RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
SYNGAP1-224ENST00000637721 SULT6B1Q6IMI4 303 aa17.85■□□□□ 0.45
SYNGAP1-224ENST00000637721 NPC1L1Q9UHC9 1359 aa17.84■□□□□ 0.45
SYNGAP1-224ENST00000637721 GPR162Q16538 588 aa17.84■□□□□ 0.45
SYNGAP1-224ENST00000637721 LINC00116Q8NCU8 138 aa17.84■□□□□ 0.45
SYNGAP1-224ENST00000637721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.83■□□□□ 0.44
SYNGAP1-224ENST00000637721 MTHFSP49914 203 aa17.83■□□□□ 0.44
SYNGAP1-224ENST00000637721 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
SYNGAP1-224ENST00000637721 CD2APQ9Y5K6 639 aa17.83■□□□□ 0.44
SYNGAP1-224ENST00000637721 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
SYNGAP1-224ENST00000637721 CABP4P57796 275 aa17.82■□□□□ 0.44
SYNGAP1-224ENST00000637721 ITPK1Q13572 414 aa17.81■□□□□ 0.44
SYNGAP1-224ENST00000637721 MSL1Q68DK7 614 aa17.81■□□□□ 0.44
SYNGAP1-224ENST00000637721 GNPATO15228 680 aa17.8■□□□□ 0.44
SYNGAP1-224ENST00000637721 GRIN3BO60391 1043 aa17.8■□□□□ 0.44
SYNGAP1-224ENST00000637721 PHF14O94880 888 aa17.8■□□□□ 0.44
SYNGAP1-224ENST00000637721 AKAP4Q5JQC9 854 aa17.8■□□□□ 0.44
SYNGAP1-224ENST00000637721 RC3H1Q5TC82 1133 aaKnown RBP17.8■□□□□ 0.44
SYNGAP1-224ENST00000637721 NLGN2Q8NFZ4 835 aa17.8■□□□□ 0.44
SYNGAP1-224ENST00000637721 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
SYNGAP1-224ENST00000637721 COL5A3P25940 1745 aaPredicted RBP17.79■□□□□ 0.44
SYNGAP1-224ENST00000637721 ADRA2BP18089 450 aa17.79■□□□□ 0.44
SYNGAP1-224ENST00000637721 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
SYNGAP1-224ENST00000637721 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
SYNGAP1-224ENST00000637721 AMIGO3Q86WK7 504 aa17.78■□□□□ 0.44
SYNGAP1-224ENST00000637721 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
SYNGAP1-224ENST00000637721 RTCBQ9Y3I0 505 aaKnown RBP17.78■□□□□ 0.44
SYNGAP1-224ENST00000637721 CC2D1BQ5T0F9 858 aaKnown RBP17.77■□□□□ 0.44
SYNGAP1-224ENST00000637721 TRAPPC3LQ5T215 181 aa17.77■□□□□ 0.44
SYNGAP1-224ENST00000637721 CICQ96RK0 1608 aaPredicted RBP17.76■□□□□ 0.43
SYNGAP1-224ENST00000637721 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
SYNGAP1-224ENST00000637721 ZNF784Q8NCA9 323 aaPredicted RBP17.76■□□□□ 0.43
SYNGAP1-224ENST00000637721 NFATC2IPQ8NCF5 419 aa17.76■□□□□ 0.43
SYNGAP1-224ENST00000637721 SLC4A9Q96Q91 983 aa17.76■□□□□ 0.43
SYNGAP1-224ENST00000637721 NLGN1Q8N2Q7 840 aa17.74■□□□□ 0.43
SYNGAP1-224ENST00000637721 VIRMAQ69YN4 1812 aaKnown RBP17.73■□□□□ 0.43
SYNGAP1-224ENST00000637721 RPS6KA4O75676 772 aa17.73■□□□□ 0.43
SYNGAP1-224ENST00000637721 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
SYNGAP1-224ENST00000637721 MRC1P22897 1456 aa17.73■□□□□ 0.43
SYNGAP1-224ENST00000637721 MYH14Q7Z406 1995 aaKnown RBP17.72■□□□□ 0.43
SYNGAP1-224ENST00000637721 HMOX1P09601 288 aa17.72■□□□□ 0.43
SYNGAP1-224ENST00000637721 ADAMTS7Q9UKP4 1686 aa17.71■□□□□ 0.43
SYNGAP1-224ENST00000637721 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
SYNGAP1-224ENST00000637721 RFC4P35249 363 aa17.71■□□□□ 0.43
SYNGAP1-224ENST00000637721 RNMTO43148 476 aaKnown RBP17.7■□□□□ 0.42
SYNGAP1-224ENST00000637721 PTCD1O75127 700 aaKnown RBP17.7■□□□□ 0.42
SYNGAP1-224ENST00000637721 YBX3P16989 372 aaKnown RBP eCLIP17.7■□□□□ 0.42
SYNGAP1-224ENST00000637721 SMIM5Q71RC9 77 aa17.7■□□□□ 0.42
SYNGAP1-224ENST00000637721 ARHGEF1Q92888 912 aaKnown RBP17.7■□□□□ 0.42
SYNGAP1-224ENST00000637721 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
SYNGAP1-224ENST00000637721 TJP1Q07157 1748 aa17.69■□□□□ 0.42
SYNGAP1-224ENST00000637721 MMP10P09238 476 aa17.69■□□□□ 0.42
SYNGAP1-224ENST00000637721 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-224ENST00000637721 C4AP0C0L4 1744 aa17.68■□□□□ 0.42
SYNGAP1-224ENST00000637721 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
SYNGAP1-224ENST00000637721 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
SYNGAP1-224ENST00000637721 GYS1P13807 737 aa17.67■□□□□ 0.42
SYNGAP1-224ENST00000637721 CRKLP46109 303 aaKnown RBP17.67■□□□□ 0.42
SYNGAP1-224ENST00000637721 TGFB2P61812 414 aa17.67■□□□□ 0.42
SYNGAP1-224ENST00000637721 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
SYNGAP1-224ENST00000637721 LGR6Q9HBX8 967 aa17.67■□□□□ 0.42
SYNGAP1-224ENST00000637721 U2SURPO15042 1029 aaKnown RBP17.66■□□□□ 0.42
SYNGAP1-224ENST00000637721 CCDC87Q9NVE4 849 aa17.66■□□□□ 0.42
SYNGAP1-224ENST00000637721 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
SYNGAP1-224ENST00000637721 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.42
SYNGAP1-224ENST00000637721 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.41
SYNGAP1-224ENST00000637721 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
SYNGAP1-224ENST00000637721 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
SYNGAP1-224ENST00000637721 KCPQ6ZWJ8 1503 aa17.63■□□□□ 0.41
SYNGAP1-224ENST00000637721 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
SYNGAP1-224ENST00000637721 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
SYNGAP1-224ENST00000637721 INTS5Q6P9B9 1019 aaKnown RBP17.62■□□□□ 0.41
SYNGAP1-224ENST00000637721 DNAJC10Q8IXB1 793 aa17.62■□□□□ 0.41
SYNGAP1-224ENST00000637721 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
SYNGAP1-224ENST00000637721 PXDNLA1KZ92 1463 aa17.62■□□□□ 0.41
SYNGAP1-224ENST00000637721 ZPR1O75312 459 aa17.61■□□□□ 0.41
SYNGAP1-224ENST00000637721 CYP19A1P11511 503 aaPredicted RBP17.61■□□□□ 0.41
SYNGAP1-224ENST00000637721 TEFQ10587 303 aa17.61■□□□□ 0.41
SYNGAP1-224ENST00000637721 SLC39A6Q13433 755 aa17.61■□□□□ 0.41
SYNGAP1-224ENST00000637721 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
SYNGAP1-224ENST00000637721 KIAA1551Q9HCM1 1747 aa17.61■□□□□ 0.41
SYNGAP1-224ENST00000637721 GIGYF1O75420 1035 aaPredicted RBP17.6■□□□□ 0.41
SYNGAP1-224ENST00000637721 TEX13AQ9BXU3 409 aaPredicted RBP17.6■□□□□ 0.41
SYNGAP1-224ENST00000637721 SOS1Q07889 1333 aaPredicted RBP17.6■□□□□ 0.41
SYNGAP1-224ENST00000637721 SIPA1L3O60292 1781 aaPredicted RBP17.59■□□□□ 0.41
SYNGAP1-224ENST00000637721 STARD3NLO95772 234 aa17.59■□□□□ 0.41
SYNGAP1-224ENST00000637721 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
SYNGAP1-224ENST00000637721 C1QTNF8P60827 252 aa17.59■□□□□ 0.41
SYNGAP1-224ENST00000637721 N4BP2Q86UW6 1770 aaPredicted RBP17.58■□□□□ 0.41
SYNGAP1-224ENST00000637721 FKBP8Q14318 412 aa17.58■□□□□ 0.4
SYNGAP1-224ENST00000637721 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
SYNGAP1-224ENST00000637721 NARFQ9UHQ1 456 aa17.58■□□□□ 0.4
SYNGAP1-224ENST00000637721 ADCY9O60503 1353 aa17.57■□□□□ 0.4
SYNGAP1-224ENST00000637721 COL15A1P39059 1388 aa17.57■□□□□ 0.4
SYNGAP1-224ENST00000637721 CEMIPQ8WUJ3 1361 aa17.57■□□□□ 0.4
SYNGAP1-224ENST00000637721 BRCA1P38398 1863 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-224ENST00000637721 FCHSD2O94868 740 aa17.57■□□□□ 0.4
SYNGAP1-224ENST00000637721 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
SYNGAP1-224ENST00000637721 ZNF790Q6PG37 636 aa17.57■□□□□ 0.4
SYNGAP1-224ENST00000637721 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms