RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 SMC5Q8IY18 1101 aa12.95□□□□□ -0.34
PAX6-236ENST00000638685 RNMTO43148 476 aaKnown RBP12.94□□□□□ -0.34
PAX6-236ENST00000638685 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
PAX6-236ENST00000638685 SEC24BO95487 1268 aa12.93□□□□□ -0.34
PAX6-236ENST00000638685 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
PAX6-236ENST00000638685 EIF4A1P60842 406 aaKnown RBP12.93□□□□□ -0.34
PAX6-236ENST00000638685 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
PAX6-236ENST00000638685 INTS3Q68E01 1043 aaKnown RBP12.93□□□□□ -0.34
PAX6-236ENST00000638685 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
PAX6-236ENST00000638685 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
PAX6-236ENST00000638685 NFKBIBQ15653 356 aa12.93□□□□□ -0.34
PAX6-236ENST00000638685 TBC1D32Q96NH3 1257 aa12.93□□□□□ -0.34
PAX6-236ENST00000638685 CPDO75976 1380 aa12.92□□□□□ -0.34
PAX6-236ENST00000638685 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
PAX6-236ENST00000638685 CSB-PGBD3P0DP91 1061 aa12.92□□□□□ -0.34
PAX6-236ENST00000638685 C1orf141Q5JVX7 400 aa12.92□□□□□ -0.34
PAX6-236ENST00000638685 MEIS3Q99687 375 aa12.92□□□□□ -0.34
PAX6-236ENST00000638685 BCL11AQ9H165 835 aa12.92□□□□□ -0.34
PAX6-236ENST00000638685 PTPRCP08575 1304 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 TEFQ10587 303 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 FLIIQ13045 1269 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 SLC4A10Q6U841 1118 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 PHAXQ9H814 394 aaKnown RBP12.91□□□□□ -0.34
PAX6-236ENST00000638685 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 KDM6AO15550 1401 aaPredicted RBP12.91□□□□□ -0.34
PAX6-236ENST00000638685 ANXA1P04083 346 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 EIF2S2P20042 333 aaKnown RBP12.91□□□□□ -0.34
PAX6-236ENST00000638685 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
PAX6-236ENST00000638685 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
PAX6-236ENST00000638685 NUCB1Q02818 461 aa12.9□□□□□ -0.34
PAX6-236ENST00000638685 CCDC30Q5VVM6 783 aa12.9□□□□□ -0.34
PAX6-236ENST00000638685 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
PAX6-236ENST00000638685 CYP27B1O15528 508 aa12.89□□□□□ -0.35
PAX6-236ENST00000638685 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
PAX6-236ENST00000638685 GCC1Q96CN9 775 aa12.89□□□□□ -0.35
PAX6-236ENST00000638685 PRDM11Q9NQV5 511 aa12.89□□□□□ -0.35
PAX6-236ENST00000638685 STK31Q9BXU1 1019 aa12.89□□□□□ -0.35
PAX6-236ENST00000638685 PHKG2P15735 406 aa12.88□□□□□ -0.35
PAX6-236ENST00000638685 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
PAX6-236ENST00000638685 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
PAX6-236ENST00000638685 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
PAX6-236ENST00000638685 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
PAX6-236ENST00000638685 CHPF2Q9P2E5 772 aa12.87□□□□□ -0.35
PAX6-236ENST00000638685 COL5A2P05997 1499 aaPredicted RBP12.87□□□□□ -0.35
PAX6-236ENST00000638685 ABCC6O95255 1503 aa12.87□□□□□ -0.35
PAX6-236ENST00000638685 PKD1L3Q7Z443 1732 aa12.87□□□□□ -0.35
PAX6-236ENST00000638685 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
PAX6-236ENST00000638685 PROSER3Q2NL68 480 aa12.86□□□□□ -0.35
PAX6-236ENST00000638685 NFATC2IPQ8NCF5 419 aa12.86□□□□□ -0.35
PAX6-236ENST00000638685 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
PAX6-236ENST00000638685 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
PAX6-236ENST00000638685 WDR17Q8IZU2 1322 aa12.86□□□□□ -0.35
PAX6-236ENST00000638685 CEP85Q6P2H3 762 aa12.86□□□□□ -0.35
PAX6-236ENST00000638685 GIGYF1O75420 1035 aaPredicted RBP12.85□□□□□ -0.35
PAX6-236ENST00000638685 GSE1Q14687 1217 aa12.85□□□□□ -0.35
PAX6-236ENST00000638685 ANKRD45Q5TZF3 282 aa12.85□□□□□ -0.35
PAX6-236ENST00000638685 C22orf23Q9BZE7 217 aa12.85□□□□□ -0.35
PAX6-236ENST00000638685 ROBO1Q9Y6N7 1651 aa12.85□□□□□ -0.35
PAX6-236ENST00000638685 C5P01031 1676 aa12.85□□□□□ -0.35
PAX6-236ENST00000638685 LARP1Q6PKG0 1096 aaKnown RBP12.85□□□□□ -0.35
PAX6-236ENST00000638685 STRN4Q9NRL3 753 aa12.85□□□□□ -0.35
PAX6-236ENST00000638685 TOM1L2Q6ZVM7 507 aa12.84□□□□□ -0.35
PAX6-236ENST00000638685 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
PAX6-236ENST00000638685 SLC52A2Q9HAB3 445 aa12.84□□□□□ -0.35
PAX6-236ENST00000638685 SPG7Q9UQ90 795 aa12.84□□□□□ -0.35
PAX6-236ENST00000638685 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
PAX6-236ENST00000638685 SOS1Q07889 1333 aaPredicted RBP12.84□□□□□ -0.35
PAX6-236ENST00000638685 BMP2KLQ5H9B9 411 aa12.84□□□□□ -0.35
PAX6-236ENST00000638685 IFNL2Q8IZJ0 200 aa12.84□□□□□ -0.35
PAX6-236ENST00000638685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
PAX6-236ENST00000638685 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
PAX6-236ENST00000638685 LTBP4Q8N2S1 1624 aa12.83□□□□□ -0.36
PAX6-236ENST00000638685 SHANK3Q9BYB0 1731 aa12.83□□□□□ -0.36
PAX6-236ENST00000638685 CCT4P50991 539 aaKnown RBP12.83□□□□□ -0.36
PAX6-236ENST00000638685 ZNF790Q6PG37 636 aa12.83□□□□□ -0.36
PAX6-236ENST00000638685 HOXB7P09629 217 aa12.82□□□□□ -0.36
PAX6-236ENST00000638685 MFAP1P55081 439 aaKnown RBP12.82□□□□□ -0.36
PAX6-236ENST00000638685 TBC1D2Q9BYX2 928 aa12.82□□□□□ -0.36
PAX6-236ENST00000638685 DCTPP1Q9H773 170 aa12.82□□□□□ -0.36
PAX6-236ENST00000638685 PI4KAP2A4QPH2 592 aa12.81□□□□□ -0.36
PAX6-236ENST00000638685 FRAT2O75474 233 aaPredicted RBP12.81□□□□□ -0.36
PAX6-236ENST00000638685 C16orf71Q8IYS4 520 aaPredicted RBP12.81□□□□□ -0.36
PAX6-236ENST00000638685 PI4KAP1Q8N8J0 262 aa12.81□□□□□ -0.36
PAX6-236ENST00000638685 USP44Q9H0E7 712 aa12.81□□□□□ -0.36
PAX6-236ENST00000638685 ZNF496Q96IT1 587 aaPredicted RBP12.81□□□□□ -0.36
PAX6-236ENST00000638685 ADCY9O60503 1353 aa12.81□□□□□ -0.36
PAX6-236ENST00000638685 PARP4Q9UKK3 1724 aaKnown RBP12.8□□□□□ -0.36
PAX6-236ENST00000638685 APBB1O00213 710 aa12.8□□□□□ -0.36
PAX6-236ENST00000638685 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
PAX6-236ENST00000638685 PDIA6Q15084 440 aa12.8□□□□□ -0.36
PAX6-236ENST00000638685 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
PAX6-236ENST00000638685 ANTXR1Q9H6X2 564 aa12.8□□□□□ -0.36
PAX6-236ENST00000638685 MRC1P22897 1456 aa12.8□□□□□ -0.36
PAX6-236ENST00000638685 PNMA6EA0A0J9YXQ4 647 aa12.8□□□□□ -0.36
PAX6-236ENST00000638685 PIP4K2AP48426 406 aaPredicted RBP12.8□□□□□ -0.36
PAX6-236ENST00000638685 RPAP2Q8IXW5 612 aaPredicted RBP12.8□□□□□ -0.36
PAX6-236ENST00000638685 DCAF5Q96JK2 942 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms