RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 CPDO75976 1380 aa13.56□□□□□ -0.24
TARDBP-230ENST00000639083 CAMTA1Q9Y6Y1 1673 aa13.56□□□□□ -0.24
TARDBP-230ENST00000639083 TATP17735 454 aaPredicted RBP13.56□□□□□ -0.24
TARDBP-230ENST00000639083 MEIS3Q99687 375 aa13.56□□□□□ -0.24
TARDBP-230ENST00000639083 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
TARDBP-230ENST00000639083 CHD1LQ86WJ1 897 aa13.55□□□□□ -0.24
TARDBP-230ENST00000639083 GCC1Q96CN9 775 aa13.55□□□□□ -0.24
TARDBP-230ENST00000639083 COL18A1P39060 1754 aa13.55□□□□□ -0.24
TARDBP-230ENST00000639083 CCT4P50991 539 aaKnown RBP13.55□□□□□ -0.24
TARDBP-230ENST00000639083 ANKRD45Q5TZF3 282 aa13.55□□□□□ -0.24
TARDBP-230ENST00000639083 LMO7Q8WWI1 1683 aa13.54□□□□□ -0.24
TARDBP-230ENST00000639083 SEC24BO95487 1268 aa13.54□□□□□ -0.24
TARDBP-230ENST00000639083 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
TARDBP-230ENST00000639083 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
TARDBP-230ENST00000639083 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
TARDBP-230ENST00000639083 HOXB7P09629 217 aa13.53□□□□□ -0.24
TARDBP-230ENST00000639083 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
TARDBP-230ENST00000639083 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
TARDBP-230ENST00000639083 PHKG2P15735 406 aa13.52□□□□□ -0.24
TARDBP-230ENST00000639083 CEP85Q6P2H3 762 aa13.52□□□□□ -0.24
TARDBP-230ENST00000639083 ERICH6Q7L0X2 663 aa13.52□□□□□ -0.24
TARDBP-230ENST00000639083 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.24
TARDBP-230ENST00000639083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.243e-7■■□□□ 13.6
TARDBP-230ENST00000639083 MEGF6O75095 1541 aa13.52□□□□□ -0.24
TARDBP-230ENST00000639083 RPAP2Q8IXW5 612 aaPredicted RBP13.52□□□□□ -0.25
TARDBP-230ENST00000639083 CHPF2Q9P2E5 772 aa13.52□□□□□ -0.25
TARDBP-230ENST00000639083 OVOS2A0A0G2JMS6 1433 aa13.51□□□□□ -0.25
TARDBP-230ENST00000639083 CRYBG1Q9Y4K1 1723 aa13.51□□□□□ -0.25
TARDBP-230ENST00000639083 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
TARDBP-230ENST00000639083 ANP32EQ9BTT0 268 aa13.51□□□□□ -0.25
TARDBP-230ENST00000639083 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
TARDBP-230ENST00000639083 DCTPP1Q9H773 170 aa13.51□□□□□ -0.25
TARDBP-230ENST00000639083 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 PRAMEF22A3QJZ6 481 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 CYP27B1O15528 508 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 ANXA1P04083 346 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 FAM208AQ9UK61 1670 aaKnown RBP13.5□□□□□ -0.25
TARDBP-230ENST00000639083 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 SLC52A2Q9HAB3 445 aa13.5□□□□□ -0.25
TARDBP-230ENST00000639083 KDM3BQ7LBC6 1761 aa13.49□□□□□ -0.25
TARDBP-230ENST00000639083 ABCC6O95255 1503 aa13.49□□□□□ -0.25
TARDBP-230ENST00000639083 WDR17Q8IZU2 1322 aa13.49□□□□□ -0.25
TARDBP-230ENST00000639083 HEG1Q9ULI3 1381 aa13.49□□□□□ -0.25
TARDBP-230ENST00000639083 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-230ENST00000639083 GNAI2P04899 355 aa13.48□□□□□ -0.25
TARDBP-230ENST00000639083 ZNF790Q6PG37 636 aa13.48□□□□□ -0.25
TARDBP-230ENST00000639083 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
TARDBP-230ENST00000639083 DBF4Q9UBU7 674 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-230ENST00000639083 DCAF5Q96JK2 942 aa13.47□□□□□ -0.25
TARDBP-230ENST00000639083 PI4KAP2A4QPH2 592 aa13.47□□□□□ -0.25
TARDBP-230ENST00000639083 GNAI3P08754 354 aa13.47□□□□□ -0.25
TARDBP-230ENST00000639083 PI4KAP1Q8N8J0 262 aa13.47□□□□□ -0.25
TARDBP-230ENST00000639083 USP44Q9H0E7 712 aa13.47□□□□□ -0.25
TARDBP-230ENST00000639083 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
TARDBP-230ENST00000639083 PROSER3Q2NL68 480 aa13.46□□□□□ -0.25
TARDBP-230ENST00000639083 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.25
TARDBP-230ENST00000639083 EVA1CP58658 441 aa13.46□□□□□ -0.26
TARDBP-230ENST00000639083 CACNA1FO60840 1977 aa13.46□□□□□ -0.26
TARDBP-230ENST00000639083 COL5A2P05997 1499 aaPredicted RBP13.45□□□□□ -0.26
TARDBP-230ENST00000639083 ADAMTS7Q9UKP4 1686 aa13.45□□□□□ -0.26
TARDBP-230ENST00000639083 APBB1O00213 710 aa13.45□□□□□ -0.26
TARDBP-230ENST00000639083 HMMRO75330 724 aa13.45□□□□□ -0.26
TARDBP-230ENST00000639083 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
TARDBP-230ENST00000639083 DNAAF4Q8WXU2 420 aa13.45□□□□□ -0.26
TARDBP-230ENST00000639083 VIRMAQ69YN4 1812 aaKnown RBP13.45□□□□□ -0.26
TARDBP-230ENST00000639083 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
TARDBP-230ENST00000639083 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
TARDBP-230ENST00000639083 ZCRB1Q8TBF4 217 aaKnown RBP13.44□□□□□ -0.26
TARDBP-230ENST00000639083 CARD10Q9BWT7 1032 aa13.44□□□□□ -0.26
TARDBP-230ENST00000639083 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
TARDBP-230ENST00000639083 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
TARDBP-230ENST00000639083 LRRFIP2Q9Y608 721 aaKnown RBP13.44□□□□□ -0.26
TARDBP-230ENST00000639083 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-230ENST00000639083 CABP4P57796 275 aa13.43□□□□□ -0.26
TARDBP-230ENST00000639083 BMP2KLQ5H9B9 411 aa13.43□□□□□ -0.26
TARDBP-230ENST00000639083 BEND3Q5T5X7 828 aa13.43□□□□□ -0.26
TARDBP-230ENST00000639083 ZNF496Q96IT1 587 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-230ENST00000639083 UPF2Q9HAU5 1272 aaKnown RBP13.43□□□□□ -0.26
TARDBP-230ENST00000639083 SIPA1L3O60292 1781 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-230ENST00000639083 PXDNLA1KZ92 1463 aa13.43□□□□□ -0.26
TARDBP-230ENST00000639083 PNMA6EA0A0J9YXQ4 647 aa13.43□□□□□ -0.26
TARDBP-230ENST00000639083 UBTFL1P0CB47 393 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-230ENST00000639083 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
TARDBP-230ENST00000639083 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
TARDBP-230ENST00000639083 ADCY9O60503 1353 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 IL2RBP14784 551 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 ATP8B2P98198 1209 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 PDIA6Q15084 440 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 TTC5Q8N0Z6 440 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 HYPKQ9NX55 129 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 DDX21Q9NR30 783 aaKnown RBP eCLIP13.42□□□□□ -0.26
TARDBP-230ENST00000639083 MAP3K2Q9Y2U5 619 aa13.42□□□□□ -0.26
TARDBP-230ENST00000639083 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
TARDBP-230ENST00000639083 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms