RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 MSL1Q68DK7 614 aa23.99■■□□□ 1.43
VPS51-217ENST00000639871 KDM6AO15550 1401 aaPredicted RBP23.99■■□□□ 1.43
VPS51-217ENST00000639871 GPR162Q16538 588 aa23.97■■□□□ 1.43
VPS51-217ENST00000639871 UBR3Q6ZT12 1888 aa23.97■■□□□ 1.43
VPS51-217ENST00000639871 KLHL34Q8N239 644 aa23.97■■□□□ 1.43
VPS51-217ENST00000639871 SLC4A9Q96Q91 983 aa23.97■■□□□ 1.43
VPS51-217ENST00000639871 ATP6V1AP38606 617 aa23.96■■□□□ 1.43
VPS51-217ENST00000639871 SULT6B1Q6IMI4 303 aa23.96■■□□□ 1.43
VPS51-217ENST00000639871 ZNF530Q6P9A1 599 aaPredicted RBP23.96■■□□□ 1.43
VPS51-217ENST00000639871 SMIM5Q71RC9 77 aa23.96■■□□□ 1.43
VPS51-217ENST00000639871 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
VPS51-217ENST00000639871 CD2APQ9Y5K6 639 aa23.96■■□□□ 1.43
VPS51-217ENST00000639871 ZNF831Q5JPB2 1677 aa23.94■■□□□ 1.42
VPS51-217ENST00000639871 PHF14O94880 888 aa23.93■■□□□ 1.42
VPS51-217ENST00000639871 MTHFSP49914 203 aa23.93■■□□□ 1.42
VPS51-217ENST00000639871 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
VPS51-217ENST00000639871 GNPATO15228 680 aa23.91■■□□□ 1.42
VPS51-217ENST00000639871 YBX3P16989 372 aaKnown RBP eCLIP23.91■■□□□ 1.42
VPS51-217ENST00000639871 CABP4P57796 275 aa23.9■■□□□ 1.42
VPS51-217ENST00000639871 RC3H1Q5TC82 1133 aaKnown RBP23.9■■□□□ 1.42
VPS51-217ENST00000639871 CHD4Q14839 1912 aa23.89■■□□□ 1.42
VPS51-217ENST00000639871 C1orf141Q5JVX7 400 aa23.89■■□□□ 1.41
VPS51-217ENST00000639871 CNTNAP4Q9C0A0 1308 aa23.87■■□□□ 1.41
VPS51-217ENST00000639871 GRIN3BO60391 1043 aa23.87■■□□□ 1.41
VPS51-217ENST00000639871 NFATC2IPQ8NCF5 419 aa23.87■■□□□ 1.41
VPS51-217ENST00000639871 RBM42Q9BTD8 480 aaKnown RBP23.86■■□□□ 1.41
VPS51-217ENST00000639871 ADRA2BP18089 450 aa23.85■■□□□ 1.41
VPS51-217ENST00000639871 AKAP4Q5JQC9 854 aa23.85■■□□□ 1.41
VPS51-217ENST00000639871 CC2D1BQ5T0F9 858 aaKnown RBP23.85■■□□□ 1.41
VPS51-217ENST00000639871 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
VPS51-217ENST00000639871 RTCBQ9Y3I0 505 aaKnown RBP23.85■■□□□ 1.41
VPS51-217ENST00000639871 RPS6KA4O75676 772 aa23.83■■□□□ 1.41
VPS51-217ENST00000639871 TRAPPC3LQ5T215 181 aa23.83■■□□□ 1.41
VPS51-217ENST00000639871 COL5A3P25940 1745 aaPredicted RBP23.83■■□□□ 1.41
VPS51-217ENST00000639871 DIAPH1O60610 1272 aaKnown RBP23.82■■□□□ 1.4
VPS51-217ENST00000639871 ARHGEF1Q92888 912 aaKnown RBP23.82■■□□□ 1.4
VPS51-217ENST00000639871 COL3A1P02461 1466 aaPredicted RBP23.81■■□□□ 1.4
VPS51-217ENST00000639871 MRC1P22897 1456 aa23.81■■□□□ 1.4
VPS51-217ENST00000639871 CICQ96RK0 1608 aaPredicted RBP23.81■■□□□ 1.4
VPS51-217ENST00000639871 PTCD1O75127 700 aaKnown RBP23.8■■□□□ 1.4
VPS51-217ENST00000639871 MMP10P09238 476 aa23.8■■□□□ 1.4
VPS51-217ENST00000639871 HMOX1P09601 288 aa23.8■■□□□ 1.4
VPS51-217ENST00000639871 NLGN1Q8N2Q7 840 aa23.8■■□□□ 1.4
VPS51-217ENST00000639871 SLC52A2Q9HAB3 445 aa23.8■■□□□ 1.4
VPS51-217ENST00000639871 LGR6Q9HBX8 967 aa23.8■■□□□ 1.4
VPS51-217ENST00000639871 SCN11AQ9UI33 1791 aa23.78■■□□□ 1.4
VPS51-217ENST00000639871 RNMTO43148 476 aaKnown RBP23.78■■□□□ 1.4
VPS51-217ENST00000639871 GYS1P13807 737 aa23.78■■□□□ 1.4
VPS51-217ENST00000639871 MTHFSDQ2M296 383 aaKnown RBP23.78■■□□□ 1.4
VPS51-217ENST00000639871 ADAMTS7Q9UKP4 1686 aa23.77■■□□□ 1.4
VPS51-217ENST00000639871 CRKLP46109 303 aaKnown RBP23.77■■□□□ 1.4
VPS51-217ENST00000639871 MYH14Q7Z406 1995 aaKnown RBP23.76■■□□□ 1.39
VPS51-217ENST00000639871 INTS5Q6P9B9 1019 aaKnown RBP23.75■■□□□ 1.39
VPS51-217ENST00000639871 TJP1Q07157 1748 aa23.74■■□□□ 1.39
VPS51-217ENST00000639871 RFC4P35249 363 aa23.74■■□□□ 1.39
VPS51-217ENST00000639871 C10orf71Q711Q0 1435 aa23.73■■□□□ 1.39
VPS51-217ENST00000639871 PXDNLA1KZ92 1463 aa23.72■■□□□ 1.39
VPS51-217ENST00000639871 KIF13BQ9NQT8 1826 aa23.71■■□□□ 1.39
VPS51-217ENST00000639871 USP42Q9H9J4 1324 aaKnown RBP23.71■■□□□ 1.39
VPS51-217ENST00000639871 TGFB2P61812 414 aa23.71■■□□□ 1.39
VPS51-217ENST00000639871 KCPQ6ZWJ8 1503 aa23.7■■□□□ 1.38
VPS51-217ENST00000639871 ADCY9O60503 1353 aa23.7■■□□□ 1.38
VPS51-217ENST00000639871 C1QTNF8P60827 252 aa23.7■■□□□ 1.38
VPS51-217ENST00000639871 SLC39A6Q13433 755 aa23.7■■□□□ 1.38
VPS51-217ENST00000639871 DNAJC10Q8IXB1 793 aa23.7■■□□□ 1.38
VPS51-217ENST00000639871 CYP19A1P11511 503 aaPredicted RBP23.69■■□□□ 1.38
VPS51-217ENST00000639871 C4AP0C0L4 1744 aa23.69■■□□□ 1.38
VPS51-217ENST00000639871 KIAA1551Q9HCM1 1747 aa23.68■■□□□ 1.38
VPS51-217ENST00000639871 VSIG10Q8N0Z9 540 aa23.68■■□□□ 1.38
VPS51-217ENST00000639871 FKBP8Q14318 412 aa23.67■■□□□ 1.38
VPS51-217ENST00000639871 CCDC87Q9NVE4 849 aa23.67■■□□□ 1.38
VPS51-217ENST00000639871 SRP68Q9UHB9 627 aaKnown RBP23.67■■□□□ 1.38
VPS51-217ENST00000639871 SOS1Q07889 1333 aaPredicted RBP23.66■■□□□ 1.38
VPS51-217ENST00000639871 U2SURPO15042 1029 aaKnown RBP23.66■■□□□ 1.38
VPS51-217ENST00000639871 IL17REQ8NFR9 667 aa23.66■■□□□ 1.38
VPS51-217ENST00000639871 ATP10DQ9P241 1426 aa23.66■■□□□ 1.38
VPS51-217ENST00000639871 GAS2L2Q8NHY3 880 aa23.65■■□□□ 1.38
VPS51-217ENST00000639871 WWC3Q9ULE0 1092 aa23.65■■□□□ 1.38
VPS51-217ENST00000639871 PARP3Q9Y6F1 533 aa23.65■■□□□ 1.38
VPS51-217ENST00000639871 GIGYF1O75420 1035 aaPredicted RBP23.64■■□□□ 1.37
VPS51-217ENST00000639871 TM4SF1P30408 202 aa23.64■■□□□ 1.37
VPS51-217ENST00000639871 DDR1Q08345 913 aa23.64■■□□□ 1.37
VPS51-217ENST00000639871 A0A0G2JLW4 131 aa23.63■■□□□ 1.37
VPS51-217ENST00000639871 GNAT3A8MTJ3 354 aa23.63■■□□□ 1.37
VPS51-217ENST00000639871 KCNA3P22001 575 aa23.63■■□□□ 1.37
VPS51-217ENST00000639871 CNGB1Q14028 1251 aaPredicted RBP23.63■■□□□ 1.37
VPS51-217ENST00000639871 CEMIPQ8WUJ3 1361 aa23.63■■□□□ 1.37
VPS51-217ENST00000639871 DPEP1P16444 411 aa23.62■■□□□ 1.37
VPS51-217ENST00000639871 RSPH6AQ9H0K4 717 aa23.62■■□□□ 1.37
VPS51-217ENST00000639871 UBR2Q8IWV8 1755 aa23.61■■□□□ 1.37
VPS51-217ENST00000639871 PPP2R1AP30153 589 aa23.61■■□□□ 1.37
VPS51-217ENST00000639871 PHACTR3Q96KR7 559 aa23.61■■□□□ 1.37
VPS51-217ENST00000639871 ZBTB1Q9Y2K1 713 aa23.61■■□□□ 1.37
VPS51-217ENST00000639871 POLRMTO00411 1230 aaKnown RBP23.6■■□□□ 1.37
VPS51-217ENST00000639871 CFAP53Q96M91 514 aa23.6■■□□□ 1.37
VPS51-217ENST00000639871 NARFQ9UHQ1 456 aa23.6■■□□□ 1.37
VPS51-217ENST00000639871 USPL1Q5W0Q7 1092 aa23.59■■□□□ 1.37
VPS51-217ENST00000639871 ZNF790Q6PG37 636 aa23.59■■□□□ 1.37
VPS51-217ENST00000639871 VIRMAQ69YN4 1812 aaKnown RBP23.59■■□□□ 1.37
VPS51-217ENST00000639871 COL15A1P39059 1388 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms