RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 PNPLA7Q6ZV29 1317 aa23.93■■□□□ 1.42
SPIN3-220ENST00000639257 RNMTO43148 476 aaKnown RBP23.93■■□□□ 1.42
SPIN3-220ENST00000639257 CABP4P57796 275 aa23.93■■□□□ 1.42
SPIN3-220ENST00000639257 GAS2L2Q8NHY3 880 aa23.93■■□□□ 1.42
SPIN3-220ENST00000639257 PHACTR3Q96KR7 559 aa23.93■■□□□ 1.42
SPIN3-220ENST00000639257 LGR6Q9HBX8 967 aa23.93■■□□□ 1.42
SPIN3-220ENST00000639257 MYBBP1AQ9BQG0 1328 aaKnown RBP23.92■■□□□ 1.42
SPIN3-220ENST00000639257 U2AF1L5P0DN76 240 aaPredicted RBP23.92■■□□□ 1.42
SPIN3-220ENST00000639257 U2AF1Q01081 240 aaKnown RBP eCLIP23.92■■□□□ 1.42
SPIN3-220ENST00000639257 SLC52A2Q9HAB3 445 aa23.92■■□□□ 1.42
SPIN3-220ENST00000639257 MAP3K5Q99683 1374 aa23.91■■□□□ 1.42
SPIN3-220ENST00000639257 NFATC2IPQ8NCF5 419 aa23.91■■□□□ 1.42
SPIN3-220ENST00000639257 SLC4A9Q96Q91 983 aa23.91■■□□□ 1.42
SPIN3-220ENST00000639257 SPON1Q9HCB6 807 aa23.91■■□□□ 1.42
SPIN3-220ENST00000639257 CEMIPQ8WUJ3 1361 aa23.9■■□□□ 1.42
SPIN3-220ENST00000639257 SIPA1L3O60292 1781 aaPredicted RBP23.89■■□□□ 1.42
SPIN3-220ENST00000639257 ITPK1Q13572 414 aa23.89■■□□□ 1.41
SPIN3-220ENST00000639257 SGIP1Q9BQI5 828 aa23.89■■□□□ 1.41
SPIN3-220ENST00000639257 PRKRIP1Q9H875 184 aaPredicted RBP23.89■■□□□ 1.41
SPIN3-220ENST00000639257 COL5A3P25940 1745 aaPredicted RBP23.89■■□□□ 1.41
SPIN3-220ENST00000639257 UBR3Q6ZT12 1888 aa23.89■■□□□ 1.41
SPIN3-220ENST00000639257 PTGER2P43116 358 aa23.88■■□□□ 1.41
SPIN3-220ENST00000639257 MTFR1LQ9H019 292 aa23.88■■□□□ 1.41
SPIN3-220ENST00000639257 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
SPIN3-220ENST00000639257 GNAT3A8MTJ3 354 aa23.87■■□□□ 1.41
SPIN3-220ENST00000639257 LINC00116Q8NCU8 138 aa23.87■■□□□ 1.41
SPIN3-220ENST00000639257 IL17REQ8NFR9 667 aa23.87■■□□□ 1.41
SPIN3-220ENST00000639257 SLC16A10Q8TF71 515 aa23.87■■□□□ 1.41
SPIN3-220ENST00000639257 TFCP2L1Q9NZI6 479 aa23.87■■□□□ 1.41
SPIN3-220ENST00000639257 PLEKHF1Q96S99 279 aa23.86■■□□□ 1.41
SPIN3-220ENST00000639257 UBR2Q8IWV8 1755 aa23.86■■□□□ 1.41
SPIN3-220ENST00000639257 ZBTB7AO95365 584 aa23.85■■□□□ 1.41
SPIN3-220ENST00000639257 ATP6V1AP38606 617 aa23.85■■□□□ 1.41
SPIN3-220ENST00000639257 KCPQ6ZWJ8 1503 aa23.84■■□□□ 1.41
SPIN3-220ENST00000639257 TJP1Q07157 1748 aa23.84■■□□□ 1.41
SPIN3-220ENST00000639257 AMIGO3Q86WK7 504 aa23.84■■□□□ 1.41
SPIN3-220ENST00000639257 COL23A1Q86Y22 540 aaPredicted RBP23.82■■□□□ 1.4
SPIN3-220ENST00000639257 FLAD1Q8NFF5 587 aa23.81■■□□□ 1.4
SPIN3-220ENST00000639257 CNTNAP4Q9C0A0 1308 aa23.81■■□□□ 1.4
SPIN3-220ENST00000639257 MYH14Q7Z406 1995 aaKnown RBP23.8■■□□□ 1.4
SPIN3-220ENST00000639257 HTATSF1O43719 755 aaKnown RBP23.8■■□□□ 1.4
SPIN3-220ENST00000639257 RC3H1Q5TC82 1133 aaKnown RBP23.8■■□□□ 1.4
SPIN3-220ENST00000639257 SSFA2P28290 1259 aa23.79■■□□□ 1.4
SPIN3-220ENST00000639257 ATF5Q9Y2D1 282 aaPredicted RBP23.79■■□□□ 1.4
SPIN3-220ENST00000639257 AK7Q96M32 723 aa23.78■■□□□ 1.4
SPIN3-220ENST00000639257 RBM42Q9BTD8 480 aaKnown RBP23.78■■□□□ 1.4
SPIN3-220ENST00000639257 DLG5Q8TDM6 1919 aa23.78■■□□□ 1.4
SPIN3-220ENST00000639257 PTCD1O75127 700 aaKnown RBP23.77■■□□□ 1.4
SPIN3-220ENST00000639257 SLC39A6Q13433 755 aa23.76■■□□□ 1.39
SPIN3-220ENST00000639257 VSIG10Q8N0Z9 540 aa23.76■■□□□ 1.39
SPIN3-220ENST00000639257 PNNQ9H307 717 aaKnown RBP23.76■■□□□ 1.39
SPIN3-220ENST00000639257 TEFQ10587 303 aa23.75■■□□□ 1.39
SPIN3-220ENST00000639257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.74■■□□□ 1.39
SPIN3-220ENST00000639257 GNPATO15228 680 aa23.73■■□□□ 1.39
SPIN3-220ENST00000639257 NFE2L2Q16236 605 aa23.73■■□□□ 1.39
SPIN3-220ENST00000639257 ZNF790Q6PG37 636 aa23.73■■□□□ 1.39
SPIN3-220ENST00000639257 RPS6KA4O75676 772 aa23.72■■□□□ 1.39
SPIN3-220ENST00000639257 ADRA2BP18089 450 aa23.71■■□□□ 1.39
SPIN3-220ENST00000639257 SMIM5Q71RC9 77 aa23.71■■□□□ 1.39
SPIN3-220ENST00000639257 MCM10Q7L590 875 aa23.71■■□□□ 1.39
SPIN3-220ENST00000639257 CRKLP46109 303 aaKnown RBP23.7■■□□□ 1.38
SPIN3-220ENST00000639257 INTS5Q6P9B9 1019 aaKnown RBP23.7■■□□□ 1.38
SPIN3-220ENST00000639257 DNAJC10Q8IXB1 793 aa23.7■■□□□ 1.38
SPIN3-220ENST00000639257 RTF1Q92541 710 aaKnown RBP23.7■■□□□ 1.38
SPIN3-220ENST00000639257 C4AP0C0L4 1744 aa23.7■■□□□ 1.38
SPIN3-220ENST00000639257 HEG1Q9ULI3 1381 aa23.69■■□□□ 1.38
SPIN3-220ENST00000639257 NEFMP07197 916 aa23.69■■□□□ 1.38
SPIN3-220ENST00000639257 CYP19A1P11511 503 aaPredicted RBP23.69■■□□□ 1.38
SPIN3-220ENST00000639257 ZNF496Q96IT1 587 aaPredicted RBP23.69■■□□□ 1.38
SPIN3-220ENST00000639257 ARXQ96QS3 562 aa23.69■■□□□ 1.38
SPIN3-220ENST00000639257 PPP1R1BQ9UD71 204 aaPredicted RBP23.69■■□□□ 1.38
SPIN3-220ENST00000639257 RTCBQ9Y3I0 505 aaKnown RBP23.69■■□□□ 1.38
SPIN3-220ENST00000639257 DCTN1Q14203 1278 aa23.68■■□□□ 1.38
SPIN3-220ENST00000639257 MAPK8IP3Q9UPT6 1336 aa23.67■■□□□ 1.38
SPIN3-220ENST00000639257 PHF14O94880 888 aa23.67■■□□□ 1.38
SPIN3-220ENST00000639257 TTC5Q8N0Z6 440 aa23.67■■□□□ 1.38
SPIN3-220ENST00000639257 BTBD11A6QL63 1104 aa23.66■■□□□ 1.38
SPIN3-220ENST00000639257 POLD1P28340 1107 aa23.66■■□□□ 1.38
SPIN3-220ENST00000639257 ADAMTS8Q9UP79 889 aa23.66■■□□□ 1.38
SPIN3-220ENST00000639257 KDM3BQ7LBC6 1761 aa23.65■■□□□ 1.38
SPIN3-220ENST00000639257 KCNQ3O43525 872 aa23.65■■□□□ 1.38
SPIN3-220ENST00000639257 TRAPPC3LQ5T215 181 aa23.65■■□□□ 1.38
SPIN3-220ENST00000639257 ARHGEF1Q92888 912 aaKnown RBP23.65■■□□□ 1.38
SPIN3-220ENST00000639257 FHDC1Q9C0D6 1143 aaPredicted RBP23.65■■□□□ 1.38
SPIN3-220ENST00000639257 MSH5O43196 834 aa23.64■■□□□ 1.37
SPIN3-220ENST00000639257 TAF7Q15545 349 aaPredicted RBP23.64■■□□□ 1.37
SPIN3-220ENST00000639257 FMNL2Q96PY5 1086 aa23.64■■□□□ 1.37
SPIN3-220ENST00000639257 SYT17Q9BSW7 474 aa23.64■■□□□ 1.37
SPIN3-220ENST00000639257 CCDC87Q9NVE4 849 aa23.64■■□□□ 1.37
SPIN3-220ENST00000639257 SOS1Q07889 1333 aaPredicted RBP23.63■■□□□ 1.37
SPIN3-220ENST00000639257 TMPOP42166 694 aaKnown RBP23.63■■□□□ 1.37
SPIN3-220ENST00000639257 WDR43Q15061 677 aaKnown RBP eCLIP23.63■■□□□ 1.37
SPIN3-220ENST00000639257 MSL1Q68DK7 614 aa23.62■■□□□ 1.37
SPIN3-220ENST00000639257 RUNDC1Q96C34 613 aa23.62■■□□□ 1.37
SPIN3-220ENST00000639257 TEX13AQ9BXU3 409 aaPredicted RBP23.62■■□□□ 1.37
SPIN3-220ENST00000639257 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
SPIN3-220ENST00000639257 ZBTB1Q9Y2K1 713 aa23.61■■□□□ 1.37
SPIN3-220ENST00000639257 USP42Q9H9J4 1324 aaKnown RBP23.59■■□□□ 1.37
SPIN3-220ENST00000639257 GYS1P13807 737 aa23.59■■□□□ 1.37
SPIN3-220ENST00000639257 RIPK4P57078 832 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms