RNA–Protein interactions for RNA: ENST00000637078.1

CACNA1D-221, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 4

Gene CACNA1D, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-221ENST00000637078 C10orf71Q711Q0 1435 aa12.38□□□□□ -0.43
CACNA1D-221ENST00000637078 TOMM70O94826 608 aa12.38□□□□□ -0.43
CACNA1D-221ENST00000637078 MMP10P09238 476 aa12.38□□□□□ -0.43
CACNA1D-221ENST00000637078 TGFB2P61812 414 aa12.38□□□□□ -0.43
CACNA1D-221ENST00000637078 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
CACNA1D-221ENST00000637078 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
CACNA1D-221ENST00000637078 ITPK1Q13572 414 aa12.37□□□□□ -0.43
CACNA1D-221ENST00000637078 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
CACNA1D-221ENST00000637078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
CACNA1D-221ENST00000637078 ASAP1Q9ULH1 1129 aa12.37□□□□□ -0.43
CACNA1D-221ENST00000637078 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
CACNA1D-221ENST00000637078 KDRP35968 1356 aa12.36□□□□□ -0.43
CACNA1D-221ENST00000637078 PPM1GO15355 546 aaPredicted RBP12.36□□□□□ -0.43
CACNA1D-221ENST00000637078 RTCBQ9Y3I0 505 aaKnown RBP12.36□□□□□ -0.43
CACNA1D-221ENST00000637078 PLEKHG2Q9H7P9 1386 aa12.35□□□□□ -0.43
CACNA1D-221ENST00000637078 PHKG2P15735 406 aa12.35□□□□□ -0.43
CACNA1D-221ENST00000637078 NLGN1Q8N2Q7 840 aa12.35□□□□□ -0.43
CACNA1D-221ENST00000637078 CCDC87Q9NVE4 849 aa12.35□□□□□ -0.43
CACNA1D-221ENST00000637078 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
CACNA1D-221ENST00000637078 WASHC2AQ641Q2 1341 aa12.35□□□□□ -0.43
CACNA1D-221ENST00000637078 ADRA2BP18089 450 aa12.34□□□□□ -0.43
CACNA1D-221ENST00000637078 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
CACNA1D-221ENST00000637078 ARHGAP27Q6ZUM4 889 aa12.34□□□□□ -0.43
CACNA1D-221ENST00000637078 EYA1Q99502 592 aa12.34□□□□□ -0.43
CACNA1D-221ENST00000637078 ATG3Q9NT62 314 aa12.34□□□□□ -0.43
CACNA1D-221ENST00000637078 MYH14Q7Z406 1995 aaKnown RBP12.33□□□□□ -0.44
CACNA1D-221ENST00000637078 A0A0G2JLW4 131 aa12.33□□□□□ -0.44
CACNA1D-221ENST00000637078 FCHSD2O94868 740 aa12.33□□□□□ -0.44
CACNA1D-221ENST00000637078 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
CACNA1D-221ENST00000637078 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
CACNA1D-221ENST00000637078 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
CACNA1D-221ENST00000637078 CNTNAP4Q9C0A0 1308 aa12.33□□□□□ -0.44
CACNA1D-221ENST00000637078 SBF1O95248 1867 aa12.32□□□□□ -0.44
CACNA1D-221ENST00000637078 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
CACNA1D-221ENST00000637078 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
CACNA1D-221ENST00000637078 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
CACNA1D-221ENST00000637078 CARD14Q9BXL6 1004 aa12.32□□□□□ -0.44
CACNA1D-221ENST00000637078 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
CACNA1D-221ENST00000637078 GYS1P13807 737 aa12.31□□□□□ -0.44
CACNA1D-221ENST00000637078 DPEP1P16444 411 aa12.31□□□□□ -0.44
CACNA1D-221ENST00000637078 RFC4P35249 363 aa12.31□□□□□ -0.44
CACNA1D-221ENST00000637078 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
CACNA1D-221ENST00000637078 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
CACNA1D-221ENST00000637078 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
CACNA1D-221ENST00000637078 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
CACNA1D-221ENST00000637078 C9orf131Q5VYM1 1079 aa12.3□□□□□ -0.44
CACNA1D-221ENST00000637078 TJP1Q07157 1748 aa12.3□□□□□ -0.44
CACNA1D-221ENST00000637078 KCPQ6ZWJ8 1503 aa12.3□□□□□ -0.44
CACNA1D-221ENST00000637078 KDM2BQ8NHM5 1336 aa12.3□□□□□ -0.44
CACNA1D-221ENST00000637078 FSTL1Q12841 308 aa12.29□□□□□ -0.44
CACNA1D-221ENST00000637078 KLRG1Q96E93 195 aa12.29□□□□□ -0.44
CACNA1D-221ENST00000637078 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
CACNA1D-221ENST00000637078 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
CACNA1D-221ENST00000637078 PIM2Q9P1W9 311 aa12.29□□□□□ -0.44
CACNA1D-221ENST00000637078 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
CACNA1D-221ENST00000637078 EIF4A2Q14240 407 aaKnown RBP12.28□□□□□ -0.44
CACNA1D-221ENST00000637078 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
CACNA1D-221ENST00000637078 RNF181Q9P0P0 153 aa12.27□□□□□ -0.45
CACNA1D-221ENST00000637078 SCN11AQ9UI33 1791 aa12.27□□□□□ -0.45
CACNA1D-221ENST00000637078 DLEC1Q9Y238 1755 aa12.27□□□□□ -0.45
CACNA1D-221ENST00000637078 VIRMAQ69YN4 1812 aaKnown RBP12.26□□□□□ -0.45
CACNA1D-221ENST00000637078 KCNA3P22001 575 aa12.26□□□□□ -0.45
CACNA1D-221ENST00000637078 CABP4P57796 275 aa12.26□□□□□ -0.45
CACNA1D-221ENST00000637078 PLEKHO1Q53GL0 409 aaPredicted RBP12.26□□□□□ -0.45
CACNA1D-221ENST00000637078 DALRD3Q5D0E6 543 aaKnown RBP12.26□□□□□ -0.45
CACNA1D-221ENST00000637078 JMYQ8N9B5 988 aa12.26□□□□□ -0.45
CACNA1D-221ENST00000637078 ADAMTS7Q9UKP4 1686 aa12.26□□□□□ -0.45
CACNA1D-221ENST00000637078 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
CACNA1D-221ENST00000637078 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
CACNA1D-221ENST00000637078 CCDC88AQ3V6T2 1871 aa12.25□□□□□ -0.45
CACNA1D-221ENST00000637078 HTRA3P83110 453 aa12.25□□□□□ -0.45
CACNA1D-221ENST00000637078 ZNF530Q6P9A1 599 aaPredicted RBP12.25□□□□□ -0.45
CACNA1D-221ENST00000637078 USP42Q9H9J4 1324 aaKnown RBP12.25□□□□□ -0.45
CACNA1D-221ENST00000637078 TNNT2P45379 298 aaPredicted RBP12.24□□□□□ -0.45
CACNA1D-221ENST00000637078 CRKLP46109 303 aaKnown RBP12.24□□□□□ -0.45
CACNA1D-221ENST00000637078 AMOTQ4VCS5 1084 aa12.24□□□□□ -0.45
CACNA1D-221ENST00000637078 C1orf141Q5JVX7 400 aa12.24□□□□□ -0.45
CACNA1D-221ENST00000637078 SMC1BQ8NDV3 1235 aa12.24□□□□□ -0.45
CACNA1D-221ENST00000637078 ZC3H4Q9UPT8 1303 aaKnown RBP12.24□□□□□ -0.45
CACNA1D-221ENST00000637078 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
CACNA1D-221ENST00000637078 PTCD1O75127 700 aaKnown RBP12.23□□□□□ -0.45
CACNA1D-221ENST00000637078 DDR1Q08345 913 aa12.23□□□□□ -0.45
CACNA1D-221ENST00000637078 FKBP8Q14318 412 aa12.23□□□□□ -0.45
CACNA1D-221ENST00000637078 COL13A1Q5TAT6 717 aaPredicted RBP12.23□□□□□ -0.45
CACNA1D-221ENST00000637078 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
CACNA1D-221ENST00000637078 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
CACNA1D-221ENST00000637078 CHRNA5P30532 468 aa12.22□□□□□ -0.45
CACNA1D-221ENST00000637078 MTHFSP49914 203 aa12.22□□□□□ -0.45
CACNA1D-221ENST00000637078 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
CACNA1D-221ENST00000637078 ZPR1O75312 459 aa12.2□□□□□ -0.46
CACNA1D-221ENST00000637078 TNS4Q8IZW8 715 aa12.2□□□□□ -0.46
CACNA1D-221ENST00000637078 POLR3GLQ9BT43 218 aa12.2□□□□□ -0.46
CACNA1D-221ENST00000637078 DICER1Q9UPY3 1922 aaKnown RBP12.19□□□□□ -0.46
CACNA1D-221ENST00000637078 CAPN15O75808 1086 aa12.19□□□□□ -0.46
CACNA1D-221ENST00000637078 RASSF7Q02833 373 aa12.19□□□□□ -0.46
CACNA1D-221ENST00000637078 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
CACNA1D-221ENST00000637078 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
CACNA1D-221ENST00000637078 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
CACNA1D-221ENST00000637078 TM4SF1P30408 202 aa12.18□□□□□ -0.46
CACNA1D-221ENST00000637078 MRC1P22897 1456 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms