RNA–Protein interactions for RNA: ENST00000637475.1

CACNA1A-241, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-241ENST00000637475 PKP1Q13835 747 aa23.98■■□□□ 1.43
CACNA1A-241ENST00000637475 MED1Q15648 1581 aaPredicted RBP23.97■■□□□ 1.43
CACNA1A-241ENST00000637475 CUL4AQ13619 759 aa23.97■■□□□ 1.43
CACNA1A-241ENST00000637475 KLHL34Q8N239 644 aa23.97■■□□□ 1.43
CACNA1A-241ENST00000637475 SSH2Q76I76 1423 aa23.96■■□□□ 1.43
CACNA1A-241ENST00000637475 PRPF40AO75400 957 aaKnown RBP23.96■■□□□ 1.43
CACNA1A-241ENST00000637475 INTS4Q96HW7 963 aaKnown RBP23.96■■□□□ 1.43
CACNA1A-241ENST00000637475 DIP2AQ14689 1571 aa23.95■■□□□ 1.42
CACNA1A-241ENST00000637475 DYNC1I1O14576 645 aa23.95■■□□□ 1.42
CACNA1A-241ENST00000637475 ZGPATQ8N5A5 531 aaKnown RBP23.95■■□□□ 1.42
CACNA1A-241ENST00000637475 TMEM63CQ9P1W3 806 aa23.95■■□□□ 1.42
CACNA1A-241ENST00000637475 EPB41L2O43491 1005 aaKnown RBP23.94■■□□□ 1.42
CACNA1A-241ENST00000637475 BRD1O95696 1058 aa23.94■■□□□ 1.42
CACNA1A-241ENST00000637475 ANAPC15P60006 121 aa23.94■■□□□ 1.42
CACNA1A-241ENST00000637475 C16orf71Q8IYS4 520 aaPredicted RBP23.94■■□□□ 1.42
CACNA1A-241ENST00000637475 EMILIN1Q9Y6C2 1016 aa23.94■■□□□ 1.42
CACNA1A-241ENST00000637475 MSH6P52701 1360 aa23.93■■□□□ 1.42
CACNA1A-241ENST00000637475 CHL1O00533 1208 aa23.92■■□□□ 1.42
CACNA1A-241ENST00000637475 RGPD1P0DJD0 1748 aa23.92■■□□□ 1.42
CACNA1A-241ENST00000637475 NCLP19338 710 aaKnown RBP23.92■■□□□ 1.42
CACNA1A-241ENST00000637475 ELL2O00472 640 aaPredicted RBP23.92■■□□□ 1.42
CACNA1A-241ENST00000637475 OTUD7AQ8TE49 926 aaPredicted RBP23.92■■□□□ 1.42
CACNA1A-241ENST00000637475 NRXN3Q9Y4C0 1643 aa23.91■■□□□ 1.42
CACNA1A-241ENST00000637475 HMMRO75330 724 aa23.91■■□□□ 1.42
CACNA1A-241ENST00000637475 SALL3Q9BXA9 1300 aa23.91■■□□□ 1.42
CACNA1A-241ENST00000637475 ROBO1Q9Y6N7 1651 aa23.91■■□□□ 1.42
CACNA1A-241ENST00000637475 ITSN1Q15811 1721 aa23.91■■□□□ 1.42
CACNA1A-241ENST00000637475 N4BP2Q86UW6 1770 aaPredicted RBP23.9■■□□□ 1.42
CACNA1A-241ENST00000637475 PTPRUQ92729 1446 aa23.9■■□□□ 1.42
CACNA1A-241ENST00000637475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.9■■□□□ 1.42
CACNA1A-241ENST00000637475 ARHGEF10O15013 1369 aa23.9■■□□□ 1.42
CACNA1A-241ENST00000637475 SASS6Q6UVJ0 657 aa23.89■■□□□ 1.42
CACNA1A-241ENST00000637475 RBM27Q9P2N5 1060 aaKnown RBP23.89■■□□□ 1.42
CACNA1A-241ENST00000637475 R3HCC1Q9Y3T6 440 aaKnown RBP23.89■■□□□ 1.42
CACNA1A-241ENST00000637475 SYAP1Q96A49 352 aaPredicted RBP23.89■■□□□ 1.41
CACNA1A-241ENST00000637475 TMX3Q96JJ7 454 aa23.89■■□□□ 1.41
CACNA1A-241ENST00000637475 AMOTL2Q9Y2J4 779 aa23.88■■□□□ 1.41
CACNA1A-241ENST00000637475 PDE1AP54750 535 aa23.87■■□□□ 1.41
CACNA1A-241ENST00000637475 C14orf37Q86TY3 774 aa23.87■■□□□ 1.41
CACNA1A-241ENST00000637475 SYCE3A1L190 88 aa23.86■■□□□ 1.41
CACNA1A-241ENST00000637475 UVSSAQ2YD98 709 aa23.86■■□□□ 1.41
CACNA1A-241ENST00000637475 NALCNQ8IZF0 1738 aa23.86■■□□□ 1.41
CACNA1A-241ENST00000637475 TECPR2O15040 1411 aa23.86■■□□□ 1.41
CACNA1A-241ENST00000637475 UQCRHLA0A096LP55 91 aa23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 PHF14O94880 888 aa23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 UQCRHP07919 91 aa23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 FAM184AQ8NB25 1140 aa23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 SIRT1Q96EB6 747 aa23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 SLAIN2Q9P270 581 aa23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 FBLN1P23142 703 aa23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 XPCQ01831 940 aaPredicted RBP23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 TSPY26PQ9H489 355 aa23.85■■□□□ 1.41
CACNA1A-241ENST00000637475 CRB1P82279 1406 aa23.84■■□□□ 1.41
CACNA1A-241ENST00000637475 TMEM87AQ8NBN3 555 aa23.84■■□□□ 1.41
CACNA1A-241ENST00000637475 COG3Q96JB2 828 aa23.84■■□□□ 1.41
CACNA1A-241ENST00000637475 MEIS3Q99687 375 aa23.84■■□□□ 1.41
CACNA1A-241ENST00000637475 FAM83GA6ND36 823 aa23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 WASLO00401 505 aaPredicted RBP23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 SOCS7O14512 581 aa23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 MCCP23508 829 aa23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 NME9Q86XW9 330 aa23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 ESYT1Q9BSJ8 1104 aa23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 METP08581 1390 aa23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 CCT4P50991 539 aaKnown RBP23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 NSFL1CQ9UNZ2 370 aaKnown RBP23.83■■□□□ 1.41
CACNA1A-241ENST00000637475 AOX1Q06278 1338 aa23.82■■□□□ 1.4
CACNA1A-241ENST00000637475 SMARCA5O60264 1052 aaPredicted RBP23.82■■□□□ 1.4
CACNA1A-241ENST00000637475 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.82■■□□□ 1.4
CACNA1A-241ENST00000637475 XRN1Q8IZH2 1706 aaKnown RBP23.81■■□□□ 1.4
CACNA1A-241ENST00000637475 NEK4P51957 841 aa23.81■■□□□ 1.4
CACNA1A-241ENST00000637475 PLEKHG5O94827 1062 aa23.8■■□□□ 1.4
CACNA1A-241ENST00000637475 STAP2Q9UGK3 403 aa23.8■■□□□ 1.4
CACNA1A-241ENST00000637475 KIAA2012Q0VF49 1180 aa23.79■■□□□ 1.4
CACNA1A-241ENST00000637475 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
CACNA1A-241ENST00000637475 DCTN1Q14203 1278 aa23.78■■□□□ 1.4
CACNA1A-241ENST00000637475 SRCIN1Q9C0H9 1055 aa23.78■■□□□ 1.4
CACNA1A-241ENST00000637475 LRRC37A3O60309 1634 aa23.77■■□□□ 1.4
CACNA1A-241ENST00000637475 SMAP1Q8IYB5 467 aaPredicted RBP23.77■■□□□ 1.4
CACNA1A-241ENST00000637475 TOPAZ1Q8N9V7 1692 aa23.77■■□□□ 1.4
CACNA1A-241ENST00000637475 OVOS2A0A0J9YW53 1432 aa23.77■■□□□ 1.4
CACNA1A-241ENST00000637475 OVOS2Q6IE36 1432 aa23.77■■□□□ 1.4
CACNA1A-241ENST00000637475 FAM208AQ9UK61 1670 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 CACNA1FO60840 1977 aa23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 ATF3P18847 181 aa23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 PRIMPOLQ96LW4 560 aa23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 WDR33Q9C0J8 1336 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 GTF2F1P35269 517 aaKnown RBP eCLIP23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 CADPS2Q86UW7 1296 aa23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 PXDNLA1KZ92 1463 aa23.76■■□□□ 1.39
CACNA1A-241ENST00000637475 PHLPP1O60346 1717 aa23.75■■□□□ 1.39
CACNA1A-241ENST00000637475 LETM1O95202 739 aaPredicted RBP23.75■■□□□ 1.39
CACNA1A-241ENST00000637475 CHMLP26374 656 aa23.75■■□□□ 1.39
CACNA1A-241ENST00000637475 MYRIPQ8NFW9 859 aa23.75■■□□□ 1.39
CACNA1A-241ENST00000637475 FAM13BQ9NYF5 915 aa23.75■■□□□ 1.39
CACNA1A-241ENST00000637475 CCDC61Q9Y6R9 512 aa23.75■■□□□ 1.39
CACNA1A-241ENST00000637475 RBM10P98175 930 aaKnown RBP23.74■■□□□ 1.39
CACNA1A-241ENST00000637475 EIF4A2Q14240 407 aaKnown RBP23.74■■□□□ 1.39
CACNA1A-241ENST00000637475 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
CACNA1A-241ENST00000637475 RPAP1Q9BWH6 1393 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms