RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 ATP6V1AP38606 617 aa16.75■□□□□ 0.27
CACNA1A-250ENST00000637809 SLC4A9Q96Q91 983 aa16.75■□□□□ 0.27
CACNA1A-250ENST00000637809 UBR3Q6ZT12 1888 aa16.75■□□□□ 0.27
CACNA1A-250ENST00000637809 POLR3GLQ9BT43 218 aa16.74■□□□□ 0.27
CACNA1A-250ENST00000637809 ERVV-2B6SEH9 535 aa16.72■□□□□ 0.27
CACNA1A-250ENST00000637809 PANK3Q9H999 370 aa16.72■□□□□ 0.27
CACNA1A-250ENST00000637809 WWC3Q9ULE0 1092 aa16.72■□□□□ 0.27
CACNA1A-250ENST00000637809 MMP10P09238 476 aa16.71■□□□□ 0.27
CACNA1A-250ENST00000637809 DCAF5Q96JK2 942 aa16.71■□□□□ 0.27
CACNA1A-250ENST00000637809 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-250ENST00000637809 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-250ENST00000637809 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-250ENST00000637809 EIF4G2P78344 907 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNA1A-250ENST00000637809 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-250ENST00000637809 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-250ENST00000637809 GPBP1L1Q9HC44 474 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-250ENST00000637809 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-250ENST00000637809 PXDNLA1KZ92 1463 aa16.68■□□□□ 0.26
CACNA1A-250ENST00000637809 TRAPPC3LQ5T215 181 aa16.68■□□□□ 0.26
CACNA1A-250ENST00000637809 AEBP1Q8IUX7 1158 aa16.68■□□□□ 0.26
CACNA1A-250ENST00000637809 PCGF6Q9BYE7 350 aa16.68■□□□□ 0.26
CACNA1A-250ENST00000637809 CNTNAP4Q9C0A0 1308 aa16.68■□□□□ 0.26
CACNA1A-250ENST00000637809 AMOTQ4VCS5 1084 aa16.67■□□□□ 0.26
CACNA1A-250ENST00000637809 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-250ENST00000637809 ZNF526Q8TF50 670 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-250ENST00000637809 ARHGEF1Q92888 912 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-250ENST00000637809 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-250ENST00000637809 GYS1P13807 737 aa16.66■□□□□ 0.26
CACNA1A-250ENST00000637809 ADRA2BP18089 450 aa16.66■□□□□ 0.26
CACNA1A-250ENST00000637809 C10orf71Q711Q0 1435 aa16.66■□□□□ 0.26
CACNA1A-250ENST00000637809 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
CACNA1A-250ENST00000637809 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
CACNA1A-250ENST00000637809 CABP4P57796 275 aa16.65■□□□□ 0.26
CACNA1A-250ENST00000637809 TGFB2P61812 414 aa16.65■□□□□ 0.26
CACNA1A-250ENST00000637809 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-250ENST00000637809 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
CACNA1A-250ENST00000637809 MTHFSP49914 203 aa16.64■□□□□ 0.25
CACNA1A-250ENST00000637809 MORC1Q86VD1 984 aa16.64■□□□□ 0.25
CACNA1A-250ENST00000637809 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
CACNA1A-250ENST00000637809 IL13P35225 146 aa16.63■□□□□ 0.25
CACNA1A-250ENST00000637809 KIF3CO14782 793 aa16.62■□□□□ 0.25
CACNA1A-250ENST00000637809 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-250ENST00000637809 RFC4P35249 363 aa16.62■□□□□ 0.25
CACNA1A-250ENST00000637809 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
CACNA1A-250ENST00000637809 SULT6B1Q6IMI4 303 aa16.62■□□□□ 0.25
CACNA1A-250ENST00000637809 NFATC2IPQ8NCF5 419 aa16.62■□□□□ 0.25
CACNA1A-250ENST00000637809 KIAA1551Q9HCM1 1747 aa16.62■□□□□ 0.25
CACNA1A-250ENST00000637809 DPEP1P16444 411 aa16.61■□□□□ 0.25
CACNA1A-250ENST00000637809 HSPA6P17066 643 aa16.61■□□□□ 0.25
CACNA1A-250ENST00000637809 COL5A3P25940 1745 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-250ENST00000637809 KCNA3P22001 575 aa16.6■□□□□ 0.25
CACNA1A-250ENST00000637809 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-250ENST00000637809 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-250ENST00000637809 CCDC87Q9NVE4 849 aa16.6■□□□□ 0.25
CACNA1A-250ENST00000637809 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
CACNA1A-250ENST00000637809 KIF13BQ9NQT8 1826 aa16.6■□□□□ 0.25
CACNA1A-250ENST00000637809 SRP68Q9UHB9 627 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-250ENST00000637809 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
CACNA1A-250ENST00000637809 INTS5Q6P9B9 1019 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-250ENST00000637809 KNSTRNQ9Y448 316 aa16.58■□□□□ 0.24
CACNA1A-250ENST00000637809 USP42Q9H9J4 1324 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-250ENST00000637809 C4AP0C0L4 1744 aa16.58■□□□□ 0.24
CACNA1A-250ENST00000637809 DDR1Q08345 913 aa16.57■□□□□ 0.24
CACNA1A-250ENST00000637809 FKBP8Q14318 412 aa16.57■□□□□ 0.24
CACNA1A-250ENST00000637809 FCHSD2O94868 740 aa16.56■□□□□ 0.24
CACNA1A-250ENST00000637809 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
CACNA1A-250ENST00000637809 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
CACNA1A-250ENST00000637809 MYH14Q7Z406 1995 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-250ENST00000637809 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
CACNA1A-250ENST00000637809 LGR6Q9HBX8 967 aa16.55■□□□□ 0.24
CACNA1A-250ENST00000637809 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-250ENST00000637809 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
CACNA1A-250ENST00000637809 POLRMTO00411 1230 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-250ENST00000637809 TM4SF1P30408 202 aa16.53■□□□□ 0.24
CACNA1A-250ENST00000637809 IFFO2Q5TF58 517 aa16.53■□□□□ 0.24
CACNA1A-250ENST00000637809 MRC1P22897 1456 aa16.53■□□□□ 0.24
CACNA1A-250ENST00000637809 TJP1Q07157 1748 aa16.53■□□□□ 0.24
CACNA1A-250ENST00000637809 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-250ENST00000637809 KIF7Q2M1P5 1343 aa16.52■□□□□ 0.24
CACNA1A-250ENST00000637809 RNMTO43148 476 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-250ENST00000637809 CYP19A1P11511 503 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-250ENST00000637809 PIM2Q9P1W9 311 aa16.52■□□□□ 0.24
CACNA1A-250ENST00000637809 ADAMTS7Q9UKP4 1686 aa16.51■□□□□ 0.23
CACNA1A-250ENST00000637809 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-250ENST00000637809 TOMM70O94826 608 aa16.51■□□□□ 0.23
CACNA1A-250ENST00000637809 HMOX1P09601 288 aa16.51■□□□□ 0.23
CACNA1A-250ENST00000637809 SLC39A6Q13433 755 aa16.51■□□□□ 0.23
CACNA1A-250ENST00000637809 C9orf131Q5VYM1 1079 aa16.51■□□□□ 0.23
CACNA1A-250ENST00000637809 CCER1Q8TC90 406 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-250ENST00000637809 NMRK2Q9NPI5 230 aa16.51■□□□□ 0.23
CACNA1A-250ENST00000637809 CHRNA5P30532 468 aa16.5■□□□□ 0.23
CACNA1A-250ENST00000637809 MTHFSDQ2M296 383 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-250ENST00000637809 DALRD3Q5D0E6 543 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-250ENST00000637809 USPL1Q5W0Q7 1092 aa16.5■□□□□ 0.23
CACNA1A-250ENST00000637809 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
CACNA1A-250ENST00000637809 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-250ENST00000637809 ZPR1O75312 459 aa16.48■□□□□ 0.23
CACNA1A-250ENST00000637809 BCL2L12Q9HB09 334 aa16.48■□□□□ 0.23
CACNA1A-250ENST00000637809 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
CACNA1A-250ENST00000637809 SCN11AQ9UI33 1791 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms