RNA–Protein interactions for RNA: ENST00000637383.1

SMARCA2-262, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-262	ENST00000637383	ITPK1	Q13572	414 aa		10.56	□□□□□ -0.72
SMARCA2-262	ENST00000637383	AMIGO3	Q86WK7	504 aa		10.56	□□□□□ -0.72
SMARCA2-262	ENST00000637383	FLAD1	Q8NFF5	587 aa		10.56	□□□□□ -0.72
SMARCA2-262	ENST00000637383	SLC4A2	P04920	1241 aa		10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	ATP6V1A	P38606	617 aa		10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	CABP4	P57796	275 aa		10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	CNGB1	Q14028	1251 aa	Predicted RBP	10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	C1orf141	Q5JVX7	400 aa		10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	SMIM5	Q71RC9	77 aa		10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	LINC00116	Q8NCU8	138 aa		10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	AK7	Q96M32	723 aa		10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	KDM6A	O15550	1401 aa	Predicted RBP	10.55	□□□□□ -0.72
SMARCA2-262	ENST00000637383	DIAPH1	O60610	1272 aa	Known RBP	10.54	□□□□□ -0.72
SMARCA2-262	ENST00000637383	HMOX1	P09601	288 aa		10.54	□□□□□ -0.72
SMARCA2-262	ENST00000637383	YY1	P25490	414 aa		10.54	□□□□□ -0.72
SMARCA2-262	ENST00000637383	MSL1	Q68DK7	614 aa		10.54	□□□□□ -0.72
SMARCA2-262	ENST00000637383	SLC4A9	Q96Q91	983 aa		10.54	□□□□□ -0.72
SMARCA2-262	ENST00000637383	ITGB4	P16144	1822 aa		10.54	□□□□□ -0.72
SMARCA2-262	ENST00000637383	QSER1	Q2KHR3	1735 aa		10.53	□□□□□ -0.72
SMARCA2-262	ENST00000637383	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.53	□□□□□ -0.72
SMARCA2-262	ENST00000637383	PHF14	O94880	888 aa		10.53	□□□□□ -0.72
SMARCA2-262	ENST00000637383	SSFA2	P28290	1259 aa		10.53	□□□□□ -0.72
SMARCA2-262	ENST00000637383	KLHL34	Q8N239	644 aa		10.53	□□□□□ -0.72
SMARCA2-262	ENST00000637383	NFATC2IP	Q8NCF5	419 aa		10.53	□□□□□ -0.72
SMARCA2-262	ENST00000637383	GNPAT	O15228	680 aa		10.52	□□□□□ -0.73
SMARCA2-262	ENST00000637383	AKAP4	Q5JQC9	854 aa		10.52	□□□□□ -0.73
SMARCA2-262	ENST00000637383	RBM42	Q9BTD8	480 aa	Known RBP	10.52	□□□□□ -0.73
SMARCA2-262	ENST00000637383	C5	P01031	1676 aa		10.52	□□□□□ -0.73
SMARCA2-262	ENST00000637383	TUBGCP6	Q96RT7	1819 aa		10.51	□□□□□ -0.73
SMARCA2-262	ENST00000637383	C4B	P0C0L5	1744 aa		10.51	□□□□□ -0.73
SMARCA2-262	ENST00000637383	NLGN2	Q8NFZ4	835 aa		10.51	□□□□□ -0.73
SMARCA2-262	ENST00000637383	LGR6	Q9HBX8	967 aa		10.51	□□□□□ -0.73
SMARCA2-262	ENST00000637383	PTCD1	O75127	700 aa	Known RBP	10.5	□□□□□ -0.73
SMARCA2-262	ENST00000637383	GPR162	Q16538	588 aa		10.5	□□□□□ -0.73
SMARCA2-262	ENST00000637383	MTHFSD	Q2M296	383 aa	Known RBP	10.5	□□□□□ -0.73
SMARCA2-262	ENST00000637383	RC3H1	Q5TC82	1133 aa	Known RBP	10.5	□□□□□ -0.73
SMARCA2-262	ENST00000637383	COL24A1	Q17RW2	1714 aa		10.5	□□□□□ -0.73
SMARCA2-262	ENST00000637383	TAF1L	Q8IZX4	1826 aa		10.49	□□□□□ -0.73
SMARCA2-262	ENST00000637383	U2SURP	O15042	1029 aa	Known RBP	10.49	□□□□□ -0.73
SMARCA2-262	ENST00000637383	RNMT	O43148	476 aa	Known RBP	10.49	□□□□□ -0.73
SMARCA2-262	ENST00000637383	SLC52A2	Q9HAB3	445 aa		10.49	□□□□□ -0.73
SMARCA2-262	ENST00000637383	RTCB	Q9Y3I0	505 aa	Known RBP	10.49	□□□□□ -0.73
SMARCA2-262	ENST00000637383	COL3A1	P02461	1466 aa	Predicted RBP	10.49	□□□□□ -0.73
SMARCA2-262	ENST00000637383	TRAPPC3L	Q5T215	181 aa		10.48	□□□□□ -0.73
SMARCA2-262	ENST00000637383	ARHGEF1	Q92888	912 aa	Known RBP	10.48	□□□□□ -0.73
SMARCA2-262	ENST00000637383	CD2AP	Q9Y5K6	639 aa		10.48	□□□□□ -0.73
SMARCA2-262	ENST00000637383	UTRN	P46939	3433 aa		10.48	□□□□□ -0.73
SMARCA2-262	ENST00000637383	CNTNAP4	Q9C0A0	1308 aa		10.48	□□□□□ -0.73
SMARCA2-262	ENST00000637383	RPS6KA4	O75676	772 aa		10.47	□□□□□ -0.73
SMARCA2-262	ENST00000637383	CRKL	P46109	303 aa	Known RBP	10.47	□□□□□ -0.73
SMARCA2-262	ENST00000637383	PELP1	Q8IZL8	1130 aa	Known RBP	10.47	□□□□□ -0.73
SMARCA2-262	ENST00000637383	CFAP53	Q96M91	514 aa		10.47	□□□□□ -0.73
SMARCA2-262	ENST00000637383	PPP2R1A	P30153	589 aa		10.46	□□□□□ -0.73
SMARCA2-262	ENST00000637383	SLC39A6	Q13433	755 aa		10.46	□□□□□ -0.73
SMARCA2-262	ENST00000637383	UBR3	Q6ZT12	1888 aa		10.46	□□□□□ -0.74
SMARCA2-262	ENST00000637383	MMP10	P09238	476 aa		10.45	□□□□□ -0.74
SMARCA2-262	ENST00000637383	YBX3	P16989	372 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
SMARCA2-262	ENST00000637383	RFC4	P35249	363 aa		10.45	□□□□□ -0.74
SMARCA2-262	ENST00000637383	NLGN1	Q8N2Q7	840 aa		10.45	□□□□□ -0.74
SMARCA2-262	ENST00000637383	GAS2L2	Q8NHY3	880 aa		10.45	□□□□□ -0.74
SMARCA2-262	ENST00000637383	RSPH6A	Q9H0K4	717 aa		10.45	□□□□□ -0.74
SMARCA2-262	ENST00000637383	NUDC	Q9Y266	331 aa		10.45	□□□□□ -0.74
SMARCA2-262	ENST00000637383	ZNF831	Q5JPB2	1677 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	MRC1	P22897	1456 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	GNAT3	A8MTJ3	354 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	GRIN3B	O60391	1043 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	GYS1	P13807	737 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	PRKAR2B	P31323	418 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	INTS5	Q6P9B9	1019 aa	Known RBP	10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	DNAJC10	Q8IXB1	793 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	IL17RE	Q8NFR9	667 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	PHACTR3	Q96KR7	559 aa		10.44	□□□□□ -0.74
SMARCA2-262	ENST00000637383	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.43	□□□□□ -0.74
SMARCA2-262	ENST00000637383	CYP19A1	P11511	503 aa	Predicted RBP	10.43	□□□□□ -0.74
SMARCA2-262	ENST00000637383	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
SMARCA2-262	ENST00000637383	CCDC87	Q9NVE4	849 aa		10.43	□□□□□ -0.74
SMARCA2-262	ENST00000637383	GOLGB1	Q14789	3259 aa	Known RBP	10.43	□□□□□ -0.74
SMARCA2-262	ENST00000637383	SCN11A	Q9UI33	1791 aa		10.42	□□□□□ -0.74
SMARCA2-262	ENST00000637383	FCHSD2	O94868	740 aa		10.42	□□□□□ -0.74
SMARCA2-262	ENST00000637383	VSIG10	Q8N0Z9	540 aa		10.42	□□□□□ -0.74
SMARCA2-262	ENST00000637383	SRP68	Q9UHB9	627 aa	Known RBP	10.42	□□□□□ -0.74
SMARCA2-262	ENST00000637383	MYH14	Q7Z406	1995 aa	Known RBP	10.41	□□□□□ -0.74
SMARCA2-262	ENST00000637383	TEF	Q10587	303 aa		10.41	□□□□□ -0.74
SMARCA2-262	ENST00000637383	TTC5	Q8N0Z6	440 aa		10.41	□□□□□ -0.74
SMARCA2-262	ENST00000637383	ADAMTS7	Q9UKP4	1686 aa		10.41	□□□□□ -0.74
SMARCA2-262	ENST00000637383	CEMIP	Q8WUJ3	1361 aa		10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	SOS1	Q07889	1333 aa	Predicted RBP	10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	USP42	Q9H9J4	1324 aa	Known RBP	10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	KCP	Q6ZWJ8	1503 aa		10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	MYCN	P04198	464 aa	Predicted RBP	10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	FKBP8	Q14318	412 aa		10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	ZNF790	Q6PG37	636 aa		10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	ZNF496	Q96IT1	587 aa	Predicted RBP	10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	PARP3	Q9Y6F1	533 aa		10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	COL5A3	P25940	1745 aa	Predicted RBP	10.4	□□□□□ -0.74
SMARCA2-262	ENST00000637383	ZPR1	O75312	459 aa		10.39	□□□□□ -0.75
SMARCA2-262	ENST00000637383	STARD3NL	O95772	234 aa		10.39	□□□□□ -0.75
SMARCA2-262	ENST00000637383	TGFB2	P61812	414 aa		10.39	□□□□□ -0.75
SMARCA2-262	ENST00000637383	WWC3	Q9ULE0	1092 aa		10.39	□□□□□ -0.75

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