RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
SMARCA2-258ENST00000637103 FEZ1Q99689 392 aa13.16□□□□□ -0.3
SMARCA2-258ENST00000637103 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
SMARCA2-258ENST00000637103 AACSQ86V21 672 aa13.16□□□□□ -0.3
SMARCA2-258ENST00000637103 BMP2KLQ5H9B9 411 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 USO1O60763 962 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 CCDC175P0C221 793 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 NAA15Q9BXJ9 866 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 SRRTQ9BXP5 876 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 OGFRQ9NZT2 677 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 IFFO1Q0D2I5 559 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
SMARCA2-258ENST00000637103 GPRASP1Q5JY77 1395 aa13.15□□□□□ -0.31
SMARCA2-258ENST00000637103 ABCC11Q96J66 1382 aa13.15□□□□□ -0.31
SMARCA2-258ENST00000637103 YEATS4O95619 227 aa13.15□□□□□ -0.31
SMARCA2-258ENST00000637103 RBM27Q9P2N5 1060 aaKnown RBP13.15□□□□□ -0.31
SMARCA2-258ENST00000637103 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
SMARCA2-258ENST00000637103 CKAP2LQ8IYA6 745 aa13.14□□□□□ -0.31
SMARCA2-258ENST00000637103 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
SMARCA2-258ENST00000637103 BMP2KQ9NSY1 1161 aaPredicted RBP13.14□□□□□ -0.31
SMARCA2-258ENST00000637103 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
SMARCA2-258ENST00000637103 PTPRGP23470 1445 aa13.14□□□□□ -0.31
SMARCA2-258ENST00000637103 FKBP15Q5T1M5 1219 aa13.14□□□□□ -0.31
SMARCA2-258ENST00000637103 ARFGAP3Q9NP61 516 aa13.14□□□□□ -0.31
SMARCA2-258ENST00000637103 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 SRGAP3O43295 1099 aa13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 STX6O43752 255 aa13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 FCHSD2O94868 740 aa13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 ZNF165P49910 485 aa13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 TIAM1Q13009 1591 aa13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
SMARCA2-258ENST00000637103 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 SNX21Q969T3 373 aa13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 TTC31Q49AM3 519 aaPredicted RBP13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 KIF1BPQ96EK5 621 aa13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 ALS2CR12Q96Q35 445 aa13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 KIF20AO95235 890 aa13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 SLU7O95391 586 aaKnown RBP13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 EVA1CP58658 441 aa13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 CFAP70Q5T0N1 1121 aa13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 EHBP1Q8NDI1 1231 aa13.12□□□□□ -0.31
SMARCA2-258ENST00000637103 CFTRP13569 1480 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 HSPA4P34932 840 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 TUBB4BP68371 445 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 CCDC113Q9H0I3 377 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 TBC1D9Q6ZT07 1266 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 NUP88Q99567 741 aaPredicted RBP13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 FSIP1Q8NA03 581 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 HSF2BPO75031 334 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 TMPOP42166 694 aaKnown RBP13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 PSME1Q06323 249 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 IL1RAPL2Q9NP60 686 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 RSPH14Q9UHP6 348 aa13.11□□□□□ -0.31
SMARCA2-258ENST00000637103 GNG11P61952 73 aa13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 CCDC12Q8WUD4 166 aaPredicted RBP13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 NUP133Q8WUM0 1156 aa13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 TERF1P54274 439 aa13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 NFE2L2Q16236 605 aa13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 GNL3LQ9NVN8 582 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-258ENST00000637103 FGFR1OPO95684 399 aaKnown RBP13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 GJB2P29033 226 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 CCDC178Q5BJE1 867 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 FAM200AQ8TCP9 573 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 RASSF4Q9H2L5 321 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 BCCIPQ9P287 314 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 NCOA1Q15788 1441 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 CETN2P41208 172 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 CEP112Q8N8E3 955 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 C8orf76Q96K31 380 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 SIL1Q9H173 461 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 FGD5Q6ZNL6 1462 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 TMEM132EQ6IEE7 984 aa13.09□□□□□ -0.31
SMARCA2-258ENST00000637103 SKILP12757 684 aa13.08□□□□□ -0.31
SMARCA2-258ENST00000637103 PRDM2Q13029 1718 aa13.08□□□□□ -0.31
SMARCA2-258ENST00000637103 DUSP27Q5VZP5 1158 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 UBAC1Q9BSL1 405 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 ZHX3Q9H4I2 956 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 GDPD2Q9HCC8 539 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 KIF6Q6ZMV9 814 aa13.08□□□□□ -0.32
SMARCA2-258ENST00000637103 CNNM3Q8NE01 707 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms