RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CHRNA2Q15822 529 aa5.61□□□□□ -1.51
CCDC7-213ENST00000639290 COL26A1Q96A83 441 aa5.61□□□□□ -1.51
CCDC7-213ENST00000639290 WDR17Q8IZU2 1322 aa5.61□□□□□ -1.51
CCDC7-213ENST00000639290 CACNA1AO00555 2505 aa5.61□□□□□ -1.51
CCDC7-213ENST00000639290 CASP8AP2Q9UKL3 1982 aa5.61□□□□□ -1.51
CCDC7-213ENST00000639290 SMG6Q86US8 1419 aaKnown RBP5.61□□□□□ -1.51
CCDC7-213ENST00000639290 KIF1BO60333 1816 aa5.61□□□□□ -1.51
CCDC7-213ENST00000639290 CARD10Q9BWT7 1032 aa5.6□□□□□ -1.51
CCDC7-213ENST00000639290 CLEC11AQ9Y240 323 aa5.6□□□□□ -1.51
CCDC7-213ENST00000639290 PIM2Q9P1W9 311 aa5.6□□□□□ -1.51
CCDC7-213ENST00000639290 DALRD3Q5D0E6 543 aaKnown RBP5.59□□□□□ -1.51
CCDC7-213ENST00000639290 AKAP4Q5JQC9 854 aa5.59□□□□□ -1.51
CCDC7-213ENST00000639290 L3MBTL3Q96JM7 780 aaPredicted RBP5.59□□□□□ -1.51
CCDC7-213ENST00000639290 TRPM7Q96QT4 1865 aa5.59□□□□□ -1.51
CCDC7-213ENST00000639290 PPIP5K1Q6PFW1 1433 aa5.59□□□□□ -1.51
CCDC7-213ENST00000639290 TAF1LQ8IZX4 1826 aa5.59□□□□□ -1.51
CCDC7-213ENST00000639290 C4AP0C0L4 1744 aa5.59□□□□□ -1.51
CCDC7-213ENST00000639290 RGS20O76081 388 aa5.59□□□□□ -1.51
CCDC7-213ENST00000639290 CCDC87Q9NVE4 849 aa5.59□□□□□ -1.51
CCDC7-213ENST00000639290 MSL1Q68DK7 614 aa5.58□□□□□ -1.52
CCDC7-213ENST00000639290 TLL2Q9Y6L7 1015 aa5.58□□□□□ -1.52
CCDC7-213ENST00000639290 TOGARAM1Q9Y4F4 1720 aa5.58□□□□□ -1.52
CCDC7-213ENST00000639290 UBR3Q6ZT12 1888 aa5.58□□□□□ -1.52
CCDC7-213ENST00000639290 NOM1Q5C9Z4 860 aaKnown RBP5.58□□□□□ -1.52
CCDC7-213ENST00000639290 ABT1Q9ULW3 272 aaKnown RBP5.58□□□□□ -1.52
CCDC7-213ENST00000639290 MINK1Q8N4C8 1332 aaPredicted RBP5.58□□□□□ -1.52
CCDC7-213ENST00000639290 SSFA2P28290 1259 aa5.57□□□□□ -1.52
CCDC7-213ENST00000639290 PRO3102Q9H379 93 aa5.57□□□□□ -1.52
CCDC7-213ENST00000639290 DAPK1P53355 1430 aa5.57□□□□□ -1.52
CCDC7-213ENST00000639290 ZNF326Q5BKZ1 582 aaKnown RBP5.57□□□□□ -1.52
CCDC7-213ENST00000639290 PNMA8AQ86V59 439 aaPredicted RBP5.57□□□□□ -1.52
CCDC7-213ENST00000639290 C4BP0C0L5 1744 aa5.57□□□□□ -1.52
CCDC7-213ENST00000639290 POLR3AO14802 1390 aaPredicted RBP5.57□□□□□ -1.52
CCDC7-213ENST00000639290 ANKRD36BQ8N2N9 1353 aa5.57□□□□□ -1.52
CCDC7-213ENST00000639290 ACEP12821 1306 aa5.56□□□□□ -1.52
CCDC7-213ENST00000639290 DLEC1Q9Y238 1755 aa5.56□□□□□ -1.52
CCDC7-213ENST00000639290 DPEP1P16444 411 aa5.56□□□□□ -1.52
CCDC7-213ENST00000639290 NOGQ13253 232 aa5.56□□□□□ -1.52
CCDC7-213ENST00000639290 FBXO46Q6PJ61 603 aaPredicted RBP5.56□□□□□ -1.52
CCDC7-213ENST00000639290 TOM1L2Q6ZVM7 507 aa5.56□□□□□ -1.52
CCDC7-213ENST00000639290 RRP7BPQ9NSQ0 103 aa5.56□□□□□ -1.52
CCDC7-213ENST00000639290 CCNL1Q9UK58 526 aaPredicted RBP5.56□□□□□ -1.52
CCDC7-213ENST00000639290 PRKAR2AP13861 404 aaKnown RBP5.55□□□□□ -1.52
CCDC7-213ENST00000639290 ZC3H6P61129 1189 aaKnown RBP5.55□□□□□ -1.52
CCDC7-213ENST00000639290 KCNA3P22001 575 aa5.55□□□□□ -1.52
CCDC7-213ENST00000639290 LTBP3Q9NS15 1303 aa5.55□□□□□ -1.52
CCDC7-213ENST00000639290 TNFRSF10AO00220 468 aa5.54□□□□□ -1.52
CCDC7-213ENST00000639290 MAP3K12Q12852 859 aa5.54□□□□□ -1.52
CCDC7-213ENST00000639290 TAF1DQ9H5J8 278 aaPredicted RBP5.54□□□□□ -1.52
CCDC7-213ENST00000639290 ANKRD50Q9ULJ7 1429 aa5.54□□□□□ -1.52
CCDC7-213ENST00000639290 NUTM2FA1L443 756 aa5.54□□□□□ -1.52
CCDC7-213ENST00000639290 DDX21Q9NR30 783 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC7-213ENST00000639290 NSD2O96028 1365 aa5.53□□□□□ -1.52
CCDC7-213ENST00000639290 A0A0G2JLW4 131 aa5.53□□□□□ -1.52
CCDC7-213ENST00000639290 PRR29P0C7W0 189 aa5.53□□□□□ -1.52
CCDC7-213ENST00000639290 HCN4Q9Y3Q4 1203 aa5.53□□□□□ -1.52
CCDC7-213ENST00000639290 PLEKHH1Q9ULM0 1364 aa5.53□□□□□ -1.52
CCDC7-213ENST00000639290 PLEKHG5O94827 1062 aa5.53□□□□□ -1.52
CCDC7-213ENST00000639290 NLGN1Q8N2Q7 840 aa5.53□□□□□ -1.52
CCDC7-213ENST00000639290 TSKSQ9UJT2 592 aa5.53□□□□□ -1.52
CCDC7-213ENST00000639290 CYP4F22Q6NT55 531 aa5.52□□□□□ -1.53
CCDC7-213ENST00000639290 CNTROBQ8N137 903 aa5.52□□□□□ -1.53
CCDC7-213ENST00000639290 PCNTO95613 3336 aa5.52□□□□□ -1.53
CCDC7-213ENST00000639290 DOT1LQ8TEK3 1739 aa5.52□□□□□ -1.53
CCDC7-213ENST00000639290 NLRP13Q86W25 1043 aa5.52□□□□□ -1.53
CCDC7-213ENST00000639290 ACSBG1Q96GR2 724 aa5.52□□□□□ -1.53
CCDC7-213ENST00000639290 FKBP8Q14318 412 aa5.51□□□□□ -1.53
CCDC7-213ENST00000639290 WAPLQ7Z5K2 1190 aa5.51□□□□□ -1.53
CCDC7-213ENST00000639290 C1QTNF1Q9BXJ1 281 aa5.51□□□□□ -1.53
CCDC7-213ENST00000639290 RBM27Q9P2N5 1060 aaKnown RBP5.51□□□□□ -1.53
CCDC7-213ENST00000639290 PAPPA2Q9BXP8 1791 aa5.51□□□□□ -1.53
CCDC7-213ENST00000639290 USP47Q96K76 1375 aa5.51□□□□□ -1.53
CCDC7-213ENST00000639290 CCDC88AQ3V6T2 1871 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 AK7Q96M32 723 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 CPSF1Q10570 1443 aaKnown RBP5.5□□□□□ -1.53
CCDC7-213ENST00000639290 AKAP11Q9UKA4 1901 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 KAT6BQ8WYB5 2073 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 KIF7Q2M1P5 1343 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 RPTORQ8N122 1335 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 H0YGN5 161 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 GCP02774 474 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 MMP10P09238 476 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 FMR1Q06787 632 aaKnown RBP eCLIP5.5□□□□□ -1.53
CCDC7-213ENST00000639290 FAM109BQ6ICB4 259 aaPredicted RBP5.5□□□□□ -1.53
CCDC7-213ENST00000639290 PAXIP1Q6ZW49 1069 aaPredicted RBP5.5□□□□□ -1.53
CCDC7-213ENST00000639290 NGDNQ8NEJ9 315 aaKnown RBP5.5□□□□□ -1.53
CCDC7-213ENST00000639290 HACL1Q9UJ83 578 aa5.5□□□□□ -1.53
CCDC7-213ENST00000639290 FAM208AQ9UK61 1670 aaKnown RBP5.5□□□□□ -1.53
CCDC7-213ENST00000639290 AOC2O75106 756 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 PAK3O75914 559 aaPredicted RBP5.49□□□□□ -1.53
CCDC7-213ENST00000639290 POTEIP0CG38 1075 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 POTEJP0CG39 1038 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 UBTFP17480 764 aaKnown RBP5.49□□□□□ -1.53
CCDC7-213ENST00000639290 MAP3K11Q16584 847 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 CIAPIN1Q6FI81 312 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 VPS8Q8N3P4 1428 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 CABP2Q9NPB3 220 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 MTMR10Q9NXD2 777 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 ZNF831Q5JPB2 1677 aa5.49□□□□□ -1.53
CCDC7-213ENST00000639290 CAPN2P17655 700 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms