RNA–Protein interactions for RNA: ENST00000637842.1

RBMS3-220, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 5

Gene RBMS3, Length 1,458 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-220ENST00000637842 C4BP0C0L5 1744 aa13.21□□□□□ -0.29
RBMS3-220ENST00000637842 GNPATO15228 680 aa13.2□□□□□ -0.3
RBMS3-220ENST00000637842 NME9Q86XW9 330 aa13.2□□□□□ -0.3
RBMS3-220ENST00000637842 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
RBMS3-220ENST00000637842 PARP3Q9Y6F1 533 aa13.2□□□□□ -0.3
RBMS3-220ENST00000637842 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
RBMS3-220ENST00000637842 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
RBMS3-220ENST00000637842 CNTNAP1P78357 1384 aa13.19□□□□□ -0.3
RBMS3-220ENST00000637842 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
RBMS3-220ENST00000637842 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
RBMS3-220ENST00000637842 TRAPPC3LQ5T215 181 aa13.18□□□□□ -0.3
RBMS3-220ENST00000637842 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
RBMS3-220ENST00000637842 RAPGEF4Q8WZA2 1011 aa13.18□□□□□ -0.3
RBMS3-220ENST00000637842 TAF1LQ8IZX4 1826 aa13.18□□□□□ -0.3
RBMS3-220ENST00000637842 PKD1L3Q7Z443 1732 aa13.17□□□□□ -0.3
RBMS3-220ENST00000637842 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
RBMS3-220ENST00000637842 SIK1P57059 783 aa13.17□□□□□ -0.3
RBMS3-220ENST00000637842 KIAA1551Q9HCM1 1747 aa13.17□□□□□ -0.3
RBMS3-220ENST00000637842 UBR3Q6ZT12 1888 aa13.17□□□□□ -0.3
RBMS3-220ENST00000637842 LMNB1P20700 586 aa13.16□□□□□ -0.3
RBMS3-220ENST00000637842 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
RBMS3-220ENST00000637842 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
RBMS3-220ENST00000637842 PCDH11XQ9BZA7 1347 aa13.16□□□□□ -0.3
RBMS3-220ENST00000637842 PCDH11YQ9BZA8 1340 aa13.16□□□□□ -0.3
RBMS3-220ENST00000637842 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
RBMS3-220ENST00000637842 VEGFBP49765 207 aa13.16□□□□□ -0.3
RBMS3-220ENST00000637842 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
RBMS3-220ENST00000637842 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
RBMS3-220ENST00000637842 MEGF6O75095 1541 aa13.15□□□□□ -0.3
RBMS3-220ENST00000637842 LTN1O94822 1766 aa13.15□□□□□ -0.3
RBMS3-220ENST00000637842 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.3
RBMS3-220ENST00000637842 POTECB2RU33 542 aa13.15□□□□□ -0.3
RBMS3-220ENST00000637842 HSPA8P11142 646 aaKnown RBP13.15□□□□□ -0.3
RBMS3-220ENST00000637842 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
RBMS3-220ENST00000637842 PIGBQ92521 554 aa13.15□□□□□ -0.3
RBMS3-220ENST00000637842 AMPHP49418 695 aa13.14□□□□□ -0.31
RBMS3-220ENST00000637842 ARFGEF1Q9Y6D6 1849 aa13.13□□□□□ -0.31
RBMS3-220ENST00000637842 HOXC9P31274 260 aa13.13□□□□□ -0.31
RBMS3-220ENST00000637842 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
RBMS3-220ENST00000637842 FAM208AQ9UK61 1670 aaKnown RBP13.13□□□□□ -0.31
RBMS3-220ENST00000637842 GYS1P13807 737 aa13.12□□□□□ -0.31
RBMS3-220ENST00000637842 RFC4P35249 363 aa13.12□□□□□ -0.31
RBMS3-220ENST00000637842 RASSF7Q02833 373 aa13.12□□□□□ -0.31
RBMS3-220ENST00000637842 ITPK1Q13572 414 aa13.12□□□□□ -0.31
RBMS3-220ENST00000637842 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
RBMS3-220ENST00000637842 HDGFL2Q7Z4V5 671 aaPredicted RBP13.12□□□□□ -0.31
RBMS3-220ENST00000637842 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
RBMS3-220ENST00000637842 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
RBMS3-220ENST00000637842 SBNO2Q9Y2G9 1366 aa13.12□□□□□ -0.31
RBMS3-220ENST00000637842 KDM6AO15550 1401 aaPredicted RBP13.12□□□□□ -0.31
RBMS3-220ENST00000637842 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
RBMS3-220ENST00000637842 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
RBMS3-220ENST00000637842 CHRNA5P30532 468 aa13.1□□□□□ -0.31
RBMS3-220ENST00000637842 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
RBMS3-220ENST00000637842 BRCA1P38398 1863 aaKnown RBP13.1□□□□□ -0.31
RBMS3-220ENST00000637842 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
RBMS3-220ENST00000637842 CD163L1Q9NR16 1453 aa13.1□□□□□ -0.31
RBMS3-220ENST00000637842 CYP27B1O15528 508 aa13.1□□□□□ -0.31
RBMS3-220ENST00000637842 SBF1O95248 1867 aa13.09□□□□□ -0.31
RBMS3-220ENST00000637842 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
RBMS3-220ENST00000637842 PASKQ96RG2 1323 aa13.08□□□□□ -0.31
RBMS3-220ENST00000637842 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
RBMS3-220ENST00000637842 DEFB115Q30KQ5 88 aa13.08□□□□□ -0.32
RBMS3-220ENST00000637842 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.32
RBMS3-220ENST00000637842 TMC1Q8TDI8 760 aa13.08□□□□□ -0.32
RBMS3-220ENST00000637842 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
RBMS3-220ENST00000637842 ASAP1Q9ULH1 1129 aa13.08□□□□□ -0.32
RBMS3-220ENST00000637842 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
RBMS3-220ENST00000637842 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
RBMS3-220ENST00000637842 BEGAINQ9BUH8 593 aa13.07□□□□□ -0.32
RBMS3-220ENST00000637842 PODXL2Q9NZ53 605 aa13.07□□□□□ -0.32
RBMS3-220ENST00000637842 PDE4DIPQ5VU43 2346 aa13.07□□□□□ -0.32
RBMS3-220ENST00000637842 EDC4Q6P2E9 1401 aaKnown RBP13.06□□□□□ -0.32
RBMS3-220ENST00000637842 COG3Q96JB2 828 aa13.06□□□□□ -0.32
RBMS3-220ENST00000637842 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
RBMS3-220ENST00000637842 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
RBMS3-220ENST00000637842 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
RBMS3-220ENST00000637842 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
RBMS3-220ENST00000637842 RASSF10A6NK89 507 aa13.04□□□□□ -0.32
RBMS3-220ENST00000637842 LDHDQ86WU2 507 aa13.04□□□□□ -0.32
RBMS3-220ENST00000637842 WDR33Q9C0J8 1336 aaKnown RBP13.04□□□□□ -0.32
RBMS3-220ENST00000637842 SMG6Q86US8 1419 aaKnown RBP13.04□□□□□ -0.32
RBMS3-220ENST00000637842 FBLN1P23142 703 aa13.04□□□□□ -0.32
RBMS3-220ENST00000637842 TTLL6Q8N841 843 aa13.04□□□□□ -0.32
RBMS3-220ENST00000637842 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
RBMS3-220ENST00000637842 ATG3Q9NT62 314 aa13.04□□□□□ -0.32
RBMS3-220ENST00000637842 RAB3GAP2Q9H2M9 1393 aa13.03□□□□□ -0.32
RBMS3-220ENST00000637842 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
RBMS3-220ENST00000637842 IQCA1LA6NCM1 817 aa13.03□□□□□ -0.32
RBMS3-220ENST00000637842 ITGBL1O95965 494 aaPredicted RBP13.03□□□□□ -0.32
RBMS3-220ENST00000637842 DDR1Q08345 913 aa13.03□□□□□ -0.32
RBMS3-220ENST00000637842 ERFEQ4G0M1 354 aa13.03□□□□□ -0.32
RBMS3-220ENST00000637842 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
RBMS3-220ENST00000637842 NFKBIEO00221 500 aa13.02□□□□□ -0.33
RBMS3-220ENST00000637842 FKBP8Q14318 412 aa13.02□□□□□ -0.33
RBMS3-220ENST00000637842 CNTNAP4Q9C0A0 1308 aa13.02□□□□□ -0.33
RBMS3-220ENST00000637842 RTL1A6NKG5 1358 aa13.02□□□□□ -0.33
RBMS3-220ENST00000637842 PRPF38BQ5VTL8 546 aaKnown RBP13.01□□□□□ -0.33
RBMS3-220ENST00000637842 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
RBMS3-220ENST00000637842 MCOLN1Q9GZU1 580 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms