1
PRKCH-228ENST00000640011 ZCRB1Q8TBF4 217 aaKnown RBP8.83□□□□□ -1
PRKCH-228ENST00000640011 PUS7Q96PZ0 661 aaKnown RBP8.83□□□□□ -1
PRKCH-228ENST00000640011 NSD3Q9BZ95 1437 aa8.82□□□□□ -1
PRKCH-228ENST00000640011 RGPD5Q99666 1765 aa8.82□□□□□ -1
PRKCH-228ENST00000640011 NME9Q86XW9 330 aa8.82□□□□□ -1
PRKCH-228ENST00000640011 COL23A1Q86Y22 540 aaPredicted RBP8.82□□□□□ -1
PRKCH-228ENST00000640011 TMC1Q8TDI8 760 aa8.82□□□□□ -1
PRKCH-228ENST00000640011 L3MBTL2Q969R5 705 aa8.82□□□□□ -1
PRKCH-228ENST00000640011 ADCY9O60503 1353 aa8.82□□□□□ -1
PRKCH-228ENST00000640011 USP54Q70EL1 1684 aa8.81□□□□□ -1
PRKCH-228ENST00000640011 APLP1P51693 650 aa8.81□□□□□ -1
PRKCH-228ENST00000640011 AMPHP49418 695 aa8.8□□□□□ -1
PRKCH-228ENST00000640011 KCNQ4P56696 695 aa8.8□□□□□ -1
PRKCH-228ENST00000640011 COG3Q96JB2 828 aa8.8□□□□□ -1
PRKCH-228ENST00000640011 TRIM35Q9UPQ4 493 aa8.8□□□□□ -1
PRKCH-228ENST00000640011 NSD2O96028 1365 aa8.8□□□□□ -1
PRKCH-228ENST00000640011 FAM208AQ9UK61 1670 aaKnown RBP8.8□□□□□ -1
PRKCH-228ENST00000640011 MON2Q7Z3U7 1717 aa8.8□□□□□ -1
PRKCH-228ENST00000640011 HOXC9P31274 260 aa8.79□□□□□ -1
PRKCH-228ENST00000640011 GOLGA2Q08379 1002 aa8.79□□□□□ -1
PRKCH-228ENST00000640011 MKRN3Q13064 507 aaKnown RBP8.79□□□□□ -1
PRKCH-228ENST00000640011 RAPGEF4Q8WZA2 1011 aa8.79□□□□□ -1
PRKCH-228ENST00000640011 SMARCC1Q92922 1105 aaPredicted RBP8.79□□□□□ -1
PRKCH-228ENST00000640011 LTV1Q96GA3 475 aaPredicted RBP8.79□□□□□ -1
PRKCH-228ENST00000640011 SMG6Q86US8 1419 aaKnown RBP8.79□□□□□ -1
PRKCH-228ENST00000640011 CD163L1Q9NR16 1453 aa8.78□□□□□ -1
PRKCH-228ENST00000640011 RTL1A6NKG5 1358 aa8.78□□□□□ -1
PRKCH-228ENST00000640011 ATN1P54259 1190 aaPredicted RBP8.78□□□□□ -1
PRKCH-228ENST00000640011 MSL1Q68DK7 614 aa8.78□□□□□ -1
PRKCH-228ENST00000640011 ZNF526Q8TF50 670 aaPredicted RBP8.78□□□□□ -1
PRKCH-228ENST00000640011 AK7Q96M32 723 aa8.78□□□□□ -1
PRKCH-228ENST00000640011 IGSF1Q8N6C5 1336 aa8.78□□□□□ -1
PRKCH-228ENST00000640011 PCDH11XQ9BZA7 1347 aa8.78□□□□□ -1
PRKCH-228ENST00000640011 PCDH11YQ9BZA8 1340 aa8.78□□□□□ -1
PRKCH-228ENST00000640011 LY75O60449 1722 aa8.77□□□□□ -1
PRKCH-228ENST00000640011 A0A1W2PP64 1363 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 PALLDQ8WX93 1383 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 LTN1O94822 1766 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 TOMM70O94826 608 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 TATP17735 454 aaPredicted RBP8.77□□□□□ -1.01
PRKCH-228ENST00000640011 SSFA2P28290 1259 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 POTEHQ6S545 545 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 CARD11Q9BXL7 1154 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 SLC12A5Q9H2X9 1139 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 MAP3K19Q56UN5 1328 aa8.77□□□□□ -1.01
PRKCH-228ENST00000640011 KIF3CO14782 793 aa8.76□□□□□ -1.01
PRKCH-228ENST00000640011 ATMINO43313 823 aaPredicted RBP8.76□□□□□ -1.01
PRKCH-228ENST00000640011 CLCN6P51797 869 aa8.76□□□□□ -1.01
PRKCH-228ENST00000640011 KAT6BQ8WYB5 2073 aa8.76□□□□□ -1.01
PRKCH-228ENST00000640011 GABBR2O75899 941 aa8.75□□□□□ -1.01
PRKCH-228ENST00000640011 TGFB2P61812 414 aa8.75□□□□□ -1.01
PRKCH-228ENST00000640011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
PRKCH-228ENST00000640011 MEGF6O75095 1541 aa8.75□□□□□ -1.01
PRKCH-228ENST00000640011 KIF24Q5T7B8 1368 aa8.74□□□□□ -1.01
PRKCH-228ENST00000640011 DOT1LQ8TEK3 1739 aa8.74□□□□□ -1.01
PRKCH-228ENST00000640011 PRKCSHP14314 528 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-228ENST00000640011 NBPF6Q5VWK0 638 aa8.74□□□□□ -1.01
PRKCH-228ENST00000640011 ASTLQ6HA08 431 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-228ENST00000640011 DPY19L2Q6NUT2 758 aa8.74□□□□□ -1.01
PRKCH-228ENST00000640011 MPRIPQ6WCQ1 1025 aa8.74□□□□□ -1.01
PRKCH-228ENST00000640011 NBPF4Q96M43 638 aa8.74□□□□□ -1.01
PRKCH-228ENST00000640011 TUBGCP6Q96RT7 1819 aa8.74□□□□□ -1.01
PRKCH-228ENST00000640011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.73□□□□□ -1.01
PRKCH-228ENST00000640011 C16orf71Q8IYS4 520 aaPredicted RBP8.73□□□□□ -1.01
PRKCH-228ENST00000640011 DNAJC5GQ8N7S2 189 aa8.73□□□□□ -1.01
PRKCH-228ENST00000640011 RBM46Q8TBY0 533 aaKnown RBP8.73□□□□□ -1.01
PRKCH-228ENST00000640011 C5P01031 1676 aa8.72□□□□□ -1.01
PRKCH-228ENST00000640011 PHF14O94880 888 aa8.72□□□□□ -1.01
PRKCH-228ENST00000640011 FSTL1Q12841 308 aa8.72□□□□□ -1.01
PRKCH-228ENST00000640011 NEUROD1Q13562 356 aa8.72□□□□□ -1.01
PRKCH-228ENST00000640011 NLGN1Q8N2Q7 840 aa8.72□□□□□ -1.01
PRKCH-228ENST00000640011 INSRP06213 1382 aa8.72□□□□□ -1.01
PRKCH-228ENST00000640011 PLEKHG2Q9H7P9 1386 aa8.72□□□□□ -1.01
PRKCH-228ENST00000640011 LOC102724428A0A0B4J2F2 783 aa8.71□□□□□ -1.02
PRKCH-228ENST00000640011 SIK1P57059 783 aa8.71□□□□□ -1.02
PRKCH-228ENST00000640011 KCNV2Q8TDN2 545 aa8.71□□□□□ -1.02
PRKCH-228ENST00000640011 SIN3AQ96ST3 1273 aa8.71□□□□□ -1.02
PRKCH-228ENST00000640011 SPG7Q9UQ90 795 aa8.71□□□□□ -1.02
PRKCH-228ENST00000640011 CICQ96RK0 1608 aaPredicted RBP8.71□□□□□ -1.02
PRKCH-228ENST00000640011 FLT4P35916 1363 aa8.71□□□□□ -1.02
PRKCH-228ENST00000640011 C4BP0C0L5 1744 aa8.71□□□□□ -1.02
PRKCH-228ENST00000640011 GNPATO15228 680 aa8.7□□□□□ -1.02
PRKCH-228ENST00000640011 CYP27B1O15528 508 aa8.7□□□□□ -1.02
PRKCH-228ENST00000640011 MMP10P09238 476 aa8.7□□□□□ -1.02
PRKCH-228ENST00000640011 NBR1Q14596 966 aa8.7□□□□□ -1.02
PRKCH-228ENST00000640011 RRS1Q15050 365 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms