RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-223ENST00000640001 CHPF2Q9P2E5 772 aa9.46□□□□□ -0.9
HNRNPU-223ENST00000640001 GCP02774 474 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 SDSP20132 328 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 MX1P20591 662 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 EVA1CP58658 441 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 HSP90AB4PQ58FF6 505 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 ARHGEF10O15013 1369 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 HTATSF1O43719 755 aaKnown RBP9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 CLASRPQ8N2M8 674 aaKnown RBP9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 IP6K1Q92551 441 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 CHRNA2Q15822 529 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 AMOTQ4VCS5 1084 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 DNAAF4Q8WXU2 420 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 PHAXQ9H814 394 aaKnown RBP9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 NAP1L2Q9ULW6 460 aaPredicted RBP9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 NBPF6Q5VWK0 638 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 NBPF4Q96M43 638 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 SIL1Q9H173 461 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 LGR6Q9HBX8 967 aa9.45□□□□□ -0.9
HNRNPU-223ENST00000640001 SPATA31D1Q6ZQQ2 1576 aa9.44□□□□□ -0.9
HNRNPU-223ENST00000640001 PTMSP20962 102 aa9.44□□□□□ -0.9
HNRNPU-223ENST00000640001 MYO5BQ9ULV0 1848 aa9.44□□□□□ -0.9
HNRNPU-223ENST00000640001 MCTP1Q6DN14 999 aa9.44□□□□□ -0.9
HNRNPU-223ENST00000640001 ADAMTS13Q76LX8 1427 aa9.44□□□□□ -0.9
HNRNPU-223ENST00000640001 IL17REQ8NFR9 667 aa9.44□□□□□ -0.9
HNRNPU-223ENST00000640001 SIRT2Q8IXJ6 389 aa9.44□□□□□ -0.9
HNRNPU-223ENST00000640001 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
HNRNPU-223ENST00000640001 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 PPP1R42Q7Z4L9 355 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 CABLES1Q8TDN4 633 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 STRN4Q9NRL3 753 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 SPG7Q9UQ90 795 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 USP19O94966 1318 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 COL3A1P02461 1466 aaPredicted RBP9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 PDE1AP54750 535 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 CNTROBQ8N137 903 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 KIAA0232Q92628 1395 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 IGSF1Q8N6C5 1336 aa9.43□□□□□ -0.9
HNRNPU-223ENST00000640001 SLC39A6Q13433 755 aa9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 PRDM11Q9NQV5 511 aa9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 DBF4Q9UBU7 674 aaPredicted RBP9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 CABP4P57796 275 aa9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 NUCB2P80303 420 aa9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 TOM1L2Q6ZVM7 507 aa9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 DDX54Q8TDD1 881 aaKnown RBP9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 RUFY2Q8WXA3 655 aa9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 MAP3K2Q9Y2U5 619 aa9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 AKAP4Q5JQC9 854 aa9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 DDX17Q92841 729 aaKnown RBP9.42□□□□□ -0.9
HNRNPU-223ENST00000640001 SKOR2Q2VWA4 1001 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 UPF3BQ9BZI7 483 aaKnown RBP9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 USP32Q8NFA0 1604 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 ATP8B2P98198 1209 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 TAF7LQ5H9L4 462 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 GORABQ5T7V8 394 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 KIF1BPQ96EK5 621 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 KCNQ3O43525 872 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 AACSQ86V21 672 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 RTL1A6NKG5 1358 aa9.41□□□□□ -0.9
HNRNPU-223ENST00000640001 PNMA6EA0A0J9YXQ4 647 aa9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 GSPT1P15170 499 aaKnown RBP9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 CWC27Q6UX04 472 aaKnown RBP9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 TNPO1Q92973 898 aaKnown RBP9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 SSFA2P28290 1259 aa9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 HSPA2P54652 639 aa9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 PLCB2Q00722 1185 aa9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 C19orf44Q9H6X5 657 aa9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 CIZ1Q9ULV3 898 aaPredicted RBP9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 SHPRHQ149N8 1683 aa9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 PTCH1Q13635 1447 aa9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 PTPRUQ92729 1446 aa9.4□□□□□ -0.9
HNRNPU-223ENST00000640001 PTMAP06454 111 aaKnown RBP9.4□□□□□ -0.91
HNRNPU-223ENST00000640001 PIP4K2AP48426 406 aaPredicted RBP9.4□□□□□ -0.91
HNRNPU-223ENST00000640001 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 JARID2Q92833 1246 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 FSD1Q9BTV5 496 aa9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 TECPR2O15040 1411 aa9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 ZKSCAN1P17029 563 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 RHPN1Q8TCX5 695 aa9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 ERC1Q8IUD2 1116 aa9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 NEUROD6Q96NK8 337 aa9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 MYD88Q99836 296 aa9.39□□□□□ -0.91
HNRNPU-223ENST00000640001 PTCD1O75127 700 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-223ENST00000640001 CWF19L2Q2TBE0 894 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-223ENST00000640001 OVOS2A0A0J9YW53 1432 aa9.38□□□□□ -0.91
HNRNPU-223ENST00000640001 OVOS2Q6IE36 1432 aa9.38□□□□□ -0.91
HNRNPU-223ENST00000640001 SNX21Q969T3 373 aa9.38□□□□□ -0.91
HNRNPU-223ENST00000640001 HYPKQ9NX55 129 aa9.38□□□□□ -0.91
HNRNPU-223ENST00000640001 PRPF40AO75400 957 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-223ENST00000640001 HSP90B1P14625 803 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-223ENST00000640001 EIF4A1P60842 406 aaKnown RBP9.37□□□□□ -0.91
HNRNPU-223ENST00000640001 CCDC8Q9H0W5 538 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-223ENST00000640001 PA2G4Q9UQ80 394 aaKnown RBP9.37□□□□□ -0.91
HNRNPU-223ENST00000640001 KIF24Q5T7B8 1368 aa9.37□□□□□ -0.91
HNRNPU-223ENST00000640001 GOLGA6L4A6NEF3 574 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms