RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	ATP10D	Q9P241	1426 aa		11.37	□□□□□ -0.59
SPTAN1-238	ENST00000637903	ATP6V1A	P38606	617 aa		11.37	□□□□□ -0.59
SPTAN1-238	ENST00000637903	ADCY9	O60503	1353 aa		11.37	□□□□□ -0.59
SPTAN1-238	ENST00000637903	IGSF1	Q8N6C5	1336 aa		11.36	□□□□□ -0.59
SPTAN1-238	ENST00000637903	ERVV-2	B6SEH9	535 aa		11.36	□□□□□ -0.59
SPTAN1-238	ENST00000637903	ZNF831	Q5JPB2	1677 aa		11.36	□□□□□ -0.59
SPTAN1-238	ENST00000637903	GNPAT	O15228	680 aa		11.35	□□□□□ -0.59
SPTAN1-238	ENST00000637903	RC3H1	Q5TC82	1133 aa	Known RBP	11.35	□□□□□ -0.59
SPTAN1-238	ENST00000637903	SLC4A9	Q96Q91	983 aa		11.35	□□□□□ -0.59
SPTAN1-238	ENST00000637903	KDR	P35968	1356 aa		11.35	□□□□□ -0.59
SPTAN1-238	ENST00000637903	KIF13B	Q9NQT8	1826 aa		11.35	□□□□□ -0.59
SPTAN1-238	ENST00000637903	HSP90AB1	P08238	724 aa	Known RBP	11.34	□□□□□ -0.59
SPTAN1-238	ENST00000637903	DCAF5	Q96JK2	942 aa		11.34	□□□□□ -0.59
SPTAN1-238	ENST00000637903	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	MMP10	P09238	476 aa		11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	TNNT2	P45379	298 aa	Predicted RBP	11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	TRAPPC3L	Q5T215	181 aa		11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	NLGN1	Q8N2Q7	840 aa		11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	PANK3	Q9H999	370 aa		11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	RTCB	Q9Y3I0	505 aa	Known RBP	11.33	□□□□□ -0.6
SPTAN1-238	ENST00000637903	ADRA2B	P18089	450 aa		11.32	□□□□□ -0.6
SPTAN1-238	ENST00000637903	TGFB2	P61812	414 aa		11.32	□□□□□ -0.6
SPTAN1-238	ENST00000637903	AMOT	Q4VCS5	1084 aa		11.32	□□□□□ -0.6
SPTAN1-238	ENST00000637903	MYH14	Q7Z406	1995 aa	Known RBP	11.32	□□□□□ -0.6
SPTAN1-238	ENST00000637903	CNTNAP4	Q9C0A0	1308 aa		11.32	□□□□□ -0.6
SPTAN1-238	ENST00000637903	COL5A3	P25940	1745 aa	Predicted RBP	11.32	□□□□□ -0.6
SPTAN1-238	ENST00000637903	KIAA1551	Q9HCM1	1747 aa		11.32	□□□□□ -0.6
SPTAN1-238	ENST00000637903	CIC	Q96RK0	1608 aa	Predicted RBP	11.31	□□□□□ -0.6
SPTAN1-238	ENST00000637903	RPS6KA4	O75676	772 aa		11.31	□□□□□ -0.6
SPTAN1-238	ENST00000637903	ARHGEF1	Q92888	912 aa	Known RBP	11.31	□□□□□ -0.6
SPTAN1-238	ENST00000637903	POLR3GL	Q9BT43	218 aa		11.31	□□□□□ -0.6
SPTAN1-238	ENST00000637903	KDM6A	O15550	1401 aa	Predicted RBP	11.31	□□□□□ -0.6
SPTAN1-238	ENST00000637903	PXDNL	A1KZ92	1463 aa		11.31	□□□□□ -0.6
SPTAN1-238	ENST00000637903	GYS1	P13807	737 aa		11.3	□□□□□ -0.6
SPTAN1-238	ENST00000637903	CABP4	P57796	275 aa		11.3	□□□□□ -0.6
SPTAN1-238	ENST00000637903	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.3	□□□□□ -0.6
SPTAN1-238	ENST00000637903	RBM42	Q9BTD8	480 aa	Known RBP	11.3	□□□□□ -0.6
SPTAN1-238	ENST00000637903	WWC3	Q9ULE0	1092 aa		11.3	□□□□□ -0.6
SPTAN1-238	ENST00000637903	KIF7	Q2M1P5	1343 aa		11.3	□□□□□ -0.6
SPTAN1-238	ENST00000637903	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.29	□□□□□ -0.6
SPTAN1-238	ENST00000637903	C10orf71	Q711Q0	1435 aa		11.29	□□□□□ -0.6
SPTAN1-238	ENST00000637903	HSPA6	P17066	643 aa		11.29	□□□□□ -0.6
SPTAN1-238	ENST00000637903	MTHFS	P49914	203 aa		11.29	□□□□□ -0.6
SPTAN1-238	ENST00000637903		A0A0G2JLW4	131 aa		11.28	□□□□□ -0.6
SPTAN1-238	ENST00000637903	KIF3C	O14782	793 aa		11.28	□□□□□ -0.6
SPTAN1-238	ENST00000637903	RFC4	P35249	363 aa		11.28	□□□□□ -0.6
SPTAN1-238	ENST00000637903	MORC1	Q86VD1	984 aa		11.28	□□□□□ -0.6
SPTAN1-238	ENST00000637903	AEBP1	Q8IUX7	1158 aa		11.28	□□□□□ -0.6
SPTAN1-238	ENST00000637903	NFATC2IP	Q8NCF5	419 aa		11.28	□□□□□ -0.6
SPTAN1-238	ENST00000637903	ZNF526	Q8TF50	670 aa	Predicted RBP	11.28	□□□□□ -0.6
SPTAN1-238	ENST00000637903	CCDC87	Q9NVE4	849 aa		11.28	□□□□□ -0.6
SPTAN1-238	ENST00000637903	BRCA1	P38398	1863 aa	Known RBP	11.27	□□□□□ -0.6
SPTAN1-238	ENST00000637903	C4A	P0C0L4	1744 aa		11.27	□□□□□ -0.61
SPTAN1-238	ENST00000637903	KCNA3	P22001	575 aa		11.27	□□□□□ -0.61
SPTAN1-238	ENST00000637903	IL13	P35225	146 aa		11.27	□□□□□ -0.61
SPTAN1-238	ENST00000637903	C1orf141	Q5JVX7	400 aa		11.27	□□□□□ -0.61
SPTAN1-238	ENST00000637903	PTCD1	O75127	700 aa	Known RBP	11.26	□□□□□ -0.61
SPTAN1-238	ENST00000637903	DPEP1	P16444	411 aa		11.26	□□□□□ -0.61
SPTAN1-238	ENST00000637903	CRKL	P46109	303 aa	Known RBP	11.26	□□□□□ -0.61
SPTAN1-238	ENST00000637903	IFFO2	Q5TF58	517 aa		11.26	□□□□□ -0.61
SPTAN1-238	ENST00000637903	SULT6B1	Q6IMI4	303 aa		11.26	□□□□□ -0.61
SPTAN1-238	ENST00000637903	BCS1L	Q9Y276	419 aa		11.26	□□□□□ -0.61
SPTAN1-238	ENST00000637903	PARP3	Q9Y6F1	533 aa		11.26	□□□□□ -0.61
SPTAN1-238	ENST00000637903	SCN11A	Q9UI33	1791 aa		11.26	□□□□□ -0.61
SPTAN1-238	ENST00000637903	KNSTRN	Q9Y448	316 aa		11.25	□□□□□ -0.61
SPTAN1-238	ENST00000637903	ARFGEF1	Q9Y6D6	1849 aa		11.25	□□□□□ -0.61
SPTAN1-238	ENST00000637903	TJP1	Q07157	1748 aa		11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	FCHSD2	O94868	740 aa		11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	FKBP8	Q14318	412 aa		11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	AKAP4	Q5JQC9	854 aa		11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	INTS5	Q6P9B9	1019 aa	Known RBP	11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	ARHGAP27	Q6ZUM4	889 aa		11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	USP42	Q9H9J4	1324 aa	Known RBP	11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	ADAMTS7	Q9UKP4	1686 aa		11.24	□□□□□ -0.61
SPTAN1-238	ENST00000637903	TM4SF1	P30408	202 aa		11.23	□□□□□ -0.61
SPTAN1-238	ENST00000637903	PIM2	Q9P1W9	311 aa		11.23	□□□□□ -0.61
SPTAN1-238	ENST00000637903	SRP68	Q9UHB9	627 aa	Known RBP	11.23	□□□□□ -0.61
SPTAN1-238	ENST00000637903	TOMM70	O94826	608 aa		11.22	□□□□□ -0.61
SPTAN1-238	ENST00000637903	DDR1	Q08345	913 aa		11.22	□□□□□ -0.61
SPTAN1-238	ENST00000637903	SLC52A2	Q9HAB3	445 aa		11.22	□□□□□ -0.61
SPTAN1-238	ENST00000637903	LGR6	Q9HBX8	967 aa		11.22	□□□□□ -0.61
SPTAN1-238	ENST00000637903	POLRMT	O00411	1230 aa	Known RBP	11.21	□□□□□ -0.61
SPTAN1-238	ENST00000637903	APLP1	P51693	650 aa		11.21	□□□□□ -0.61
SPTAN1-238	ENST00000637903	DNAJC10	Q8IXB1	793 aa		11.21	□□□□□ -0.61
SPTAN1-238	ENST00000637903	VIRMA	Q69YN4	1812 aa	Known RBP	11.21	□□□□□ -0.62
SPTAN1-238	ENST00000637903	MRC1	P22897	1456 aa		11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	SOS1	Q07889	1333 aa	Predicted RBP	11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	PER1	O15534	1290 aa	Predicted RBP	11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	RNMT	O43148	476 aa	Known RBP	11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	CYP19A1	P11511	503 aa	Predicted RBP	11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	DDX10	Q13206	875 aa	Known RBP	11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	DALRD3	Q5D0E6	543 aa	Known RBP	11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	C9orf131	Q5VYM1	1079 aa		11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	DNAJC5G	Q8N7S2	189 aa		11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	SBF1	O95248	1867 aa		11.2	□□□□□ -0.62
SPTAN1-238	ENST00000637903	ZPR1	O75312	459 aa		11.19	□□□□□ -0.62
SPTAN1-238	ENST00000637903	VSIG10	Q8N0Z9	540 aa		11.19	□□□□□ -0.62

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