RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 UPF2Q9HAU5 1272 aaKnown RBP21.32■■□□□ 1
CHRNA7-227ENST00000637350 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
CHRNA7-227ENST00000637350 CSB-PGBD3P0DP91 1061 aa21.32■■□□□ 1
CHRNA7-227ENST00000637350 TAF7Q15545 349 aaPredicted RBP21.32■■□□□ 1
CHRNA7-227ENST00000637350 MFAP1P55081 439 aaKnown RBP21.31■■□□□ 1
CHRNA7-227ENST00000637350 PRDM11Q9NQV5 511 aa21.31■■□□□ 1
CHRNA7-227ENST00000637350 ABCA3Q99758 1704 aa21.3■■□□□ 1
CHRNA7-227ENST00000637350 C1orf141Q5JVX7 400 aa21.3■■□□□ 1
CHRNA7-227ENST00000637350 ATP10DQ9P241 1426 aa21.3■■□□□ 1
CHRNA7-227ENST00000637350 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
CHRNA7-227ENST00000637350 ROBO1Q9Y6N7 1651 aa21.29■■□□□ 1
CHRNA7-227ENST00000637350 ANKRD45Q5TZF3 282 aa21.28■■□□□ 1
CHRNA7-227ENST00000637350 GCC1Q96CN9 775 aa21.28■■□□□ 1
CHRNA7-227ENST00000637350 LGR6Q9HBX8 967 aa21.28■■□□□ 1
CHRNA7-227ENST00000637350 TBC1D2Q9BYX2 928 aa21.27■■□□□ 1
CHRNA7-227ENST00000637350 CHMP4BQ9H444 224 aaKnown RBP21.27■■□□□ 1
CHRNA7-227ENST00000637350 INTS3Q68E01 1043 aaKnown RBP21.27■□□□□ 0.99
CHRNA7-227ENST00000637350 BECN1Q14457 450 aa21.26■□□□□ 0.99
CHRNA7-227ENST00000637350 C22orf23Q9BZE7 217 aa21.26■□□□□ 0.99
CHRNA7-227ENST00000637350 PLEKHG2Q9H7P9 1386 aa21.25■□□□□ 0.99
CHRNA7-227ENST00000637350 TATP17735 454 aaPredicted RBP21.25■□□□□ 0.99
CHRNA7-227ENST00000637350 MPRIPQ6WCQ1 1025 aa21.25■□□□□ 0.99
CHRNA7-227ENST00000637350 FRAT2O75474 233 aaPredicted RBP21.25■□□□□ 0.99
CHRNA7-227ENST00000637350 OVOS2A0A0G2JMS6 1433 aa21.25■□□□□ 0.99
CHRNA7-227ENST00000637350 TEFQ10587 303 aa21.24■□□□□ 0.99
CHRNA7-227ENST00000637350 SLKQ9H2G2 1235 aaPredicted RBP21.24■□□□□ 0.99
CHRNA7-227ENST00000637350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.24■□□□□ 0.99
CHRNA7-227ENST00000637350 N4BP2Q86UW6 1770 aaPredicted RBP21.24■□□□□ 0.99
CHRNA7-227ENST00000637350 AHDC1Q5TGY3 1603 aaPredicted RBP21.24■□□□□ 0.99
CHRNA7-227ENST00000637350 RNMTO43148 476 aaKnown RBP21.23■□□□□ 0.99
CHRNA7-227ENST00000637350 SOS1Q07889 1333 aaPredicted RBP21.23■□□□□ 0.99
CHRNA7-227ENST00000637350 WDR17Q8IZU2 1322 aa21.23■□□□□ 0.99
CHRNA7-227ENST00000637350 MEGF6O75095 1541 aa21.23■□□□□ 0.99
CHRNA7-227ENST00000637350 G2E3Q7L622 706 aa21.23■□□□□ 0.99
CHRNA7-227ENST00000637350 SPG7Q9UQ90 795 aa21.23■□□□□ 0.99
CHRNA7-227ENST00000637350 BMP2KLQ5H9B9 411 aa21.22■□□□□ 0.99
CHRNA7-227ENST00000637350 BCL11AQ9H165 835 aa21.22■□□□□ 0.99
CHRNA7-227ENST00000637350 ANTXR1Q9H6X2 564 aa21.22■□□□□ 0.99
CHRNA7-227ENST00000637350 CACNA1FO60840 1977 aa21.22■□□□□ 0.99
CHRNA7-227ENST00000637350 COL5A2P05997 1499 aaPredicted RBP21.22■□□□□ 0.99
CHRNA7-227ENST00000637350 PTPRCP08575 1304 aa21.21■□□□□ 0.99
CHRNA7-227ENST00000637350 SLC4A2P04920 1241 aa21.21■□□□□ 0.99
CHRNA7-227ENST00000637350 MEIS3Q99687 375 aa21.2■□□□□ 0.98
CHRNA7-227ENST00000637350 KDM3BQ7LBC6 1761 aa21.2■□□□□ 0.98
CHRNA7-227ENST00000637350 TOM1L2Q6ZVM7 507 aa21.2■□□□□ 0.98
CHRNA7-227ENST00000637350 ADAMTS7Q9UKP4 1686 aa21.19■□□□□ 0.98
CHRNA7-227ENST00000637350 BTBD11A6QL63 1104 aa21.19■□□□□ 0.98
CHRNA7-227ENST00000637350 CEP85Q6P2H3 762 aa21.18■□□□□ 0.98
CHRNA7-227ENST00000637350 ANKRD44Q8N8A2 993 aa21.18■□□□□ 0.98
CHRNA7-227ENST00000637350 F6X3S4 739 aa21.17■□□□□ 0.98
CHRNA7-227ENST00000637350 CCDC30Q5VVM6 783 aa21.17■□□□□ 0.98
CHRNA7-227ENST00000637350 STK31Q9BXU1 1019 aa21.17■□□□□ 0.98
CHRNA7-227ENST00000637350 DCTPP1Q9H773 170 aa21.17■□□□□ 0.98
CHRNA7-227ENST00000637350 PKD1L3Q7Z443 1732 aa21.17■□□□□ 0.98
CHRNA7-227ENST00000637350 PHKG2P15735 406 aa21.17■□□□□ 0.98
CHRNA7-227ENST00000637350 EIF4A1P60842 406 aaKnown RBP21.17■□□□□ 0.98
CHRNA7-227ENST00000637350 IFNL2Q8IZJ0 200 aa21.17■□□□□ 0.98
CHRNA7-227ENST00000637350 GSPT1P15170 499 aaKnown RBP21.16■□□□□ 0.98
CHRNA7-227ENST00000637350 SIPA1L3O60292 1781 aaPredicted RBP21.15■□□□□ 0.98
CHRNA7-227ENST00000637350 SCN11AQ9UI33 1791 aa21.15■□□□□ 0.98
CHRNA7-227ENST00000637350 SPRYD3Q8NCJ5 442 aa21.15■□□□□ 0.98
CHRNA7-227ENST00000637350 CARD10Q9BWT7 1032 aa21.15■□□□□ 0.98
CHRNA7-227ENST00000637350 COL22A1Q8NFW1 1626 aaPredicted RBP21.15■□□□□ 0.98
CHRNA7-227ENST00000637350 EVA1CP58658 441 aa21.14■□□□□ 0.98
CHRNA7-227ENST00000637350 TBC1D9Q6ZT07 1266 aa21.14■□□□□ 0.98
CHRNA7-227ENST00000637350 HOXB7P09629 217 aa21.14■□□□□ 0.97
CHRNA7-227ENST00000637350 RBM25P49756 843 aaKnown RBP21.14■□□□□ 0.97
CHRNA7-227ENST00000637350 PLEKHM2Q8IWE5 1019 aa21.14■□□□□ 0.97
CHRNA7-227ENST00000637350 STRN4Q9NRL3 753 aa21.14■□□□□ 0.97
CHRNA7-227ENST00000637350 PARP4Q9UKK3 1724 aaKnown RBP21.14■□□□□ 0.97
CHRNA7-227ENST00000637350 TUBGCP6Q96RT7 1819 aa21.13■□□□□ 0.97
CHRNA7-227ENST00000637350 C16orf71Q8IYS4 520 aaPredicted RBP21.13■□□□□ 0.97
CHRNA7-227ENST00000637350 OTUD7AQ8TE49 926 aaPredicted RBP21.13■□□□□ 0.97
CHRNA7-227ENST00000637350 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
CHRNA7-227ENST00000637350 CYP27B1O15528 508 aa21.13■□□□□ 0.97
CHRNA7-227ENST00000637350 TOM1O60784 492 aa21.13■□□□□ 0.97
CHRNA7-227ENST00000637350 KCNQ3O43525 872 aa21.12■□□□□ 0.97
CHRNA7-227ENST00000637350 LARP1Q6PKG0 1096 aaKnown RBP21.12■□□□□ 0.97
CHRNA7-227ENST00000637350 SLC4A10Q6U841 1118 aa21.12■□□□□ 0.97
CHRNA7-227ENST00000637350 NECTIN2Q92692 538 aa21.12■□□□□ 0.97
CHRNA7-227ENST00000637350 CHMP4AQ9BY43 222 aa21.12■□□□□ 0.97
CHRNA7-227ENST00000637350 HDGFL1Q5TGJ6 251 aa21.12■□□□□ 0.97
CHRNA7-227ENST00000637350 DCAF5Q96JK2 942 aa21.12■□□□□ 0.97
CHRNA7-227ENST00000637350 PHLPP1O60346 1717 aa21.11■□□□□ 0.97
CHRNA7-227ENST00000637350 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
CHRNA7-227ENST00000637350 RPAP2Q8IXW5 612 aaPredicted RBP21.11■□□□□ 0.97
CHRNA7-227ENST00000637350 SLC52A2Q9HAB3 445 aa21.11■□□□□ 0.97
CHRNA7-227ENST00000637350 COL14A1Q05707 1796 aaKnown RBP21.1■□□□□ 0.97
CHRNA7-227ENST00000637350 SMARCA5O60264 1052 aaPredicted RBP21.1■□□□□ 0.97
CHRNA7-227ENST00000637350 GSE1Q14687 1217 aa21.1■□□□□ 0.97
CHRNA7-227ENST00000637350 KIF2CQ99661 725 aa21.1■□□□□ 0.97
CHRNA7-227ENST00000637350 BTG4Q9NY30 223 aa21.1■□□□□ 0.97
CHRNA7-227ENST00000637350 IL2RBP14784 551 aa21.09■□□□□ 0.97
CHRNA7-227ENST00000637350 APBB1O00213 710 aa21.09■□□□□ 0.97
CHRNA7-227ENST00000637350 ZCRB1Q8TBF4 217 aaKnown RBP21.09■□□□□ 0.97
CHRNA7-227ENST00000637350 COL16A1Q07092 1604 aaPredicted RBP21.09■□□□□ 0.97
CHRNA7-227ENST00000637350 FLIIQ13045 1269 aa21.08■□□□□ 0.97
CHRNA7-227ENST00000637350 PCDH11XQ9BZA7 1347 aa21.08■□□□□ 0.97
CHRNA7-227ENST00000637350 PCDH11YQ9BZA8 1340 aa21.08■□□□□ 0.97
CHRNA7-227ENST00000637350 TTC22Q5TAA0 569 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms