RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 NWD2Q9ULI1 1742 aa27.1■■□□□ 1.93
CLN8-213ENST00000637156 EXOC5O00471 708 aa27.09■■□□□ 1.93
CLN8-213ENST00000637156 TCERG1O14776 1098 aaKnown RBP27.08■■□□□ 1.93
CLN8-213ENST00000637156 BRPF1P55201 1214 aaPredicted RBP27.08■■□□□ 1.93
CLN8-213ENST00000637156 EIF4A1P60842 406 aaKnown RBP27.08■■□□□ 1.93
CLN8-213ENST00000637156 VPS72Q15906 364 aa27.08■■□□□ 1.93
CLN8-213ENST00000637156 USP21Q9UK80 565 aa27.08■■□□□ 1.93
CLN8-213ENST00000637156 CDCA7Q9BWT1 371 aaPredicted RBP27.08■■□□□ 1.93
CLN8-213ENST00000637156 MEX3CQ5U5Q3 659 aaKnown RBP27.07■■□□□ 1.92
CLN8-213ENST00000637156 BARGINQ6ZT62 677 aa27.07■■□□□ 1.92
CLN8-213ENST00000637156 MRPL50Q8N5N7 158 aaKnown RBP27.06■■□□□ 1.92
CLN8-213ENST00000637156 EXOC6Q8TAG9 804 aa27.06■■□□□ 1.92
CLN8-213ENST00000637156 NOB1Q9ULX3 412 aaKnown RBP27.06■■□□□ 1.92
CLN8-213ENST00000637156 CABP4P57796 275 aa27.05■■□□□ 1.92
CLN8-213ENST00000637156 CANXP27824 592 aaKnown RBP27.04■■□□□ 1.92
CLN8-213ENST00000637156 PDE3AQ14432 1141 aa27.04■■□□□ 1.92
CLN8-213ENST00000637156 TNNQ9UQP3 1299 aa27.04■■□□□ 1.92
CLN8-213ENST00000637156 ERVV-2B6SEH9 535 aa27.04■■□□□ 1.92
CLN8-213ENST00000637156 CRBNQ96SW2 442 aa27.04■■□□□ 1.92
CLN8-213ENST00000637156 SCN11AQ9UI33 1791 aa27.03■■□□□ 1.92
CLN8-213ENST00000637156 SLC39A6Q13433 755 aa27.03■■□□□ 1.92
CLN8-213ENST00000637156 ZKSCAN2Q63HK3 967 aa27.02■■□□□ 1.92
CLN8-213ENST00000637156 ZNF790Q6PG37 636 aa27.02■■□□□ 1.92
CLN8-213ENST00000637156 SHANK3Q9BYB0 1731 aa27.02■■□□□ 1.92
CLN8-213ENST00000637156 DDB1Q16531 1140 aa27.01■■□□□ 1.91
CLN8-213ENST00000637156 PANK1Q8TE04 598 aa27.01■■□□□ 1.91
CLN8-213ENST00000637156 VIRMAQ69YN4 1812 aaKnown RBP27.01■■□□□ 1.91
CLN8-213ENST00000637156 AFF2P51816 1311 aa27■■□□□ 1.91
CLN8-213ENST00000637156 SOS1Q07889 1333 aaPredicted RBP27■■□□□ 1.91
CLN8-213ENST00000637156 RLBP1P12271 317 aa27■■□□□ 1.91
CLN8-213ENST00000637156 FAM98CQ17RN3 349 aaKnown RBP27■■□□□ 1.91
CLN8-213ENST00000637156 PPP4R2Q9NY27 417 aa27■■□□□ 1.91
CLN8-213ENST00000637156 HEG1Q9ULI3 1381 aa26.99■■□□□ 1.91
CLN8-213ENST00000637156 TRIM27P14373 513 aa26.99■■□□□ 1.91
CLN8-213ENST00000637156 ATF7IPQ6VMQ6 1270 aa26.99■■□□□ 1.91
CLN8-213ENST00000637156 CLUAP1Q96AJ1 413 aa26.99■■□□□ 1.91
CLN8-213ENST00000637156 SIPA1L3O60292 1781 aaPredicted RBP26.99■■□□□ 1.91
CLN8-213ENST00000637156 MRC1P22897 1456 aa26.99■■□□□ 1.91
CLN8-213ENST00000637156 KIF16BQ96L93 1317 aa26.99■■□□□ 1.91
CLN8-213ENST00000637156 IPO8O15397 1037 aaKnown RBP26.98■■□□□ 1.91
CLN8-213ENST00000637156 GIGYF1O75420 1035 aaPredicted RBP26.98■■□□□ 1.91
CLN8-213ENST00000637156 KDM3BQ7LBC6 1761 aa26.97■■□□□ 1.91
CLN8-213ENST00000637156 SLC4A2P04920 1241 aa26.97■■□□□ 1.91
CLN8-213ENST00000637156 ARHGAP45Q92619 1136 aa26.96■■□□□ 1.91
CLN8-213ENST00000637156 NECTIN2Q92692 538 aa26.96■■□□□ 1.91
CLN8-213ENST00000637156 HOXB7P09629 217 aa26.96■■□□□ 1.91
CLN8-213ENST00000637156 TNS2Q63HR2 1409 aa26.95■■□□□ 1.91
CLN8-213ENST00000637156 CCDC30Q5VVM6 783 aa26.95■■□□□ 1.9
CLN8-213ENST00000637156 DZIP1LQ8IYY4 767 aaKnown RBP26.95■■□□□ 1.9
CLN8-213ENST00000637156 MARCH10Q8NA82 808 aaPredicted RBP26.95■■□□□ 1.9
CLN8-213ENST00000637156 PRAMEF22A3QJZ6 481 aa26.94■■□□□ 1.9
CLN8-213ENST00000637156 ZNF496Q96IT1 587 aaPredicted RBP26.94■■□□□ 1.9
CLN8-213ENST00000637156 COG6Q9Y2V7 657 aa26.94■■□□□ 1.9
CLN8-213ENST00000637156 GJD4Q96KN9 370 aaPredicted RBP26.93■■□□□ 1.9
CLN8-213ENST00000637156 EIF2S2P20042 333 aaKnown RBP26.93■■□□□ 1.9
CLN8-213ENST00000637156 HDGFL1Q5TGJ6 251 aa26.93■■□□□ 1.9
CLN8-213ENST00000637156 TTC5Q8N0Z6 440 aa26.92■■□□□ 1.9
CLN8-213ENST00000637156 PIGBQ92521 554 aa26.91■■□□□ 1.9
CLN8-213ENST00000637156 WNK3Q9BYP7 1800 aa26.91■■□□□ 1.9
CLN8-213ENST00000637156 MS4A1P11836 297 aa26.91■■□□□ 1.9
CLN8-213ENST00000637156 TMOD3Q9NYL9 352 aa26.91■■□□□ 1.9
CLN8-213ENST00000637156 B4GALNT3Q6L9W6 998 aa26.9■■□□□ 1.9
CLN8-213ENST00000637156 G2E3Q7L622 706 aa26.9■■□□□ 1.9
CLN8-213ENST00000637156 FTSJ3Q8IY81 847 aaKnown RBP26.9■■□□□ 1.9
CLN8-213ENST00000637156 STK31Q9BXU1 1019 aa26.9■■□□□ 1.9
CLN8-213ENST00000637156 TRPC5Q9UL62 973 aaPredicted RBP26.9■■□□□ 1.9
CLN8-213ENST00000637156 FMNL2Q96PY5 1086 aa26.88■■□□□ 1.89
CLN8-213ENST00000637156 QTRT2Q9H974 415 aaKnown RBP26.88■■□□□ 1.89
CLN8-213ENST00000637156 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.88■■□□□ 1.89
CLN8-213ENST00000637156 ATRNO75882 1429 aa26.87■■□□□ 1.89
CLN8-213ENST00000637156 ONECUT3O60422 494 aaPredicted RBP26.87■■□□□ 1.89
CLN8-213ENST00000637156 PRIM1P49642 420 aaKnown RBP26.87■■□□□ 1.89
CLN8-213ENST00000637156 CHMP4AQ9BY43 222 aa26.87■■□□□ 1.89
CLN8-213ENST00000637156 MVPQ14764 893 aaKnown RBP26.86■■□□□ 1.89
CLN8-213ENST00000637156 TMEM57Q8N5G2 664 aa26.86■■□□□ 1.89
CLN8-213ENST00000637156 TOGARAM1Q9Y4F4 1720 aa26.85■■□□□ 1.89
CLN8-213ENST00000637156 SNRPA1P09661 255 aaKnown RBP26.85■■□□□ 1.89
CLN8-213ENST00000637156 API5Q9BZZ5 524 aaKnown RBP26.85■■□□□ 1.89
CLN8-213ENST00000637156 PTPRCP08575 1304 aa26.85■■□□□ 1.89
CLN8-213ENST00000637156 CHPF2Q9P2E5 772 aa26.85■■□□□ 1.89
CLN8-213ENST00000637156 ASAP1Q9ULH1 1129 aa26.85■■□□□ 1.89
CLN8-213ENST00000637156 USP16Q9Y5T5 823 aa26.85■■□□□ 1.89
CLN8-213ENST00000637156 FBXO41Q8TF61 875 aa26.84■■□□□ 1.89
CLN8-213ENST00000637156 A0A0G2JS52 829 aa26.83■■□□□ 1.89
CLN8-213ENST00000637156 MYT1Q01538 1121 aa26.83■■□□□ 1.89
CLN8-213ENST00000637156 SYTL4Q96C24 671 aaPredicted RBP26.83■■□□□ 1.89
CLN8-213ENST00000637156 ATG3Q9NT62 314 aa26.83■■□□□ 1.89
CLN8-213ENST00000637156 FLIIQ13045 1269 aa26.83■■□□□ 1.88
CLN8-213ENST00000637156 CCDC136Q96JN2 1154 aa26.83■■□□□ 1.88
CLN8-213ENST00000637156 PHAXQ9H814 394 aaKnown RBP26.83■■□□□ 1.88
CLN8-213ENST00000637156 BCL9O00512 1426 aa26.83■■□□□ 1.88
CLN8-213ENST00000637156 PTCD1O75127 700 aaKnown RBP26.82■■□□□ 1.88
CLN8-213ENST00000637156 GLI3P10071 1580 aa26.82■■□□□ 1.88
CLN8-213ENST00000637156 ABCC4O15439 1325 aa26.81■■□□□ 1.88
CLN8-213ENST00000637156 ACSBG1Q96GR2 724 aa26.81■■□□□ 1.88
CLN8-213ENST00000637156 DBF4Q9UBU7 674 aaPredicted RBP26.81■■□□□ 1.88
CLN8-213ENST00000637156 ANXA1P04083 346 aa26.81■■□□□ 1.88
CLN8-213ENST00000637156 ITPRIPQ8IWB1 547 aa26.81■■□□□ 1.88
CLN8-213ENST00000637156 RGS12O14924 1447 aa26.8■■□□□ 1.88
CLN8-213ENST00000637156 PDIA6Q15084 440 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms