RNA–Protein interactions for RNA: ENST00000638605.1

ALK-206, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 1 (best)

Gene ALK, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-206ENST00000638605 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
ALK-206ENST00000638605 SLC52A2Q9HAB3 445 aa16.01■□□□□ 0.15
ALK-206ENST00000638605 PPP4R2Q9NY27 417 aa16.01■□□□□ 0.15
ALK-206ENST00000638605 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
ALK-206ENST00000638605 KDM3BQ7LBC6 1761 aa16.01■□□□□ 0.15
ALK-206ENST00000638605 KCNQ3O43525 872 aa16■□□□□ 0.15
ALK-206ENST00000638605 ZKSCAN2Q63HK3 967 aa16■□□□□ 0.15
ALK-206ENST00000638605 UNC5CLQ8IV45 518 aa16■□□□□ 0.15
ALK-206ENST00000638605 NFATC2IPQ8NCF5 419 aa16■□□□□ 0.15
ALK-206ENST00000638605 PANK1Q8TE04 598 aa16■□□□□ 0.15
ALK-206ENST00000638605 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
ALK-206ENST00000638605 NOB1Q9ULX3 412 aaKnown RBP16■□□□□ 0.15
ALK-206ENST00000638605 TNNQ9UQP3 1299 aa16■□□□□ 0.15
ALK-206ENST00000638605 DISP2A7MBM2 1401 aa16■□□□□ 0.15
ALK-206ENST00000638605 SIPA1L3O60292 1781 aaPredicted RBP16■□□□□ 0.15
ALK-206ENST00000638605 SPATA31A5Q5VU36 1347 aa15.99■□□□□ 0.15
ALK-206ENST00000638605 SPATA31A7Q8IWB4 1347 aa15.99■□□□□ 0.15
ALK-206ENST00000638605 WNK3Q9BYP7 1800 aa15.99■□□□□ 0.15
ALK-206ENST00000638605 PRKCSHP14314 528 aaPredicted RBP15.99■□□□□ 0.15
ALK-206ENST00000638605 CABP4P57796 275 aa15.99■□□□□ 0.15
ALK-206ENST00000638605 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
ALK-206ENST00000638605 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
ALK-206ENST00000638605 PDE3AQ14432 1141 aa15.98■□□□□ 0.15
ALK-206ENST00000638605 FTSJ3Q8IY81 847 aaKnown RBP15.98■□□□□ 0.15
ALK-206ENST00000638605 NECTIN2Q92692 538 aa15.98■□□□□ 0.15
ALK-206ENST00000638605 BCL9LQ86UU0 1499 aa15.98■□□□□ 0.15
ALK-206ENST00000638605 EXOC5O00471 708 aa15.98■□□□□ 0.15
ALK-206ENST00000638605 B4GALNT3Q6L9W6 998 aa15.98■□□□□ 0.15
ALK-206ENST00000638605 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
ALK-206ENST00000638605 MRC1P22897 1456 aa15.97■□□□□ 0.15
ALK-206ENST00000638605 IPO8O15397 1037 aaKnown RBP15.97■□□□□ 0.15
ALK-206ENST00000638605 RLBP1P12271 317 aa15.97■□□□□ 0.15
ALK-206ENST00000638605 TRIM27P14373 513 aa15.97■□□□□ 0.15
ALK-206ENST00000638605 SLC39A6Q13433 755 aa15.97■□□□□ 0.15
ALK-206ENST00000638605 ATF7IPQ6VMQ6 1270 aa15.97■□□□□ 0.15
ALK-206ENST00000638605 USP21Q9UK80 565 aa15.97■□□□□ 0.15
ALK-206ENST00000638605 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
ALK-206ENST00000638605 FNBP4Q8N3X1 1017 aaPredicted RBP15.96■□□□□ 0.15
ALK-206ENST00000638605 CDCA7Q9BWT1 371 aaPredicted RBP15.96■□□□□ 0.15
ALK-206ENST00000638605 NKX1-1Q15270 411 aaPredicted RBP15.95■□□□□ 0.14
ALK-206ENST00000638605 DZIP1LQ8IYY4 767 aaKnown RBP15.95■□□□□ 0.14
ALK-206ENST00000638605 TNS2Q63HR2 1409 aa15.95■□□□□ 0.14
ALK-206ENST00000638605 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
ALK-206ENST00000638605 VPS72Q15906 364 aa15.95■□□□□ 0.14
ALK-206ENST00000638605 DDB1Q16531 1140 aa15.95■□□□□ 0.14
ALK-206ENST00000638605 ZNF790Q6PG37 636 aa15.95■□□□□ 0.14
ALK-206ENST00000638605 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
ALK-206ENST00000638605 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
ALK-206ENST00000638605 ERVV-2B6SEH9 535 aa15.94■□□□□ 0.14
ALK-206ENST00000638605 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
ALK-206ENST00000638605 MS4A1P11836 297 aa15.94■□□□□ 0.14
ALK-206ENST00000638605 EIF2S2P20042 333 aaKnown RBP15.94■□□□□ 0.14
ALK-206ENST00000638605 FAM98CQ17RN3 349 aaKnown RBP15.94■□□□□ 0.14
ALK-206ENST00000638605 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
ALK-206ENST00000638605 CCDC30Q5VVM6 783 aa15.94■□□□□ 0.14
ALK-206ENST00000638605 TTC5Q8N0Z6 440 aa15.94■□□□□ 0.14
ALK-206ENST00000638605 AFF2P51816 1311 aa15.93■□□□□ 0.14
ALK-206ENST00000638605 SOS1Q07889 1333 aaPredicted RBP15.93■□□□□ 0.14
ALK-206ENST00000638605 A0A0G2JS52 829 aa15.93■□□□□ 0.14
ALK-206ENST00000638605 BARGINQ6ZT62 677 aa15.92■□□□□ 0.14
ALK-206ENST00000638605 TOGARAM1Q9Y4F4 1720 aa15.92■□□□□ 0.14
ALK-206ENST00000638605 KAT6BQ8WYB5 2073 aa15.92■□□□□ 0.14
ALK-206ENST00000638605 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.91■□□□□ 0.14
ALK-206ENST00000638605 HOXB7P09629 217 aa15.91■□□□□ 0.14
ALK-206ENST00000638605 ITPRIPQ8IWB1 547 aa15.91■□□□□ 0.14
ALK-206ENST00000638605 TMOD3Q9NYL9 352 aa15.91■□□□□ 0.14
ALK-206ENST00000638605 PRAMEF22A3QJZ6 481 aa15.9■□□□□ 0.14
ALK-206ENST00000638605 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
ALK-206ENST00000638605 MVPQ14764 893 aaKnown RBP15.9■□□□□ 0.14
ALK-206ENST00000638605 ARHGAP45Q92619 1136 aa15.9■□□□□ 0.14
ALK-206ENST00000638605 TMEM57Q8N5G2 664 aa15.9■□□□□ 0.14
ALK-206ENST00000638605 ZNF496Q96IT1 587 aaPredicted RBP15.9■□□□□ 0.14
ALK-206ENST00000638605 API5Q9BZZ5 524 aaKnown RBP15.9■□□□□ 0.14
ALK-206ENST00000638605 G2E3Q7L622 706 aa15.89■□□□□ 0.13
ALK-206ENST00000638605 SYTL4Q96C24 671 aaPredicted RBP15.89■□□□□ 0.13
ALK-206ENST00000638605 HEG1Q9ULI3 1381 aa15.89■□□□□ 0.13
ALK-206ENST00000638605 FMNL2Q96PY5 1086 aa15.88■□□□□ 0.13
ALK-206ENST00000638605 CHPF2Q9P2E5 772 aa15.88■□□□□ 0.13
ALK-206ENST00000638605 PTPRCP08575 1304 aa15.88■□□□□ 0.13
ALK-206ENST00000638605 CHMP4AQ9BY43 222 aa15.87■□□□□ 0.13
ALK-206ENST00000638605 C5P01031 1676 aa15.87■□□□□ 0.13
ALK-206ENST00000638605 ITGB4P16144 1822 aa15.87■□□□□ 0.13
ALK-206ENST00000638605 FLIIQ13045 1269 aa15.87■□□□□ 0.13
ALK-206ENST00000638605 MARCH10Q8NA82 808 aaPredicted RBP15.87■□□□□ 0.13
ALK-206ENST00000638605 PIGBQ92521 554 aa15.87■□□□□ 0.13
ALK-206ENST00000638605 ABCC4O15439 1325 aa15.86■□□□□ 0.13
ALK-206ENST00000638605 PTCD1O75127 700 aaKnown RBP15.86■□□□□ 0.13
ALK-206ENST00000638605 ANXA1P04083 346 aa15.86■□□□□ 0.13
ALK-206ENST00000638605 FKBP5Q13451 457 aaPredicted RBP15.86■□□□□ 0.13
ALK-206ENST00000638605 DOT1LQ8TEK3 1739 aa15.86■□□□□ 0.13
ALK-206ENST00000638605 CACNA1FO60840 1977 aa15.85■□□□□ 0.13
ALK-206ENST00000638605 PAPPAQ13219 1627 aa15.85■□□□□ 0.13
ALK-206ENST00000638605 SNRPA1P09661 255 aaKnown RBP15.85■□□□□ 0.13
ALK-206ENST00000638605 GJD4Q96KN9 370 aaPredicted RBP15.85■□□□□ 0.13
ALK-206ENST00000638605 DDX19BQ9UMR2 479 aa15.85■□□□□ 0.13
ALK-206ENST00000638605 RGS12O14924 1447 aa15.85■□□□□ 0.13
ALK-206ENST00000638605 PRIM1P49642 420 aaKnown RBP15.85■□□□□ 0.13
ALK-206ENST00000638605 ACSBG1Q96GR2 724 aa15.85■□□□□ 0.13
ALK-206ENST00000638605 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
ALK-206ENST00000638605 DBF4Q9UBU7 674 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms