RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 GON4LQ3T8J9 2241 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 ZNF394Q53GI3 561 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 BAG4O95429 457 aaKnown RBP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 SCYL1Q96KG9 808 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 XRCC6P12956 609 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC152Q4G0S7 254 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 CATIPQ7Z7H3 387 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 SUN2Q9UH99 717 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 DNAJC21Q5F1R6 531 aaKnown RBP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 SYNE3Q6ZMZ3 975 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC80Q76M96 950 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 MS4A1P11836 297 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 UBXN4Q92575 508 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC159P0C7I6 412 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 ZNF280CQ8ND82 737 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 TRIM21P19474 475 aaKnown RBP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 USP5P45974 858 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 HNRNPUQ00839 825 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 ADCY2Q08462 1091 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 DDX10Q13206 875 aaKnown RBP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 FAM161AQ3B820 660 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 PABPN1Q86U42 306 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 MPHOSPH6Q99547 160 aaKnown RBP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 NOL7Q9UMY1 257 aaKnown RBP5.07□□□□□ -1.6
SCN3A-209ENST00000639244 ZNF652Q9Y2D9 606 aa5.07□□□□□ -1.6
SCN3A-209ENST00000639244 NASPP49321 788 aaPredicted RBP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 KRT72Q14CN4 511 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 SOGA3Q5TF21 947 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 TRIM7Q9C029 511 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 AKAP2Q9Y2D5 859 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 SFSWAPQ12872 951 aaKnown RBP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 KIAA1328Q86T90 577 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 CDK5RAP3Q96JB5 506 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 MAP3K20Q9NYL2 800 aaKnown RBP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 RABL2AQ9UBK7 228 aaPredicted RBP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 CEP104O60308 925 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 KRT38O76015 456 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 ABL2P42684 1182 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 RBM5P52756 815 aaKnown RBP eCLIP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 SYCP1Q15431 976 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 TXLNBQ8N3L3 684 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 TNPO1Q92973 898 aaKnown RBP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 RAD50Q92878 1312 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 FRAT2O75474 233 aaPredicted RBP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 LMNB1P20700 586 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 EIF2B5Q13144 721 aaKnown RBP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 DDX12PQ92771 950 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 CHPF2Q9P2E5 772 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 NRBP1Q9UHY1 535 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 SMC2O95347 1197 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC65Q8IXS2 484 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 RPS6KC1Q96S38 1066 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 ITM2BQ9Y287 266 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC15Q0P6D6 951 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 ANKRD18AQ8IVF6 992 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 DYTNA2CJ06 578 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 E2F6O75461 281 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 ANKRD13BQ86YJ7 626 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 RASSF8Q8NHQ8 419 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 TMCC3Q9ULS5 477 aa5.06□□□□□ -1.6
SCN3A-209ENST00000639244 G3BP2Q9UN86 482 aaKnown RBP5.06□□□□□ -1.6
SCN3A-209ENST00000639244 AK9Q5TCS8 1911 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 FAAH2Q6GMR7 532 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 TRIM6Q9C030 488 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC39Q9UFE4 941 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 NEBLO76041 1014 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 KRT222Q8N1A0 295 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 ZMAT2Q96NC0 199 aaKnown RBP5.05□□□□□ -1.6
SCN3A-209ENST00000639244 INO80BQ9C086 356 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-209ENST00000639244 TPPPO94811 219 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 DCTN1Q14203 1278 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 ACBD5Q5T8D3 534 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-209ENST00000639244 FILIP1Q7Z7B0 1213 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 TTC30AQ86WT1 665 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 BICD1Q96G01 975 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 NEUROD6Q96NK8 337 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 TRIM37O94972 964 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 EIF5P55010 431 aaKnown RBP5.05□□□□□ -1.6
SCN3A-209ENST00000639244 CCDC89Q8N998 374 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 OATP04181 439 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 MYLK4Q86YV6 388 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-209ENST00000639244 RUFY1Q96T51 708 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 ITGB1BP2Q9UKP3 347 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 UNCXA6NJT0 531 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 LARP1BQ659C4 914 aaKnown RBP5.05□□□□□ -1.6
SCN3A-209ENST00000639244 MORC1Q86VD1 984 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 IMPDH2P12268 514 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 PRPHP41219 470 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 GJA8P48165 433 aa5.05□□□□□ -1.6
SCN3A-209ENST00000639244 CDCA7Q9BWT1 371 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-209ENST00000639244 FSD2A1L4K1 749 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 PPM1EQ8WY54 764 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 RBM33Q96EV2 1170 aaKnown RBP5.04□□□□□ -1.6
SCN3A-209ENST00000639244 FAM81BQ96LP2 452 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 MAK16Q9BXY0 300 aaKnown RBP5.04□□□□□ -1.6
SCN3A-209ENST00000639244 DDX11L8A8MPP1 907 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 FAM76AQ8TAV0 307 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 LRRC27Q9C0I9 530 aa5.04□□□□□ -1.6
SCN3A-209ENST00000639244 DIAPH3Q9NSV4 1193 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms