RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 TAF7Q15545 349 aaPredicted RBP27.1■■□□□ 1.93
SCARB2-219ENST00000639738 DDB1Q16531 1140 aa27.09■■□□□ 1.93
SCARB2-219ENST00000639738 BABAM1Q9NWV8 329 aa27.09■■□□□ 1.93
SCARB2-219ENST00000639738 LAS1LQ9Y4W2 734 aaKnown RBP27.08■■□□□ 1.93
SCARB2-219ENST00000639738 MIS18AQ9NYP9 233 aa27.07■■□□□ 1.92
SCARB2-219ENST00000639738 MARCH10Q8NA82 808 aaPredicted RBP27.06■■□□□ 1.92
SCARB2-219ENST00000639738 SLC52A2Q9HAB3 445 aa27.06■■□□□ 1.92
SCARB2-219ENST00000639738 EXOSC9Q06265 439 aaKnown RBP27.05■■□□□ 1.92
SCARB2-219ENST00000639738 ITGB4P16144 1822 aa27.04■■□□□ 1.92
SCARB2-219ENST00000639738 ERVV-2B6SEH9 535 aa27.04■■□□□ 1.92
SCARB2-219ENST00000639738 TEFQ10587 303 aa27.03■■□□□ 1.92
SCARB2-219ENST00000639738 BRWD3Q6RI45 1802 aa27.02■■□□□ 1.92
SCARB2-219ENST00000639738 NFATC2IPQ8NCF5 419 aa27.01■■□□□ 1.91
SCARB2-219ENST00000639738 TSPYL4Q9UJ04 414 aa27.01■■□□□ 1.91
SCARB2-219ENST00000639738 DOT1LQ8TEK3 1739 aa27■■□□□ 1.91
SCARB2-219ENST00000639738 C8orf58Q8NAV2 365 aa27■■□□□ 1.91
SCARB2-219ENST00000639738 PAPPAQ13219 1627 aa26.99■■□□□ 1.91
SCARB2-219ENST00000639738 KCNQ3O43525 872 aa26.99■■□□□ 1.91
SCARB2-219ENST00000639738 TSPYL6Q8N831 410 aa26.99■■□□□ 1.91
SCARB2-219ENST00000639738 BTBD11A6QL63 1104 aa26.98■■□□□ 1.91
SCARB2-219ENST00000639738 CT47B1P0C2W7 299 aaPredicted RBP26.97■■□□□ 1.91
SCARB2-219ENST00000639738 KRT24Q2M2I5 525 aa26.97■■□□□ 1.91
SCARB2-219ENST00000639738 SEPT12Q8IYM1 358 aa26.97■■□□□ 1.91
SCARB2-219ENST00000639738 RCAN3Q9UKA8 241 aa26.97■■□□□ 1.91
SCARB2-219ENST00000639738 HEG1Q9ULI3 1381 aa26.96■■□□□ 1.91
SCARB2-219ENST00000639738 CABP4P57796 275 aa26.96■■□□□ 1.91
SCARB2-219ENST00000639738 VAMP4O75379 141 aa26.95■■□□□ 1.91
SCARB2-219ENST00000639738 UBR2Q8IWV8 1755 aa26.95■■□□□ 1.91
SCARB2-219ENST00000639738 RNF123Q5XPI4 1314 aa26.95■■□□□ 1.91
SCARB2-219ENST00000639738 EIF4A1P60842 406 aaKnown RBP26.95■■□□□ 1.9
SCARB2-219ENST00000639738 BCL9O00512 1426 aa26.95■■□□□ 1.9
SCARB2-219ENST00000639738 ZNF790Q6PG37 636 aa26.92■■□□□ 1.9
SCARB2-219ENST00000639738 RARSP54136 660 aaKnown RBP26.91■■□□□ 1.9
SCARB2-219ENST00000639738 SLC39A6Q13433 755 aa26.91■■□□□ 1.9
SCARB2-219ENST00000639738 PIGBQ92521 554 aa26.91■■□□□ 1.9
SCARB2-219ENST00000639738 TWISTNBQ3B726 338 aaPredicted RBP26.9■■□□□ 1.9
SCARB2-219ENST00000639738 SUPT16HQ9Y5B9 1047 aaKnown RBP26.9■■□□□ 1.9
SCARB2-219ENST00000639738 SBF2Q86WG5 1849 aa26.9■■□□□ 1.9
SCARB2-219ENST00000639738 KCPQ6ZWJ8 1503 aa26.89■■□□□ 1.9
SCARB2-219ENST00000639738 KAT6BQ8WYB5 2073 aa26.89■■□□□ 1.89
SCARB2-219ENST00000639738 A0A0G2JS52 829 aa26.89■■□□□ 1.89
SCARB2-219ENST00000639738 ELL2O00472 640 aaPredicted RBP26.89■■□□□ 1.89
SCARB2-219ENST00000639738 PRIM1P49642 420 aaKnown RBP26.89■■□□□ 1.89
SCARB2-219ENST00000639738 MYT1Q01538 1121 aa26.89■■□□□ 1.89
SCARB2-219ENST00000639738 TMOD3Q9NYL9 352 aa26.88■■□□□ 1.89
SCARB2-219ENST00000639738 ZNF428Q96B54 188 aa26.87■■□□□ 1.89
SCARB2-219ENST00000639738 BCAR3O75815 825 aa26.86■■□□□ 1.89
SCARB2-219ENST00000639738 SOS1Q07889 1333 aaPredicted RBP26.86■■□□□ 1.89
SCARB2-219ENST00000639738 C5P01031 1676 aa26.86■■□□□ 1.89
SCARB2-219ENST00000639738 NHSQ6T4R5 1651 aa26.86■■□□□ 1.89
SCARB2-219ENST00000639738 FAM182BQ5T319 152 aa26.85■■□□□ 1.89
SCARB2-219ENST00000639738 SSH1Q8WYL5 1049 aa26.85■■□□□ 1.89
SCARB2-219ENST00000639738 ZNF496Q96IT1 587 aaPredicted RBP26.85■■□□□ 1.89
SCARB2-219ENST00000639738 ATG3Q9NT62 314 aa26.85■■□□□ 1.89
SCARB2-219ENST00000639738 KCNQ2O43526 872 aa26.84■■□□□ 1.89
SCARB2-219ENST00000639738 GIGYF1O75420 1035 aaPredicted RBP26.84■■□□□ 1.89
SCARB2-219ENST00000639738 ALDH1L2Q3SY69 923 aa26.84■■□□□ 1.89
SCARB2-219ENST00000639738 ACSBG1Q96GR2 724 aa26.84■■□□□ 1.89
SCARB2-219ENST00000639738 HOXB7P09629 217 aa26.83■■□□□ 1.89
SCARB2-219ENST00000639738 ASAP1Q9ULH1 1129 aa26.83■■□□□ 1.89
SCARB2-219ENST00000639738 BRPF1P55201 1214 aaPredicted RBP26.82■■□□□ 1.88
SCARB2-219ENST00000639738 CCDC125Q86Z20 511 aa26.82■■□□□ 1.88
SCARB2-219ENST00000639738 KRT27Q7Z3Y8 459 aa26.81■■□□□ 1.88
SCARB2-219ENST00000639738 PRAMEF22A3QJZ6 481 aa26.8■■□□□ 1.88
SCARB2-219ENST00000639738 PTF1AQ7RTS3 328 aa26.8■■□□□ 1.88
SCARB2-219ENST00000639738 FMNL2Q96PY5 1086 aa26.8■■□□□ 1.88
SCARB2-219ENST00000639738 RRP1P56182 461 aaKnown RBP26.79■■□□□ 1.88
SCARB2-219ENST00000639738 TTC5Q8N0Z6 440 aa26.79■■□□□ 1.88
SCARB2-219ENST00000639738 MRPL50Q8N5N7 158 aaKnown RBP26.79■■□□□ 1.88
SCARB2-219ENST00000639738 CACNA1FO60840 1977 aa26.79■■□□□ 1.88
SCARB2-219ENST00000639738 BTAF1O14981 1849 aa26.78■■□□□ 1.88
SCARB2-219ENST00000639738 SYTL4Q96C24 671 aaPredicted RBP26.78■■□□□ 1.88
SCARB2-219ENST00000639738 BCL2L13Q9BXK5 485 aa26.78■■□□□ 1.88
SCARB2-219ENST00000639738 LAMB4A4D0S4 1761 aa26.77■■□□□ 1.88
SCARB2-219ENST00000639738 SLC4A9Q96Q91 983 aa26.75■■□□□ 1.87
SCARB2-219ENST00000639738 TCERG1O14776 1098 aaKnown RBP26.75■■□□□ 1.87
SCARB2-219ENST00000639738 PLIN1O60240 522 aa26.75■■□□□ 1.87
SCARB2-219ENST00000639738 SNRPA1P09661 255 aaKnown RBP26.75■■□□□ 1.87
SCARB2-219ENST00000639738 SMC4Q9NTJ3 1288 aa26.75■■□□□ 1.87
SCARB2-219ENST00000639738 CICQ96RK0 1608 aaPredicted RBP26.74■■□□□ 1.87
SCARB2-219ENST00000639738 TJP1Q07157 1748 aa26.73■■□□□ 1.87
SCARB2-219ENST00000639738 PTCD1O75127 700 aaKnown RBP26.73■■□□□ 1.87
SCARB2-219ENST00000639738 FAM196AQ6ZSG2 479 aa26.73■■□□□ 1.87
SCARB2-219ENST00000639738 USP16Q9Y5T5 823 aa26.73■■□□□ 1.87
SCARB2-219ENST00000639738 ZNF831Q5JPB2 1677 aa26.72■■□□□ 1.87
SCARB2-219ENST00000639738 HDGFL1Q5TGJ6 251 aa26.72■■□□□ 1.87
SCARB2-219ENST00000639738 CCDC30Q5VVM6 783 aa26.72■■□□□ 1.87
SCARB2-219ENST00000639738 VSIG10Q8N0Z9 540 aa26.72■■□□□ 1.87
SCARB2-219ENST00000639738 NECTIN2Q92692 538 aa26.7■■□□□ 1.86
SCARB2-219ENST00000639738 SRCAPQ6ZRS2 3230 aa26.69■■□□□ 1.86
SCARB2-219ENST00000639738 EIF2S2P20042 333 aaKnown RBP26.69■■□□□ 1.86
SCARB2-219ENST00000639738 PDIA6Q15084 440 aa26.69■■□□□ 1.86
SCARB2-219ENST00000639738 BCL11BQ9C0K0 894 aaPredicted RBP26.69■■□□□ 1.86
SCARB2-219ENST00000639738 NOB1Q9ULX3 412 aaKnown RBP26.69■■□□□ 1.86
SCARB2-219ENST00000639738 LY75O60449 1722 aa26.68■■□□□ 1.86
SCARB2-219ENST00000639738 SLC4A2P04920 1241 aa26.68■■□□□ 1.86
SCARB2-219ENST00000639738 PALLDQ8WX93 1383 aa26.68■■□□□ 1.86
SCARB2-219ENST00000639738 C20orf194Q5TEA3 1177 aa26.67■■□□□ 1.86
SCARB2-219ENST00000639738 G2E3Q7L622 706 aa26.67■■□□□ 1.86
SCARB2-219ENST00000639738 SMARCC1Q92922 1105 aaPredicted RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms