RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 TWISTNBQ3B726 338 aaPredicted RBP19.74■□□□□ 0.75
CLN6-219ENST00000637329 PDE3AQ14432 1141 aa19.73■□□□□ 0.75
CLN6-219ENST00000637329 DCAF5Q96JK2 942 aa19.73■□□□□ 0.75
CLN6-219ENST00000637329 SMC4Q9NTJ3 1288 aa19.73■□□□□ 0.75
CLN6-219ENST00000637329 VAMP4O75379 141 aa19.72■□□□□ 0.75
CLN6-219ENST00000637329 TNS2Q63HR2 1409 aa19.72■□□□□ 0.75
CLN6-219ENST00000637329 ZCRB1Q8TBF4 217 aaKnown RBP19.72■□□□□ 0.75
CLN6-219ENST00000637329 THRAP3Q9Y2W1 955 aaKnown RBP19.72■□□□□ 0.75
CLN6-219ENST00000637329 CANXP27824 592 aaKnown RBP19.71■□□□□ 0.75
CLN6-219ENST00000637329 MPRIPQ6WCQ1 1025 aa19.71■□□□□ 0.75
CLN6-219ENST00000637329 SSH1Q8WYL5 1049 aa19.71■□□□□ 0.75
CLN6-219ENST00000637329 CDCA7Q9BWT1 371 aaPredicted RBP19.71■□□□□ 0.75
CLN6-219ENST00000637329 PPP4R2Q9NY27 417 aa19.71■□□□□ 0.75
CLN6-219ENST00000637329 CYP27B1O15528 508 aa19.7■□□□□ 0.74
CLN6-219ENST00000637329 PLIN1O60240 522 aa19.7■□□□□ 0.74
CLN6-219ENST00000637329 MS4A1P11836 297 aa19.7■□□□□ 0.74
CLN6-219ENST00000637329 C8orf58Q8NAV2 365 aa19.7■□□□□ 0.74
CLN6-219ENST00000637329 LGR6Q9HBX8 967 aa19.7■□□□□ 0.74
CLN6-219ENST00000637329 TSPYL6Q8N831 410 aa19.69■□□□□ 0.74
CLN6-219ENST00000637329 SPATA31A1Q5TZJ5 1347 aa19.69■□□□□ 0.74
CLN6-219ENST00000637329 PAPPAQ13219 1627 aa19.69■□□□□ 0.74
CLN6-219ENST00000637329 HOXB7P09629 217 aa19.68■□□□□ 0.74
CLN6-219ENST00000637329 NKX1-1Q15270 411 aaPredicted RBP19.68■□□□□ 0.74
CLN6-219ENST00000637329 CHMP4AQ9BY43 222 aa19.68■□□□□ 0.74
CLN6-219ENST00000637329 ATRNO75882 1429 aa19.68■□□□□ 0.74
CLN6-219ENST00000637329 ZKSCAN2Q63HK3 967 aa19.67■□□□□ 0.74
CLN6-219ENST00000637329 GJD4Q96KN9 370 aaPredicted RBP19.67■□□□□ 0.74
CLN6-219ENST00000637329 BCL2L13Q9BXK5 485 aa19.67■□□□□ 0.74
CLN6-219ENST00000637329 SLC52A2Q9HAB3 445 aa19.67■□□□□ 0.74
CLN6-219ENST00000637329 SPATA31A5Q5VU36 1347 aa19.67■□□□□ 0.74
CLN6-219ENST00000637329 SPATA31A7Q8IWB4 1347 aa19.67■□□□□ 0.74
CLN6-219ENST00000637329 BTBD11A6QL63 1104 aa19.66■□□□□ 0.74
CLN6-219ENST00000637329 IPO8O15397 1037 aaKnown RBP19.66■□□□□ 0.74
CLN6-219ENST00000637329 BCL9LQ86UU0 1499 aa19.66■□□□□ 0.74
CLN6-219ENST00000637329 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
CLN6-219ENST00000637329 UNC5CLQ8IV45 518 aa19.65■□□□□ 0.74
CLN6-219ENST00000637329 ARHGAP45Q92619 1136 aa19.65■□□□□ 0.74
CLN6-219ENST00000637329 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
CLN6-219ENST00000637329 MIS18AQ9NYP9 233 aa19.65■□□□□ 0.74
CLN6-219ENST00000637329 AAMPQ13685 434 aa19.64■□□□□ 0.73
CLN6-219ENST00000637329 C20orf194Q5TEA3 1177 aa19.64■□□□□ 0.73
CLN6-219ENST00000637329 BARGINQ6ZT62 677 aa19.64■□□□□ 0.73
CLN6-219ENST00000637329 MRPL50Q8N5N7 158 aaKnown RBP19.64■□□□□ 0.73
CLN6-219ENST00000637329 HEG1Q9ULI3 1381 aa19.64■□□□□ 0.73
CLN6-219ENST00000637329 ERVV-2B6SEH9 535 aa19.63■□□□□ 0.73
CLN6-219ENST00000637329 EIF4A1P60842 406 aaKnown RBP19.63■□□□□ 0.73
CLN6-219ENST00000637329 ATF7IPQ6VMQ6 1270 aa19.63■□□□□ 0.73
CLN6-219ENST00000637329 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
CLN6-219ENST00000637329 CRBNQ96SW2 442 aa19.63■□□□□ 0.73
CLN6-219ENST00000637329 USP35Q9P2H5 1018 aa19.63■□□□□ 0.73
CLN6-219ENST00000637329 UBR2Q8IWV8 1755 aa19.62■□□□□ 0.73
CLN6-219ENST00000637329 ELL2O00472 640 aaPredicted RBP19.62■□□□□ 0.73
CLN6-219ENST00000637329 VPS72Q15906 364 aa19.62■□□□□ 0.73
CLN6-219ENST00000637329 KRT24Q2M2I5 525 aa19.62■□□□□ 0.73
CLN6-219ENST00000637329 LRP5O75197 1615 aa19.62■□□□□ 0.73
CLN6-219ENST00000637329 DEFB132Q7Z7B7 95 aa19.61■□□□□ 0.73
CLN6-219ENST00000637329 FTSJ3Q8IY81 847 aaKnown RBP19.61■□□□□ 0.73
CLN6-219ENST00000637329 GLI3P10071 1580 aa19.61■□□□□ 0.73
CLN6-219ENST00000637329 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
CLN6-219ENST00000637329 PTPRCP08575 1304 aa19.6■□□□□ 0.73
CLN6-219ENST00000637329 THSD7AQ9UPZ6 1657 aa19.6■□□□□ 0.73
CLN6-219ENST00000637329 TRIM27P14373 513 aa19.6■□□□□ 0.73
CLN6-219ENST00000637329 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
CLN6-219ENST00000637329 DZIP1LQ8IYY4 767 aaKnown RBP19.6■□□□□ 0.73
CLN6-219ENST00000637329 NOB1Q9ULX3 412 aaKnown RBP19.6■□□□□ 0.73
CLN6-219ENST00000637329 CACNA1FO60840 1977 aa19.6■□□□□ 0.73
CLN6-219ENST00000637329 CABP4P57796 275 aa19.59■□□□□ 0.73
CLN6-219ENST00000637329 ZNF790Q6PG37 636 aa19.58■□□□□ 0.72
CLN6-219ENST00000637329 STK31Q9BXU1 1019 aa19.58■□□□□ 0.72
CLN6-219ENST00000637329 API5Q9BZZ5 524 aaKnown RBP19.58■□□□□ 0.72
CLN6-219ENST00000637329 ABCC4O15439 1325 aa19.57■□□□□ 0.72
CLN6-219ENST00000637329 C5P01031 1676 aa19.57■□□□□ 0.72
CLN6-219ENST00000637329 EXOC5O00471 708 aa19.57■□□□□ 0.72
CLN6-219ENST00000637329 N4BP2Q86UW6 1770 aaPredicted RBP19.57■□□□□ 0.72
CLN6-219ENST00000637329 DOT1LQ8TEK3 1739 aa19.56■□□□□ 0.72
CLN6-219ENST00000637329 PXDNLA1KZ92 1463 aa19.56■□□□□ 0.72
CLN6-219ENST00000637329 MVPQ14764 893 aaKnown RBP19.56■□□□□ 0.72
CLN6-219ENST00000637329 HDGFL1Q5TGJ6 251 aa19.56■□□□□ 0.72
CLN6-219ENST00000637329 TTC5Q8N0Z6 440 aa19.56■□□□□ 0.72
CLN6-219ENST00000637329 NFATC2IPQ8NCF5 419 aa19.56■□□□□ 0.72
CLN6-219ENST00000637329 DDX54Q8TDD1 881 aaKnown RBP19.56■□□□□ 0.72
CLN6-219ENST00000637329 PANK1Q8TE04 598 aa19.56■□□□□ 0.72
CLN6-219ENST00000637329 KCPQ6ZWJ8 1503 aa19.56■□□□□ 0.72
CLN6-219ENST00000637329 BAG6P46379 1132 aa19.55■□□□□ 0.72
CLN6-219ENST00000637329 CCDC136Q96JN2 1154 aa19.55■□□□□ 0.72
CLN6-219ENST00000637329 RLBP1P12271 317 aa19.54■□□□□ 0.72
CLN6-219ENST00000637329 DDB1Q16531 1140 aa19.54■□□□□ 0.72
CLN6-219ENST00000637329 DDX19BQ9UMR2 479 aa19.54■□□□□ 0.72
CLN6-219ENST00000637329 CCDC9Q9Y3X0 531 aaKnown RBP19.54■□□□□ 0.72
CLN6-219ENST00000637329 ITGB4P16144 1822 aa19.53■□□□□ 0.72
CLN6-219ENST00000637329 PSDA5PKW4 1024 aaPredicted RBP19.53■□□□□ 0.72
CLN6-219ENST00000637329 KCNQ3O43525 872 aa19.53■□□□□ 0.72
CLN6-219ENST00000637329 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
CLN6-219ENST00000637329 COG6Q9Y2V7 657 aa19.53■□□□□ 0.72
CLN6-219ENST00000637329 YY1P25490 414 aa19.52■□□□□ 0.72
CLN6-219ENST00000637329 CLUAP1Q96AJ1 413 aa19.52■□□□□ 0.72
CLN6-219ENST00000637329 FMNL2Q96PY5 1086 aa19.52■□□□□ 0.72
CLN6-219ENST00000637329 CHMP4BQ9H444 224 aaKnown RBP19.52■□□□□ 0.72
CLN6-219ENST00000637329 TNNQ9UQP3 1299 aa19.52■□□□□ 0.72
CLN6-219ENST00000637329 BCL9O00512 1426 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms