RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 CA8P35219 290 aa8.45□□□□□ -1.06
CLN5-210ENST00000636520 TMC4Q7Z404 712 aa8.45□□□□□ -1.06
CLN5-210ENST00000636520 ANKRD2Q9GZV1 360 aa8.45□□□□□ -1.06
CLN5-210ENST00000636520 MAST3O60307 1309 aa8.45□□□□□ -1.06
CLN5-210ENST00000636520 IFIT5Q13325 482 aaKnown RBP8.45□□□□□ -1.06
CLN5-210ENST00000636520 LRP2BPQ9P2M1 347 aa8.45□□□□□ -1.06
CLN5-210ENST00000636520 NBPF15Q8N660 670 aa8.45□□□□□ -1.06
CLN5-210ENST00000636520 UBXN2AP68543 259 aa8.44□□□□□ -1.06
CLN5-210ENST00000636520 RTL5Q5HYW3 569 aaPredicted RBP8.44□□□□□ -1.06
CLN5-210ENST00000636520 DNAJC2Q99543 621 aaKnown RBP8.44□□□□□ -1.06
CLN5-210ENST00000636520 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
CLN5-210ENST00000636520 SLC12A5Q9H2X9 1139 aa8.44□□□□□ -1.06
CLN5-210ENST00000636520 PLEKHG1Q9ULL1 1385 aa8.44□□□□□ -1.06
CLN5-210ENST00000636520 RRS1Q15050 365 aaKnown RBP8.44□□□□□ -1.06
CLN5-210ENST00000636520 GPTP24298 496 aa8.44□□□□□ -1.06
CLN5-210ENST00000636520 NINLQ9Y2I6 1382 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 POLR3DP05423 398 aaPredicted RBP8.43□□□□□ -1.06
CLN5-210ENST00000636520 AKAP4Q5JQC9 854 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 MPNDQ8N594 471 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 SH2D4AQ9H788 454 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 SLC5A1P13866 664 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 ADRA2BP18089 450 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 USP5P45974 858 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 TNPO1Q92973 898 aaKnown RBP8.43□□□□□ -1.06
CLN5-210ENST00000636520 UBTFL1P0CB47 393 aaPredicted RBP8.43□□□□□ -1.06
CLN5-210ENST00000636520 IBSPP21815 317 aaPredicted RBP8.43□□□□□ -1.06
CLN5-210ENST00000636520 DLGAP5Q15398 846 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 AKAP2Q9Y2D5 859 aa8.43□□□□□ -1.06
CLN5-210ENST00000636520 SHANK2Q9UPX8 1470 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 FMNL1O95466 1100 aaPredicted RBP8.42□□□□□ -1.06
CLN5-210ENST00000636520 METTL24Q5JXM2 366 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 ELMSAN1Q6PJG2 1045 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 GNAI3P08754 354 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
CLN5-210ENST00000636520 ABCF2Q9UG63 623 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 DUOX2Q9NRD8 1548 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 IRX3P78415 501 aaPredicted RBP8.42□□□□□ -1.06
CLN5-210ENST00000636520 TAF7Q15545 349 aaPredicted RBP8.42□□□□□ -1.06
CLN5-210ENST00000636520 TTC39AQ5SRH9 613 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 SLC10A4Q96EP9 437 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 PRKAR2BP31323 418 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 CCNA1P78396 465 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 ITPRIPQ8IWB1 547 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 USHBP1Q8N6Y0 703 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 RUFY2Q8WXA3 655 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 NOS1P29475 1434 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 RUSC2Q8N2Y8 1516 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 MMP10P09238 476 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 DDX17Q92841 729 aaKnown RBP8.42□□□□□ -1.06
CLN5-210ENST00000636520 PPP2R3CQ969Q6 453 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 DRC1Q96MC2 740 aa8.42□□□□□ -1.06
CLN5-210ENST00000636520 EHMT1Q9H9B1 1298 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.41□□□□□ -1.06
CLN5-210ENST00000636520 MAPKBP1O60336 1514 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 CAMSAP2Q08AD1 1489 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 PPP4R3AQ6IN85 833 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 RAPGEF6Q8TEU7 1601 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 IP6K1Q92551 441 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 PLCG2P16885 1265 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
CLN5-210ENST00000636520 RALYLQ86SE5 291 aaKnown RBP8.41□□□□□ -1.06
CLN5-210ENST00000636520 TRIM6-TRIM34B2RNG4 842 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 ZBTB33Q86T24 672 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 NME9Q86XW9 330 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 GGA1Q9UJY5 639 aa8.41□□□□□ -1.06
CLN5-210ENST00000636520 NCOA1Q15788 1441 aa8.4□□□□□ -1.06
CLN5-210ENST00000636520 ERC1Q8IUD2 1116 aa8.4□□□□□ -1.06
CLN5-210ENST00000636520 ERC2O15083 957 aa8.4□□□□□ -1.06
CLN5-210ENST00000636520 HYPKQ9NX55 129 aa8.4□□□□□ -1.06
CLN5-210ENST00000636520 HACL1Q9UJ83 578 aa8.4□□□□□ -1.06
CLN5-210ENST00000636520 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.07
CLN5-210ENST00000636520 GOLGA6L4A6NEF3 574 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 SLC15A2Q16348 729 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 NUTM1Q86Y26 1132 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 HTATSF1O43719 755 aaKnown RBP8.39□□□□□ -1.07
CLN5-210ENST00000636520 FAM182BQ5T319 152 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 CIAPIN1Q6FI81 312 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 WDR70Q9NW82 654 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 PIK3C2GO75747 1445 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 APLP1P51693 650 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
CLN5-210ENST00000636520 ANP32BQ92688 251 aaKnown RBP8.39□□□□□ -1.07
CLN5-210ENST00000636520 KCNH4Q9UQ05 1017 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 CCDC47Q96A33 483 aaKnown RBP8.39□□□□□ -1.07
CLN5-210ENST00000636520 AS3MTQ9HBK9 375 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 MLH3Q9UHC1 1453 aa8.39□□□□□ -1.07
CLN5-210ENST00000636520 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
CLN5-210ENST00000636520 PPM1FP49593 454 aaPredicted RBP8.38□□□□□ -1.07
CLN5-210ENST00000636520 SREBF2Q12772 1141 aa8.38□□□□□ -1.07
CLN5-210ENST00000636520 SRCIN1Q9C0H9 1055 aa8.38□□□□□ -1.07
CLN5-210ENST00000636520 XBP1P17861 261 aa8.38□□□□□ -1.07
CLN5-210ENST00000636520 CLASRPQ8N2M8 674 aaKnown RBP8.38□□□□□ -1.07
CLN5-210ENST00000636520 SPATA31A3Q5VYP0 1347 aa8.38□□□□□ -1.07
CLN5-210ENST00000636520 NFXL1Q6ZNB6 911 aa8.38□□□□□ -1.07
CLN5-210ENST00000636520 ERCC6L2Q5T890 1561 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 CCDC129Q6ZRS4 1044 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 DPF3Q92784 378 aa8.37□□□□□ -1.07
CLN5-210ENST00000636520 DBF4Q9UBU7 674 aaPredicted RBP8.37□□□□□ -1.07
CLN5-210ENST00000636520 TRIM29Q14134 588 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms